BLASTX nr result

ID: Cnidium21_contig00006854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006854
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu...   316   4e-84
ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor...   315   6e-84
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor...   315   6e-84
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor...   315   8e-84
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...   315   1e-83

>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 731

 Score =  316 bits (809), Expect = 4e-84
 Identities = 143/168 (85%), Positives = 160/168 (95%), Gaps = 1/168 (0%)
 Frame = -1

Query: 817  YHAYKQNSDDQSWCYENFVNHRALKSADNVRQQLARIMSRFNLRLCSTDFNSRDYYINIR 638
            YHAYKQN++D SWCYENF+NHRALK+ADNVRQQL RIM+RFNL+LCSTDFNSRDYY+NIR
Sbjct: 564  YHAYKQNNEDPSWCYENFINHRALKAADNVRQQLVRIMTRFNLKLCSTDFNSRDYYVNIR 623

Query: 637  KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPLNCLDHKPEWVIYNEYVLTSRNFIGTV 458
            KAML+GYFMQVAHLERTGHYLTVKDNQVVHLHP NCLDHKPEWVIY+EYVLTSRNFI TV
Sbjct: 624  KAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYSEYVLTSRNFIRTV 683

Query: 457  TDVRGEWLIDIAPHYYDLENFPQCEARRVLDKLYKKRARE-DDSKTKK 317
            TD+RGEWL+DIAPHYYDL+NFP CEA+RVL+KLYKKR RE ++SK +K
Sbjct: 684  TDIRGEWLVDIAPHYYDLDNFPNCEAKRVLEKLYKKREREKEESKNRK 731


>ref|XP_003554560.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Glycine max]
          Length = 713

 Score =  315 bits (808), Expect = 6e-84
 Identities = 142/162 (87%), Positives = 155/162 (95%)
 Frame = -1

Query: 817  YHAYKQNSDDQSWCYENFVNHRALKSADNVRQQLARIMSRFNLRLCSTDFNSRDYYINIR 638
            YHAYKQN++D SWCY+NFVNHRALKSADNVRQQL RIMSRFNL+LCSTDFNSRDYY+NIR
Sbjct: 546  YHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIR 605

Query: 637  KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPLNCLDHKPEWVIYNEYVLTSRNFIGTV 458
            KAML+GYFMQVAHLERTGHYLTVKDNQVVHLHP NCLDHKPEWVIYNEYVLTSRNFI TV
Sbjct: 606  KAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTV 665

Query: 457  TDVRGEWLIDIAPHYYDLENFPQCEARRVLDKLYKKRAREDD 332
            TD+RGEWL+DIAPHYYDL NFPQCEA+RVL++LYKKR +E +
Sbjct: 666  TDIRGEWLVDIAPHYYDLSNFPQCEAKRVLERLYKKREKEKE 707


>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 1 [Glycine max]
          Length = 721

 Score =  315 bits (808), Expect = 6e-84
 Identities = 142/162 (87%), Positives = 155/162 (95%)
 Frame = -1

Query: 817  YHAYKQNSDDQSWCYENFVNHRALKSADNVRQQLARIMSRFNLRLCSTDFNSRDYYINIR 638
            YHAYKQN++D SWCY+NFVNHRALKSADNVRQQL RIMSRFNL+LCSTDFNSRDYY+NIR
Sbjct: 554  YHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIR 613

Query: 637  KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPLNCLDHKPEWVIYNEYVLTSRNFIGTV 458
            KAML+GYFMQVAHLERTGHYLTVKDNQVVHLHP NCLDHKPEWVIYNEYVLTSRNFI TV
Sbjct: 614  KAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTV 673

Query: 457  TDVRGEWLIDIAPHYYDLENFPQCEARRVLDKLYKKRAREDD 332
            TD+RGEWL+DIAPHYYDL NFPQCEA+RVL++LYKKR +E +
Sbjct: 674  TDIRGEWLVDIAPHYYDLSNFPQCEAKRVLERLYKKREKEKE 715


>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 720

 Score =  315 bits (807), Expect = 8e-84
 Identities = 141/162 (87%), Positives = 155/162 (95%)
 Frame = -1

Query: 817  YHAYKQNSDDQSWCYENFVNHRALKSADNVRQQLARIMSRFNLRLCSTDFNSRDYYINIR 638
            YHAYKQN++D SWCY+NFVNHRALKSADNVRQQL RIMSRFNL+LCSTDFNSRDYY+NIR
Sbjct: 553  YHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIR 612

Query: 637  KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPLNCLDHKPEWVIYNEYVLTSRNFIGTV 458
            KAML+GYFMQVAHLERTGHYLTVKDNQVVHLHP NCLDHKPEWVIYNEYVLTSRNFI TV
Sbjct: 613  KAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTV 672

Query: 457  TDVRGEWLIDIAPHYYDLENFPQCEARRVLDKLYKKRAREDD 332
            TD+RGEWL+D+APHYYDL NFPQCEA+RVL++LYKKR +E +
Sbjct: 673  TDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREKEKE 714


>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 722

 Score =  315 bits (806), Expect = 1e-83
 Identities = 141/168 (83%), Positives = 161/168 (95%), Gaps = 1/168 (0%)
 Frame = -1

Query: 817  YHAYKQNSDDQSWCYENFVNHRALKSADNVRQQLARIMSRFNLRLCSTDFNSRDYYINIR 638
            YHAYKQN++D SWCY+NFVNHRALKSADNVRQQL RIM+RFNL+LCSTDFNSRDYY+NIR
Sbjct: 555  YHAYKQNNEDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIR 614

Query: 637  KAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPLNCLDHKPEWVIYNEYVLTSRNFIGTV 458
            KAML+GYFMQVAHLERTGHYLTVKDNQVVHLHP NCLDHKPEWVIYNEYVLTSRNFI TV
Sbjct: 615  KAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTV 674

Query: 457  TDVRGEWLIDIAPHYYDLENFPQCEARRVLDKLYKKRARE-DDSKTKK 317
            TD+RGEWL+D+APHYYDL NFPQCEA+RVL++LYKKR +E ++++++K
Sbjct: 675  TDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSRK 722


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