BLASTX nr result

ID: Cnidium21_contig00006705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006705
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis ...   166   2e-39
gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabido...   165   4e-39
ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabi...   165   4e-39
emb|CBI33027.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
           gi|297338777|gb|EFH69194.1| ubiquitin-specific protease
           15 [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/141 (58%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8   NSVTEHSCPDTKRNGQFADESKIGRLRDDNPEQGRNGNSS-MGLRKIIGLMRSPKFDRAV 184
           N   E SC +T + GQ A  SK  R +D    +  NG SS MG+ K++GL  S K D   
Sbjct: 357 NKSGEQSCTETSKKGQVAAVSKTVRSKDTGIAEESNGTSSTMGIMKMMGLRNSTKHD--- 413

Query: 185 TTNDKQKKLKMLFPYDEFVKFFHCDFFNLSPRGFINCGNSCYANAVLQCLTFTKPLTIFL 364
              D+ K LKMLFPY+EF+KFF C+ F+LSPRG +NCGNSCYANAVLQ LT TKPL  +L
Sbjct: 414 ---DRHKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYL 470

Query: 365 LRRSHSRYCRAKDWCLMCELE 427
           LRRSHSR C  KDWCLMCELE
Sbjct: 471 LRRSHSRSCSGKDWCLMCELE 491


>gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabidopsis thaliana]
          Length = 924

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/141 (58%), Positives = 98/141 (69%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8   NSVTEHSCPDTKRNGQFADESKIGRLRDDNPEQGRNG-NSSMGLRKIIGLMRSPKFDRAV 184
           N   E SC +T + GQ A  SK  R +D    +  NG +S+MG+ K++GL  S K D   
Sbjct: 353 NKSGEQSCTETSKKGQVAAVSKTVRSKDTGISEESNGVSSTMGIMKMMGLRNSTKHD--- 409

Query: 185 TTNDKQKKLKMLFPYDEFVKFFHCDFFNLSPRGFINCGNSCYANAVLQCLTFTKPLTIFL 364
              D+ K LKMLFPY+EF+KFF C+ F+LSPRG +NCGNSCYANAVLQ LT TKPL  +L
Sbjct: 410 ---DRYKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYL 466

Query: 365 LRRSHSRYCRAKDWCLMCELE 427
           LRRSHSR C  KDWCLMCELE
Sbjct: 467 LRRSHSRSCSGKDWCLMCELE 487


>ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
           gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
           Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
           Full=Ubiquitin thioesterase 15; AltName:
           Full=Ubiquitin-specific-processing protease 15
           gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal
           hydrolase 15 [Arabidopsis thaliana]
          Length = 924

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/141 (58%), Positives = 98/141 (69%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8   NSVTEHSCPDTKRNGQFADESKIGRLRDDNPEQGRNG-NSSMGLRKIIGLMRSPKFDRAV 184
           N   E SC +T + GQ A  SK  R +D    +  NG +S+MG+ K++GL  S K D   
Sbjct: 353 NKSGEQSCTETSKKGQVAAVSKTVRSKDTGISEESNGISSTMGIMKMMGLRNSTKHD--- 409

Query: 185 TTNDKQKKLKMLFPYDEFVKFFHCDFFNLSPRGFINCGNSCYANAVLQCLTFTKPLTIFL 364
              D+ K LKMLFPY+EF+KFF C+ F+LSPRG +NCGNSCYANAVLQ LT TKPL  +L
Sbjct: 410 ---DRYKNLKMLFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYL 466

Query: 365 LRRSHSRYCRAKDWCLMCELE 427
           LRRSHSR C  KDWCLMCELE
Sbjct: 467 LRRSHSRSCSGKDWCLMCELE 487


>emb|CBI33027.3| unnamed protein product [Vitis vinifera]
          Length = 894

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/141 (55%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
 Frame = +2

Query: 20  EHSCPDTKRNGQFADESKIGRLRDDNP--EQGRNGNSSMGLRKIIGL---MRSPKFDRAV 184
           E +C + +R GQ A+ +   R+ D  P    G N  +SMG  K++GL   ++ PK D + 
Sbjct: 320 EETCSEIERKGQTAEAT---RMSDSTPILAPGNNEVTSMGFMKMMGLRKPLKPPKQDASE 376

Query: 185 TTNDKQKKLKMLFPYDEFVKFFHCDFFNLSPRGFINCGNSCYANAVLQCLTFTKPLTIFL 364
            ++D  KK+KMLFPY+EFV+FF C+ FN+SPRG +NCGNSCYANAVLQCLT TKPL I+L
Sbjct: 377 ESSDIHKKIKMLFPYEEFVRFFQCEVFNISPRGLLNCGNSCYANAVLQCLTCTKPLIIYL 436

Query: 365 LRRSHSRYCRAKDWCLMCELE 427
           L+RSHSR C   +WCLMCELE
Sbjct: 437 LQRSHSRTCCVTNWCLMCELE 457


>ref|XP_002317364.1| predicted protein [Populus trichocarpa] gi|222860429|gb|EEE97976.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/128 (58%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
 Frame = +2

Query: 50  GQFADESKIGRLRDDNPEQGRNGNSSMGLRKIIGLMRSPKFDRAVTT--NDKQKKLKMLF 223
           GQ  D+SK+ R+R+ NP  G NG +S+G+ K++ L +S K      T  N   KKL+MLF
Sbjct: 303 GQLTDDSKVARMRNANPAAGTNGVTSIGIMKMMDLRKSSKLATQDITEVNATHKKLRMLF 362

Query: 224 PYDEFVKFFHCDFFNLSPRGFINCGNSCYANAVLQCLTFTKPLTIFLLRRSHSRYCRAKD 403
           PY+EFV  F+C+  +L+PRG +NCGNSCYANAVLQCLT TKPL +FLL RSHSR C   D
Sbjct: 363 PYEEFVNIFNCEVIDLTPRGLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRACCEID 422

Query: 404 WCLMCELE 427
           WCLMCELE
Sbjct: 423 WCLMCELE 430


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