BLASTX nr result

ID: Cnidium21_contig00006845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006845
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308380.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis ...   163   1e-38
ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp....   163   1e-38
ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis tha...   163   1e-38
gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|221363...   163   1e-38

>ref|XP_002308380.1| predicted protein [Populus trichocarpa] gi|222854356|gb|EEE91903.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/98 (81%), Positives = 80/98 (81%)
 Frame = +1

Query: 1   TLNFLLWGSHSTGAXXXXXXXXXXXXXXXXSVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 180
           TLNFLLWGSHSTGA                SVPLTLVGGYFGAKAPHIEYPVRTNQIPRE
Sbjct: 256 TLNFLLWGSHSTGAIPFSLFVVLIFMWFCISVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 315

Query: 181 IPAQNYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 294
           IPAQ YPSWLLV GAGTLPFGTLFIELFFIMSSIWMGR
Sbjct: 316 IPAQKYPSWLLVFGAGTLPFGTLFIELFFIMSSIWMGR 353


>ref|NP_001190420.1| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|10176814|dbj|BAB10022.1| endosomal protein-like
           [Arabidopsis thaliana] gi|332006552|gb|AED93935.1|
           endomembrane family protein 70 [Arabidopsis thaliana]
          Length = 658

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/98 (80%), Positives = 81/98 (82%)
 Frame = +1

Query: 1   TLNFLLWGSHSTGAXXXXXXXXXXXXXXXXSVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 180
           TLNFLLWGSHSTGA                SVPLTL+GGYFGAKAPHIE+PVRTNQIPRE
Sbjct: 447 TLNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPRE 506

Query: 181 IPAQNYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 294
           IPAQ YPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR
Sbjct: 507 IPAQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 544


>ref|XP_002868407.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314243|gb|EFH44666.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 630

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/98 (80%), Positives = 81/98 (82%)
 Frame = +1

Query: 1   TLNFLLWGSHSTGAXXXXXXXXXXXXXXXXSVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 180
           TLNFLLWGSHSTGA                SVPLTL+GGYFGAKAPHIE+PVRTNQIPRE
Sbjct: 419 TLNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPRE 478

Query: 181 IPAQNYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 294
           IPAQ YPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR
Sbjct: 479 IPAQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 516


>ref|NP_198366.2| endomembrane family protein 70 [Arabidopsis thaliana]
           gi|332006551|gb|AED93934.1| endomembrane family protein
           70 [Arabidopsis thaliana]
          Length = 630

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/98 (80%), Positives = 81/98 (82%)
 Frame = +1

Query: 1   TLNFLLWGSHSTGAXXXXXXXXXXXXXXXXSVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 180
           TLNFLLWGSHSTGA                SVPLTL+GGYFGAKAPHIE+PVRTNQIPRE
Sbjct: 419 TLNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPRE 478

Query: 181 IPAQNYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 294
           IPAQ YPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR
Sbjct: 479 IPAQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 516


>gb|AAM20600.1| putative protein [Arabidopsis thaliana] gi|22136376|gb|AAM91266.1|
           putative protein [Arabidopsis thaliana]
          Length = 425

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/98 (80%), Positives = 81/98 (82%)
 Frame = +1

Query: 1   TLNFLLWGSHSTGAXXXXXXXXXXXXXXXXSVPLTLVGGYFGAKAPHIEYPVRTNQIPRE 180
           TLNFLLWGSHSTGA                SVPLTL+GGYFGAKAPHIE+PVRTNQIPRE
Sbjct: 214 TLNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLIGGYFGAKAPHIEFPVRTNQIPRE 273

Query: 181 IPAQNYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 294
           IPAQ YPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR
Sbjct: 274 IPAQKYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGR 311


Top