BLASTX nr result

ID: Cnidium21_contig00006702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006702
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vi...   379   e-103
ref|XP_002299066.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101
ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Gl...   372   e-100
ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Gl...   369   e-100
ref|XP_003532195.1| PREDICTED: RNA-binding protein pno1-like [Gl...   369   e-100

>ref|XP_002272565.1| PREDICTED: RNA-binding protein pno1-like [Vitis vinifera]
           gi|225455824|ref|XP_002272932.1| PREDICTED: RNA-binding
           protein pno1-like [Vitis vinifera]
          Length = 224

 Score =  379 bits (973), Expect = e-103
 Identities = 193/224 (86%), Positives = 207/224 (92%), Gaps = 2/224 (0%)
 Frame = +1

Query: 70  MESDKGTTSMEIEKVQSGANRVS--FASKPNFEPLKAHEISDGQVQFRKVSVPSHRYTPL 243
           M+S++  TSME+E V S  N  S  F SKP FEPLKAHE+S+G+VQFRKVSVP HRYTPL
Sbjct: 1   MQSNEPATSMEVENVLSEPNPTSGTFPSKPKFEPLKAHEMSEGRVQFRKVSVPPHRYTPL 60

Query: 244 KKAWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKSADFVHAFMLGFDVID 423
           KKAWMEIYTP+YEQMKIDIRMNLK RKVELKTR+DTPDISNLQK  DFVHAFMLGF V+D
Sbjct: 61  KKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCTDFVHAFMLGFGVVD 120

Query: 424 AVALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTK 603
           A+ALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIEN+T+TRIVIADTK
Sbjct: 121 AIALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATRTRIVIADTK 180

Query: 604 IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTSRLAERF 735
           IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVT+RLAERF
Sbjct: 181 IHILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 224


>ref|XP_002299066.1| predicted protein [Populus trichocarpa] gi|222846324|gb|EEE83871.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  372 bits (955), Expect = e-101
 Identities = 189/223 (84%), Positives = 203/223 (91%), Gaps = 1/223 (0%)
 Frame = +1

Query: 70  MESDKGTTSMEIEKV-QSGANRVSFASKPNFEPLKAHEISDGQVQFRKVSVPSHRYTPLK 246
           M+S K    ME+E   +   +  +  +KP FEPLKAHE+SDG+VQFRKVSVPSHRY+PLK
Sbjct: 1   MQSSKAPAPMEVEIAPREQKSEGTLPAKPKFEPLKAHEMSDGRVQFRKVSVPSHRYSPLK 60

Query: 247 KAWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKSADFVHAFMLGFDVIDA 426
           KAWMEIYTPVYEQMKIDIRMNLK RKVELKTRSDTPD+SNLQK ADFVHAFMLGFDVIDA
Sbjct: 61  KAWMEIYTPVYEQMKIDIRMNLKARKVELKTRSDTPDVSNLQKCADFVHAFMLGFDVIDA 120

Query: 427 VALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKI 606
           +ALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIEN+TKTRIVIADTKI
Sbjct: 121 IALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENATKTRIVIADTKI 180

Query: 607 HILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTSRLAERF 735
           HILGSF NIK+ARDSLCSLILGSPAGKVYSKLR VT+RLAERF
Sbjct: 181 HILGSFQNIKVARDSLCSLILGSPAGKVYSKLRQVTARLAERF 223


>ref|XP_003551375.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  372 bits (954), Expect = e-100
 Identities = 187/222 (84%), Positives = 205/222 (92%)
 Frame = +1

Query: 70  MESDKGTTSMEIEKVQSGANRVSFASKPNFEPLKAHEISDGQVQFRKVSVPSHRYTPLKK 249
           MES++  +SME+E V S A  +    KP FEPLK HE+SDGQVQFRKV+VP HRYTPLKK
Sbjct: 1   MESNQAASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 250 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKSADFVHAFMLGFDVIDAV 429
           AWM+IYTP+YEQMKID+RMNLK R+VELKTR DTPDISNLQK ADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 430 ALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIH 609
           ALLRLDELY+ESFEIKDVKTLRG+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIH
Sbjct: 119 ALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIH 178

Query: 610 ILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTSRLAERF 735
           ILGSF+NIKIARDSLCSLILGSPAGKVYSKLRAVT+RLAERF
Sbjct: 179 ILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


>ref|XP_003551374.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  369 bits (948), Expect = e-100
 Identities = 186/222 (83%), Positives = 205/222 (92%)
 Frame = +1

Query: 70  MESDKGTTSMEIEKVQSGANRVSFASKPNFEPLKAHEISDGQVQFRKVSVPSHRYTPLKK 249
           MES++  +SME+E V S A  +    KP FEPLK HE+SDGQVQFRKV+VP HRYTPLKK
Sbjct: 1   MESNQEASSMEVETVPSEAKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 250 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKSADFVHAFMLGFDVIDAV 429
           AWM+IY+P+YEQMKID+RMNLK R+VELKTR DTPDISNLQK ADFVHAFMLGFDVIDA+
Sbjct: 59  AWMDIYSPIYEQMKIDVRMNLKARRVELKTRPDTPDISNLQKCADFVHAFMLGFDVIDAI 118

Query: 430 ALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIH 609
           ALLRLDELY+ESFEIKDVKTLRG+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIH
Sbjct: 119 ALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIH 178

Query: 610 ILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTSRLAERF 735
           ILGSF+NIKIARDSLCSLILGSPAGKVYSKLRAVT+RLAERF
Sbjct: 179 ILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


>ref|XP_003532195.1| PREDICTED: RNA-binding protein pno1-like [Glycine max]
          Length = 220

 Score =  369 bits (948), Expect = e-100
 Identities = 184/222 (82%), Positives = 204/222 (91%)
 Frame = +1

Query: 70  MESDKGTTSMEIEKVQSGANRVSFASKPNFEPLKAHEISDGQVQFRKVSVPSHRYTPLKK 249
           MES++  +SM+++ V S    +    KP FEPLK HE+SDGQVQFRKV+VP HRYTPLKK
Sbjct: 1   MESNQAASSMDVDTVPSEVKLLP--PKPKFEPLKPHEMSDGQVQFRKVNVPPHRYTPLKK 58

Query: 250 AWMEIYTPVYEQMKIDIRMNLKGRKVELKTRSDTPDISNLQKSADFVHAFMLGFDVIDAV 429
           AWM+IYTP+YEQMKID+RMNLKGR++ELKTR DTPDISNLQK ADF HAFMLGFDVIDA+
Sbjct: 59  AWMDIYTPIYEQMKIDVRMNLKGRRIELKTRPDTPDISNLQKCADFAHAFMLGFDVIDAI 118

Query: 430 ALLRLDELYVESFEIKDVKTLRGEHLSRAIGRLSGKGGKTKFAIENSTKTRIVIADTKIH 609
           ALLRLDELY+ESFEIKDVKTLRG+HLSRAIGRLSGKGGKTKFAIEN++KTRIVIADTKIH
Sbjct: 119 ALLRLDELYIESFEIKDVKTLRGDHLSRAIGRLSGKGGKTKFAIENASKTRIVIADTKIH 178

Query: 610 ILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTSRLAERF 735
           ILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVT+RLAERF
Sbjct: 179 ILGSFSNIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF 220


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