BLASTX nr result

ID: Cnidium21_contig00006862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006862
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19405.3| unnamed protein product [Vitis vinifera]              249   3e-64
ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation prot...   249   3e-64
pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant gi|414...   249   5e-64
pdb|4DNP|A Chain A, Crystal Structure Of Dad2                         249   5e-64
gb|AFR68698.1| DAD2 [Petunia x hybrida]                               249   5e-64

>emb|CBI19405.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score =  249 bits (637), Expect = 3e-64
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = -1

Query: 698 RFLNDPEYHGGFEQGEIDKVFSALEANYEAWVNGFAPLAVGADVPVAVREFSRTLFNMRP 519
           RFLND +YHGGFE+GEI+KVFSA+EANY+AWV+GFAPL+VGADVP AVREFSRTLFNMRP
Sbjct: 25  RFLNDHDYHGGFEEGEIEKVFSAMEANYDAWVHGFAPLSVGADVPAAVREFSRTLFNMRP 84

Query: 518 DISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPASVTTYLKNHLGGRNTVVMLNI 339
           DI+LFVSRT+FNSDLRGVLGLVKVPCCIIQTAKDVSVP SV  YLKNHLGGRNTV MLN+
Sbjct: 85  DITLFVSRTIFNSDLRGVLGLVKVPCCIIQTAKDVSVPTSVALYLKNHLGGRNTVEMLNV 144

Query: 338 EGHFPHLRAPGLLAQELLRALSR 270
           EGH PHL AP LLA  L RALSR
Sbjct: 145 EGHLPHLSAPMLLAPVLRRALSR 167


>ref|XP_002285308.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera]
          Length = 266

 Score =  249 bits (637), Expect = 3e-64
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = -1

Query: 698 RFLNDPEYHGGFEQGEIDKVFSALEANYEAWVNGFAPLAVGADVPVAVREFSRTLFNMRP 519
           RFLND +YHGGFE+GEI+KVFSA+EANY+AWV+GFAPL+VGADVP AVREFSRTLFNMRP
Sbjct: 124 RFLNDHDYHGGFEEGEIEKVFSAMEANYDAWVHGFAPLSVGADVPAAVREFSRTLFNMRP 183

Query: 518 DISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPASVTTYLKNHLGGRNTVVMLNI 339
           DI+LFVSRT+FNSDLRGVLGLVKVPCCIIQTAKDVSVP SV  YLKNHLGGRNTV MLN+
Sbjct: 184 DITLFVSRTIFNSDLRGVLGLVKVPCCIIQTAKDVSVPTSVALYLKNHLGGRNTVEMLNV 243

Query: 338 EGHFPHLRAPGLLAQELLRALSR 270
           EGH PHL AP LLA  L RALSR
Sbjct: 244 EGHLPHLSAPMLLAPVLRRALSR 266


>pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant
           gi|414145490|pdb|4DNQ|B Chain B, Crystal Structure Of
           Dad2 S96a Mutant gi|414145491|pdb|4DNQ|C Chain C,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145492|pdb|4DNQ|D Chain D, Crystal Structure Of
           Dad2 S96a Mutant gi|414145493|pdb|4DNQ|E Chain E,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145494|pdb|4DNQ|F Chain F, Crystal Structure Of
           Dad2 S96a Mutant gi|414145495|pdb|4DNQ|G Chain G,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145496|pdb|4DNQ|H Chain H, Crystal Structure Of
           Dad2 S96a Mutant gi|414145497|pdb|4DNQ|I Chain I,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145498|pdb|4DNQ|J Chain J, Crystal Structure Of
           Dad2 S96a Mutant gi|414145499|pdb|4DNQ|K Chain K,
           Crystal Structure Of Dad2 S96a Mutant
           gi|414145500|pdb|4DNQ|L Chain L, Crystal Structure Of
           Dad2 S96a Mutant
          Length = 269

 Score =  249 bits (635), Expect = 5e-64
 Identities = 123/142 (86%), Positives = 130/142 (91%)
 Frame = -1

Query: 698 RFLNDPEYHGGFEQGEIDKVFSALEANYEAWVNGFAPLAVGADVPVAVREFSRTLFNMRP 519
           RFLND +YHGGFEQGEI+KVFSA+EANYEAWVNGFAPLAVGADVP AVREFSRTLFNMRP
Sbjct: 126 RFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRP 185

Query: 518 DISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPASVTTYLKNHLGGRNTVVMLNI 339
           DI+LFVSRTVFNSD+RGVLGLVKVPC I QTA+D SVPASV TYLKNHLGG+NTV  LNI
Sbjct: 186 DITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNI 245

Query: 338 EGHFPHLRAPGLLAQELLRALS 273
           EGH PHL AP LLAQEL RALS
Sbjct: 246 EGHLPHLSAPTLLAQELRRALS 267


>pdb|4DNP|A Chain A, Crystal Structure Of Dad2
          Length = 269

 Score =  249 bits (635), Expect = 5e-64
 Identities = 123/142 (86%), Positives = 130/142 (91%)
 Frame = -1

Query: 698 RFLNDPEYHGGFEQGEIDKVFSALEANYEAWVNGFAPLAVGADVPVAVREFSRTLFNMRP 519
           RFLND +YHGGFEQGEI+KVFSA+EANYEAWVNGFAPLAVGADVP AVREFSRTLFNMRP
Sbjct: 126 RFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRP 185

Query: 518 DISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPASVTTYLKNHLGGRNTVVMLNI 339
           DI+LFVSRTVFNSD+RGVLGLVKVPC I QTA+D SVPASV TYLKNHLGG+NTV  LNI
Sbjct: 186 DITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNI 245

Query: 338 EGHFPHLRAPGLLAQELLRALS 273
           EGH PHL AP LLAQEL RALS
Sbjct: 246 EGHLPHLSAPTLLAQELRRALS 267


>gb|AFR68698.1| DAD2 [Petunia x hybrida]
          Length = 267

 Score =  249 bits (635), Expect = 5e-64
 Identities = 123/142 (86%), Positives = 130/142 (91%)
 Frame = -1

Query: 698 RFLNDPEYHGGFEQGEIDKVFSALEANYEAWVNGFAPLAVGADVPVAVREFSRTLFNMRP 519
           RFLND +YHGGFEQGEI+KVFSA+EANYEAWVNGFAPLAVGADVP AVREFSRTLFNMRP
Sbjct: 124 RFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRP 183

Query: 518 DISLFVSRTVFNSDLRGVLGLVKVPCCIIQTAKDVSVPASVTTYLKNHLGGRNTVVMLNI 339
           DI+LFVSRTVFNSD+RGVLGLVKVPC I QTA+D SVPASV TYLKNHLGG+NTV  LNI
Sbjct: 184 DITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGKNTVHWLNI 243

Query: 338 EGHFPHLRAPGLLAQELLRALS 273
           EGH PHL AP LLAQEL RALS
Sbjct: 244 EGHLPHLSAPTLLAQELRRALS 265


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