BLASTX nr result
ID: Cnidium21_contig00006821
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00006821
(985 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA32827.1| 98b [Daucus carota] 276 5e-72
ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [S... 204 1e-60
ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arab... 201 1e-60
ref|NP_001144208.1| hypothetical protein [Zea mays] gi|195638446... 202 4e-60
ref|NP_192846.1| HMG (high mobility group) box protein [Arabidop... 192 7e-58
>dbj|BAA32827.1| 98b [Daucus carota]
Length = 502
Score = 276 bits (706), Expect = 5e-72
Identities = 147/207 (71%), Positives = 151/207 (72%)
Frame = -3
Query: 797 RKEKDPLKPKHPVTTFFLFMNERRADLVAEKKNVLEVGKITGEEWKNMSEKEKAPYEEMA 618
+KEKDPLKPKHPV+ FFLFMNERRADLVAEKKNVLEVGKITGEEWKNM+EKEKAPYEEMA
Sbjct: 282 KKEKDPLKPKHPVSAFFLFMNERRADLVAEKKNVLEVGKITGEEWKNMTEKEKAPYEEMA 341
Query: 617 KKNKEQYLQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXXXXXXX 438
KKNK QYLQQM AMQ
Sbjct: 342 KKNKNQYLQQMEVYKKKKDEEAASLQKEEEELSKIQKQEAMQLLKKKEKTENLIKKTKEE 401
Query: 437 XXXXXKAEKKIVDPNKPKRPASSFFLFSKEARKTISEERPGINNSTLNALISVKWKEISQ 258
K EKKIVDPNKPKRPASSF LFSKEARKTISEERPGINNSTLNALISVKWKEIS
Sbjct: 402 RQKKQKGEKKIVDPNKPKRPASSFLLFSKEARKTISEERPGINNSTLNALISVKWKEISH 461
Query: 257 EEKQVWNEKAAGAMEAYKKEMEEYNKT 177
EEKQ+WNEKAAGAMEAYKKEMEEYNKT
Sbjct: 462 EEKQLWNEKAAGAMEAYKKEMEEYNKT 488
Score = 79.7 bits (195), Expect = 1e-12
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 3/68 (4%)
Frame = -2
Query: 939 SFLKIVGAEKRENEAMKLLEEEQKQKTTMELLEQYMQFKEETLDYFKQEGEGSTE---TK 769
++LKIVGAEKRENEAMKLLEEEQKQ+T MELLEQYMQFKEET + K++ + + K
Sbjct: 232 AYLKIVGAEKRENEAMKLLEEEQKQRTAMELLEQYMQFKEETENDKKKKTKKEKDPLKPK 291
Query: 768 APGDNFFL 745
P FFL
Sbjct: 292 HPVSAFFL 299
>ref|XP_002453635.1| hypothetical protein SORBIDRAFT_04g009610 [Sorghum bicolor]
gi|241933466|gb|EES06611.1| hypothetical protein
SORBIDRAFT_04g009610 [Sorghum bicolor]
Length = 488
Score = 204 bits (519), Expect(2) = 1e-60
Identities = 108/208 (51%), Positives = 134/208 (64%)
Frame = -3
Query: 803 SNRKEKDPLKPKHPVTTFFLFMNERRADLVAEKKNVLEVGKITGEEWKNMSEKEKAPYEE 624
+++K+KDP KPK P++ +F++ ERRA LVAEKKNV E+GKITGEEWKNM+E +KAPYE+
Sbjct: 278 NSKKDKDPSKPKQPMSAYFVYSQERRAALVAEKKNVPEIGKITGEEWKNMTEAQKAPYEK 337
Query: 623 MAKKNKEQYLQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXXXXX 444
+A+K KE+Y +QM A+Q
Sbjct: 338 VARKQKEEYQKQMEVYKQKKIEEAASLEKEEEEHKKIMKQEALQLLKKKEKADNIIKKTK 397
Query: 443 XXXXXXXKAEKKIVDPNKPKRPASSFFLFSKEARKTISEERPGINNSTLNALISVKWKEI 264
+++ DPN+PKRPASSF LFSKEARK + EERPGINNS+LNALISVKWKE+
Sbjct: 398 ENRQKK---KQENADPNRPKRPASSFLLFSKEARKQLLEERPGINNSSLNALISVKWKEL 454
Query: 263 SQEEKQVWNEKAAGAMEAYKKEMEEYNK 180
S EE+Q WN KAA AM AYKKEMEEY K
Sbjct: 455 SGEERQAWNAKAAPAMAAYKKEMEEYTK 482
Score = 56.6 bits (135), Expect(2) = 1e-60
Identities = 27/55 (49%), Positives = 42/55 (76%)
Frame = -2
Query: 951 EDLASFLKIVGAEKRENEAMKLLEEEQKQKTTMELLEQYMQFKEETLDYFKQEGE 787
++ ++L++VG EKRE EAMKLLEE+Q Q T ELL+QY++F++E ++EG+
Sbjct: 220 QEKEAYLQVVGQEKREAEAMKLLEEQQMQWTAKELLDQYLKFRQEA----EEEGD 270
>ref|XP_002874673.1| hypothetical protein ARALYDRAFT_489947 [Arabidopsis lyrata subsp.
lyrata] gi|297320510|gb|EFH50932.1| hypothetical protein
ARALYDRAFT_489947 [Arabidopsis lyrata subsp. lyrata]
Length = 448
Score = 201 bits (512), Expect(2) = 1e-60
Identities = 107/207 (51%), Positives = 133/207 (64%)
Frame = -3
Query: 797 RKEKDPLKPKHPVTTFFLFMNERRADLVAEKKNVLEVGKITGEEWKNMSEKEKAPYEEMA 618
+K KDPLKPKHP++ + ++ NERRA L E K+V+EV K+TGEEWKN+SE++KAPY++MA
Sbjct: 240 KKIKDPLKPKHPISAYLIYANERRAALKGENKSVIEVAKMTGEEWKNLSEEQKAPYDQMA 299
Query: 617 KKNKEQYLQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXXXXXXX 438
KK KE YLQ+M A+Q
Sbjct: 300 KKKKEIYLQEMEGYKITKEEETMSQKKEEEELMKLHKQEALQLLKKKEKTDNIIKKTKEM 359
Query: 437 XXXXXKAEKKIVDPNKPKRPASSFFLFSKEARKTISEERPGINNSTLNALISVKWKEISQ 258
K EK VDPNKPK+PASS+FLF KEARK++ EE PGINNST+ A IS+KWKE+ +
Sbjct: 360 TKNKKKNEK--VDPNKPKKPASSYFLFCKEARKSVLEEHPGINNSTVTAHISLKWKELGE 417
Query: 257 EEKQVWNEKAAGAMEAYKKEMEEYNKT 177
EEKQV+N KAA MEAYKKE+EEYNKT
Sbjct: 418 EEKQVYNGKAAELMEAYKKEVEEYNKT 444
Score = 58.9 bits (141), Expect(2) = 1e-60
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -2
Query: 948 DLASFLKIVGAEKRENEAMKLLEEEQKQKTTMELLEQYMQFKEE 817
D ++L+++ EKRE EAMKLL++EQKQKT MELL+QY+ F +E
Sbjct: 187 DKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHFVQE 230
>ref|NP_001144208.1| hypothetical protein [Zea mays] gi|195638446|gb|ACG38691.1|
hypothetical protein [Zea mays]
gi|413936487|gb|AFW71038.1| hypothetical protein
ZEAMMB73_874920 [Zea mays]
Length = 487
Score = 202 bits (515), Expect(2) = 4e-60
Identities = 110/218 (50%), Positives = 135/218 (61%)
Frame = -3
Query: 833 CSSRRKLWIISNRKEKDPLKPKHPVTTFFLFMNERRADLVAEKKNVLEVGKITGEEWKNM 654
C RK ++K+KDP KPK P++ +F++ ERRA LVAEKKNV E+GKITGEEWKNM
Sbjct: 270 CKKGRKK---KSKKDKDPSKPKQPMSAYFVYSQERRATLVAEKKNVPEIGKITGEEWKNM 326
Query: 653 SEKEKAPYEEMAKKNKEQYLQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXX 474
+E ++APYEE+A+K KE+Y +QM A+Q
Sbjct: 327 TEGQRAPYEEVARKQKEEYHKQMEVYKQKKAEEAASLEKEEQEHKKIMKHEALQLLKKKE 386
Query: 473 XXXXXXXXXXXXXXXXXKAEKKIVDPNKPKRPASSFFLFSKEARKTISEERPGINNSTLN 294
+++ DPN+PKRPASSF LFSKE RK + EERPGINNSTLN
Sbjct: 387 KADNIIKKTKEKRQKK---KQENADPNRPKRPASSFLLFSKEERKQLIEERPGINNSTLN 443
Query: 293 ALISVKWKEISQEEKQVWNEKAAGAMEAYKKEMEEYNK 180
ALI+VKWKE+S EE+Q WN KAA AM AYKKEMEEY K
Sbjct: 444 ALITVKWKELSGEERQAWNAKAAPAMAAYKKEMEEYTK 481
Score = 56.2 bits (134), Expect(2) = 4e-60
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = -2
Query: 951 EDLASFLKIVGAEKRENEAMKLLEEEQKQKTTMELLEQYMQFKEE 817
++ ++L++VG EKRE EAMKLLEE+Q Q T ELL+QY++F++E
Sbjct: 220 QEKEAYLQVVGQEKREAEAMKLLEEQQMQWTAKELLDQYLKFRQE 264
>ref|NP_192846.1| HMG (high mobility group) box protein [Arabidopsis thaliana]
gi|75266789|sp|Q9T012.1|HMG13_ARATH RecName: Full=High
mobility group B protein 13; AltName:
Full=Nucleosome/chromatin assembly factor group D 13
gi|4850287|emb|CAB43043.1| 98b like protein [Arabidopsis
thaliana] gi|7267807|emb|CAB81209.1| 98b like protein
[Arabidopsis thaliana] gi|22136604|gb|AAM91621.1|
putative 98b protein [Arabidopsis thaliana]
gi|332657570|gb|AEE82970.1| HMG (high mobility group)
box protein [Arabidopsis thaliana]
Length = 446
Score = 192 bits (488), Expect(2) = 7e-58
Identities = 102/207 (49%), Positives = 129/207 (62%)
Frame = -3
Query: 797 RKEKDPLKPKHPVTTFFLFMNERRADLVAEKKNVLEVGKITGEEWKNMSEKEKAPYEEMA 618
+K KDPLKPK P++ + ++ NERRA L E K+V+EV K+ GEEWKN+SE++KAPY++MA
Sbjct: 238 KKIKDPLKPKQPISAYLIYANERRAALKGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMA 297
Query: 617 KKNKEQYLQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMQXXXXXXXXXXXXXXXXXX 438
KKNKE YLQ+M A+Q
Sbjct: 298 KKNKEIYLQEMEGYKRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKET 357
Query: 437 XXXXXKAEKKIVDPNKPKRPASSFFLFSKEARKTISEERPGINNSTLNALISVKWKEISQ 258
K E VDPNKPK+P SS+FLF K+ARK++ EE PGINNST+ A IS+KW E+ +
Sbjct: 358 AKNKKKNEN--VDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGE 415
Query: 257 EEKQVWNEKAAGAMEAYKKEMEEYNKT 177
EEKQV+N KAA MEAYKKE+EEYNKT
Sbjct: 416 EEKQVYNSKAAELMEAYKKEVEEYNKT 442
Score = 58.9 bits (141), Expect(2) = 7e-58
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -2
Query: 948 DLASFLKIVGAEKRENEAMKLLEEEQKQKTTMELLEQYMQFKEE 817
D ++L+++ EKRE EAMKLL++EQKQKT MELL+QY+ F +E
Sbjct: 185 DKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHFVQE 228