BLASTX nr result

ID: Cnidium21_contig00006793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006793
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22695.3| unnamed protein product [Vitis vinifera]              150   5e-34
ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus ...   150   5e-34
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   149   1e-33
ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-29

>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  150 bits (379), Expect = 5e-34
 Identities = 90/205 (43%), Positives = 112/205 (54%), Gaps = 2/205 (0%)
 Frame = -2

Query: 978 EEEKLEPLRNMTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXESMDKRSVDDLLSFIN 799
           EEEKLEPLRN+TDDPRIRLLNRLYA                   E +D+RSVDDLLSFIN
Sbjct: 150 EEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREKLKNVEVEEERVDERSVDDLLSFIN 209

Query: 798 GGDGDSXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXSLKSECHHGDMQDVCSSS 619
           G DGDS                   +                 + + CH+ +  ++  S+
Sbjct: 210 GEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGDHKKELDGVHTSCHNAEADEMLVST 269

Query: 618 P--TSMLQNSSSATFLSNFXXXXXXXXXXXDPKLKEEIDREVEDFARRLNSGWSERMQEI 445
           P  TS LQ   ++TF               DP +KE++DREVEDFARRLNS W ERMQEI
Sbjct: 270 PSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKEQLDREVEDFARRLNSDWPERMQEI 329

Query: 444 LSLGQEKRPLPISIHGNSSVARNTA 370
           LSLGQ++R +PIS++GN S  R T+
Sbjct: 330 LSLGQQRRLVPISMNGNGSAHRYTS 354


>ref|XP_002513681.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547589|gb|EEF49084.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 378

 Score =  150 bits (379), Expect = 5e-34
 Identities = 88/200 (44%), Positives = 110/200 (55%)
 Frame = -2

Query: 978 EEEKLEPLRNMTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXESMDKRSVDDLLSFIN 799
           EEEKLEPLRN+TDDPRIRLLNRLYA                   E +D+RSVDDLLS+IN
Sbjct: 138 EEEKLEPLRNVTDDPRIRLLNRLYARKRKELKEREKMKNVEVEEERVDERSVDDLLSYIN 197

Query: 798 GGDGDSXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXSLKSECHHGDMQDVCSSS 619
           G DGD                    +                S  S CH G+++D+ +S 
Sbjct: 198 GADGDPKGGRTSKNKKKNRRRKDQSKESSSNNLNENHNKKTNSCPSACHSGEVRDMVASP 257

Query: 618 PTSMLQNSSSATFLSNFXXXXXXXXXXXDPKLKEEIDREVEDFARRLNSGWSERMQEILS 439
             +  Q S +A+                DP +KEE+DREVEDFARRLNS W ERMQEILS
Sbjct: 258 SKTSRQESGAASLSPKLEFDDADIDDDLDPAMKEELDREVEDFARRLNSDWPERMQEILS 317

Query: 438 LGQEKRPLPISIHGNSSVAR 379
           LGQE+R +P+S++GN S++R
Sbjct: 318 LGQERRLVPLSMNGNGSLSR 337


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score =  149 bits (375), Expect = 1e-33
 Identities = 89/202 (44%), Positives = 110/202 (54%), Gaps = 2/202 (0%)
 Frame = -2

Query: 978 EEEKLEPLRNMTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXESMDKRSVDDLLSFIN 799
           EEEKLEPLRN+TDDPRIRLLNRLYA                   E +D+RSVDDLLSFIN
Sbjct: 150 EEEKLEPLRNITDDPRIRLLNRLYARKRKELKEREKLKNVEVEEERVDERSVDDLLSFIN 209

Query: 798 GGDGDSXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXSLKSECHHGDMQDVCSSS 619
           G DGDS                   +                 + + CH+ +  ++  S+
Sbjct: 210 GEDGDSKGVRASKNKKKNRRRKDQMKDSSSNNVNGDHKKELDGVHTSCHNAEADEMLVST 269

Query: 618 P--TSMLQNSSSATFLSNFXXXXXXXXXXXDPKLKEEIDREVEDFARRLNSGWSERMQEI 445
           P  TS LQ   ++TF               DP +KE++DREVEDFARRLNS W ERMQEI
Sbjct: 270 PSKTSKLQELPASTFSPKLEFDDGDIDDELDPAMKEQLDREVEDFARRLNSDWPERMQEI 329

Query: 444 LSLGQEKRPLPISIHGNSSVAR 379
           LSLGQ++R +PIS++GN S  R
Sbjct: 330 LSLGQQRRLVPISMNGNGSAHR 351


>ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|222858884|gb|EEE96431.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  141 bits (356), Expect = 2e-31
 Identities = 88/202 (43%), Positives = 107/202 (52%), Gaps = 2/202 (0%)
 Frame = -2

Query: 978 EEEKLEPLRNMTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXESMDKRSVDDLLSFIN 799
           EEEKLEPL N+TDDPRIRLLNRLYA                   E  D RSV+DLLSFIN
Sbjct: 150 EEEKLEPLGNITDDPRIRLLNRLYARKRRELREREKLKNVDVEDERSDNRSVEDLLSFIN 209

Query: 798 GGDGDSXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXSLKSECHHGDMQDVCSSS 619
           G DGDS                   +                +L S   + ++ D+ ++S
Sbjct: 210 GEDGDSKGGRNSKNKKKNRRRKEQAKDSSSNNPNENQKKESDTLPSVSLNDEVNDILAAS 269

Query: 618 P--TSMLQNSSSATFLSNFXXXXXXXXXXXDPKLKEEIDREVEDFARRLNSGWSERMQEI 445
           P  TS  Q  S+ TF               DP +KEE+DREVEDFARRLNS W ERMQEI
Sbjct: 270 PSKTSNFQGCSAVTFSPKLDFDDADIDDDLDPAMKEELDREVEDFARRLNSDWPERMQEI 329

Query: 444 LSLGQEKRPLPISIHGNSSVAR 379
           LSL Q+KRP+P+S++GN +  R
Sbjct: 330 LSLDQKKRPVPLSMNGNGTSRR 351


>ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|222844316|gb|EEE81863.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  134 bits (337), Expect = 3e-29
 Identities = 88/201 (43%), Positives = 103/201 (51%), Gaps = 1/201 (0%)
 Frame = -2

Query: 978 EEEKLEPLRNMTDDPRIRLLNRLYAXXXXXXXXXXXXXXXXXXXESMDKRSVDDLLSFIN 799
           EEEKLEPL+N TDDPRIRLLNRLYA                   E +D RSVDDLLSFIN
Sbjct: 151 EEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKEREKLKNVEAEEEHVDDRSVDDLLSFIN 210

Query: 798 GGDGDSXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXSLKSECHHGDMQDVCSSS 619
           GGDGDS                   +                    E H  D  ++ SS 
Sbjct: 211 GGDGDSKGMKTSKNRKKQQKRKDRQKCAP-----------------EMHKKDDHELQSSL 253

Query: 618 PTSM-LQNSSSATFLSNFXXXXXXXXXXXDPKLKEEIDREVEDFARRLNSGWSERMQEIL 442
              + LQ+++   F               DP LKEEIDREVEDFAR LNS W ERMQE+L
Sbjct: 254 REKLNLQDAADVIFSPTVEFEDVDIDGEIDPALKEEIDREVEDFARILNSDWPERMQELL 313

Query: 441 SLGQEKRPLPISIHGNSSVAR 379
           SLGQE+RP  +SI+GN ++ R
Sbjct: 314 SLGQERRPAQLSINGNGNLKR 334


Top