BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006694
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002889463.1| photosystem II family protein [Arabidopsis l...   166   1e-39
ref|NP_563687.1| photosystem II Psb27 protein [Arabidopsis thali...   166   2e-39
ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, put...   166   2e-39
ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g036...   166   2e-39

>ref|XP_002302130.1| predicted protein [Populus trichocarpa] gi|222843856|gb|EEE81403.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/100 (79%), Positives = 93/100 (93%)
 Frame = -1

Query: 418 VKDAGEVISKIRNTISKDRNDPDVADAVAQLRETSNSWVAKYRKEKALLGRSSFRDIYSA 239
           VKD  +VI+K+R T++ D+NDP+VADAVA LRETSNSWVAKYR+EKALLGR+SFRD+YSA
Sbjct: 77  VKDTEDVINKVRTTVNMDKNDPNVADAVANLRETSNSWVAKYRREKALLGRASFRDMYSA 136

Query: 238 LNAVSGHYISFGPTAPIPAKRRVRILEEMETAEKALQRGR 119
           LNAV+GHY+SFGPTAPIP+KRR RILEEM+TAEKAL RGR
Sbjct: 137 LNAVTGHYVSFGPTAPIPSKRRARILEEMDTAEKALSRGR 176


>ref|XP_002889463.1| photosystem II family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335305|gb|EFH65722.1| photosystem II family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 174

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/100 (80%), Positives = 91/100 (91%)
 Frame = -1

Query: 418 VKDAGEVISKIRNTISKDRNDPDVADAVAQLRETSNSWVAKYRKEKALLGRSSFRDIYSA 239
           +KD   VISK+R+T+S  + DP+VADAVA+LRE SNSWVAKYRKEKALLG++SFRDIYSA
Sbjct: 75  IKDTSAVISKVRSTLSMQKTDPNVADAVAELREASNSWVAKYRKEKALLGKASFRDIYSA 134

Query: 238 LNAVSGHYISFGPTAPIPAKRRVRILEEMETAEKALQRGR 119
           LNAVSGHY+SFGPTAPIPAKR+ RILEEMETAEKAL RGR
Sbjct: 135 LNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKALSRGR 174


>ref|NP_563687.1| photosystem II Psb27 protein [Arabidopsis thaliana]
           gi|75180295|sp|Q9LR64.1|Y1360_ARATH RecName:
           Full=Thylakoid lumenal protein At1g03610, chloroplastic;
           Flags: Precursor gi|9280647|gb|AAF86516.1|AC002560_9
           F21B7.21 [Arabidopsis thaliana]
           gi|13899089|gb|AAK48966.1|AF370539_1 Unknown protein
           [Arabidopsis thaliana] gi|14994277|gb|AAK73273.1|
           Unknown protein [Arabidopsis thaliana]
           gi|21386971|gb|AAM47889.1| unknown protein [Arabidopsis
           thaliana] gi|21536786|gb|AAM61118.1| unknown
           [Arabidopsis thaliana] gi|332189467|gb|AEE27588.1|
           photosystem II Psb27 protein [Arabidopsis thaliana]
          Length = 174

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/100 (80%), Positives = 91/100 (91%)
 Frame = -1

Query: 418 VKDAGEVISKIRNTISKDRNDPDVADAVAQLRETSNSWVAKYRKEKALLGRSSFRDIYSA 239
           +KD   VISK+R+T+S  + DP+VADAVA+LRE SNSWVAKYRKEKALLG++SFRDIYSA
Sbjct: 75  IKDTSAVISKVRSTLSMQKTDPNVADAVAELREASNSWVAKYRKEKALLGKASFRDIYSA 134

Query: 238 LNAVSGHYISFGPTAPIPAKRRVRILEEMETAEKALQRGR 119
           LNAVSGHY+SFGPTAPIPAKR+ RILEEMETAEKAL RGR
Sbjct: 135 LNAVSGHYVSFGPTAPIPAKRKARILEEMETAEKALTRGR 174


>ref|XP_002512708.1| Photosystem II 11 kDa protein precursor, putative [Ricinus
           communis] gi|223548669|gb|EEF50160.1| Photosystem II 11
           kDa protein precursor, putative [Ricinus communis]
          Length = 173

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/100 (81%), Positives = 93/100 (93%)
 Frame = -1

Query: 418 VKDAGEVISKIRNTISKDRNDPDVADAVAQLRETSNSWVAKYRKEKALLGRSSFRDIYSA 239
           VK+ GEVI KIR+TI+ ++NDP+VA AVA+LRETSNSWVAKYR+EK LLGR+SFRDIYSA
Sbjct: 74  VKETGEVIDKIRSTINMEKNDPNVATAVAELRETSNSWVAKYRREKTLLGRTSFRDIYSA 133

Query: 238 LNAVSGHYISFGPTAPIPAKRRVRILEEMETAEKALQRGR 119
           LNAVSGHYISFGPTAPIPAKR+ RILEEM++AEKAL RGR
Sbjct: 134 LNAVSGHYISFGPTAPIPAKRKARILEEMDSAEKALLRGR 173


>ref|XP_003543345.1| PREDICTED: thylakoid lumenal protein At1g03610, chloroplastic-like
           [Glycine max]
          Length = 169

 Score =  166 bits (419), Expect = 2e-39
 Identities = 82/100 (82%), Positives = 92/100 (92%)
 Frame = -1

Query: 418 VKDAGEVISKIRNTISKDRNDPDVADAVAQLRETSNSWVAKYRKEKALLGRSSFRDIYSA 239
           VK+  EVI+K+R TI  D+NDP+VA AVA+LRETSNSWVAKYR+EKALLGR+SFRDIYSA
Sbjct: 70  VKETEEVINKVRTTIVMDKNDPNVATAVAELRETSNSWVAKYRREKALLGRASFRDIYSA 129

Query: 238 LNAVSGHYISFGPTAPIPAKRRVRILEEMETAEKALQRGR 119
           LNAVSGHYISFGPTAPIPAKRR RILEE++TAEKAL RGR
Sbjct: 130 LNAVSGHYISFGPTAPIPAKRRARILEEVDTAEKALLRGR 169