BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006690
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   593   e-167
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ...   551   e-154
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an...   533   e-149
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin...   521   e-145
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an...   518   e-145

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  593 bits (1530), Expect = e-167
 Identities = 291/372 (78%), Positives = 328/372 (88%), Gaps = 2/372 (0%)
 Frame = +2

Query: 113  MEKVSVWDLPDVPEGHLPSHIQLQRTRVHCNPDAPIYTENVQYSGAYSSFGVDNSLQLEQ 292
            M +    D+PDVP+G LP HI+LQRTRV CN DAP +TENVQYSGAYSS GVDNSL+++Q
Sbjct: 1    MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60

Query: 293  FRKNFRVEVIRLDKEDMEFDMIGVDPSLANAFRRILIAEIPTMAIEKVLIANNTSVVQDE 472
            F  NFRVEVIRL ++DMEFDMIG+DPS+ANAFRRILIAE+PTMAIEKVLIANNTS+VQDE
Sbjct: 61   FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120

Query: 473  VLSHRLGLIPINADPRLFDYKSENDDPKENNTIVFKLHVRCERGSQRITVKSDELKWLPN 652
            VL+HRLGLIPINADPRLFD  SEND P E NTIVF LHVRCERG  R+TVKS+ELKWLP+
Sbjct: 121  VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH 180

Query: 653  GSEFPL--ETSAAKSTSKPKTYTSFHTSQETLHDFSKKPIAPCHPDIILSKLGPGQEIEL 826
            GSEFPL  E + + STSKPKTYTSF  SQ++L +FS K I P HPDII++KLGPGQEIEL
Sbjct: 181  GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL 240

Query: 827  EAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDERAEKLVKTCPVNVFDIEDVGKD 1006
            EAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQE+EDE+AE+LVK CPVNVFDIED+ K 
Sbjct: 241  EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKG 300

Query: 1007 KKRAIVARPRGCTLCRECIREDEFKQDVALRRVKDHFIFTIESTGALPPEVLFTEAVKIL 1186
            KK+A VARPR CTLCRECIR D++ + VA+RRVK+HFIFTIESTGALPPEVLF EAVK+L
Sbjct: 301  KKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVL 360

Query: 1187 EDKCERVIAELS 1222
            EDKCERVI ELS
Sbjct: 361  EDKCERVITELS 372


>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
            communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
            polymerase I/III subunits, putative [Ricinus communis]
          Length = 374

 Score =  551 bits (1421), Expect = e-154
 Identities = 273/377 (72%), Positives = 313/377 (83%)
 Frame = +2

Query: 92   KKHTHTHMEKVSVWDLPDVPEGHLPSHIQLQRTRVHCNPDAPIYTENVQYSGAYSSFGVD 271
            K+      +K S+WDLPDVP G LP H+QLQRTRV C  DAPI+T+N+ YSGAY+S GVD
Sbjct: 4    KQENKEKNKKFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVD 63

Query: 272  NSLQLEQFRKNFRVEVIRLDKEDMEFDMIGVDPSLANAFRRILIAEIPTMAIEKVLIANN 451
            NSLQL+ FR NF+VEVI+L K+DMEFDMIG+D ++ANAFRRILI+E+PTMAIEKVLIANN
Sbjct: 64   NSLQLDCFRDNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANN 123

Query: 452  TSVVQDEVLSHRLGLIPINADPRLFDYKSENDDPKENNTIVFKLHVRCERGSQRITVKSD 631
            TS++QDEVL+HRLGLIPINADPRLF+Y S ND P E NTIVFKLH  C+RG  R TV S+
Sbjct: 124  TSLIQDEVLAHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSE 183

Query: 632  ELKWLPNGSEFPLETSAAKSTSKPKTYTSFHTSQETLHDFSKKPIAPCHPDIILSKLGPG 811
            ELKWLP GS+   E+   K+ SKP TYTSF   Q    DF  KP++P    II++KLGPG
Sbjct: 184  ELKWLPGGSQLLKESE--KADSKPSTYTSFTDKQ----DFIPKPVSPSEDKIIVAKLGPG 237

Query: 812  QEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDERAEKLVKTCPVNVFDIE 991
            QEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++EDE AE+L K CPVNVFDIE
Sbjct: 238  QEIELEAHAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIE 297

Query: 992  DVGKDKKRAIVARPRGCTLCRECIREDEFKQDVALRRVKDHFIFTIESTGALPPEVLFTE 1171
            D+G  KKRA VARPR CTLCRECIR  E+ + V+LRRVKDHFIFTIESTGALPPEVLFTE
Sbjct: 298  DIGNGKKRATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTE 357

Query: 1172 AVKILEDKCERVIAELS 1222
            AVK+LEDKCERVI ELS
Sbjct: 358  AVKVLEDKCERVITELS 374


>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Cucumis sativus] gi|449522768|ref|XP_004168398.1|
            PREDICTED: DNA-directed RNA polymerases I and III subunit
            RPAC1-like [Cucumis sativus]
          Length = 391

 Score =  533 bits (1373), Expect = e-149
 Identities = 266/366 (72%), Positives = 307/366 (83%), Gaps = 1/366 (0%)
 Frame = +2

Query: 128  VWDLPDVPEGHLPSHIQLQRTRVHCNPDAPIYTENVQYSGAYSSFGVDNSLQLEQFRKNF 307
            + +LPDVP   LP H++LQRTRV C  DAPI+T+ +QYSGA++S G DNSL+L+ FR NF
Sbjct: 29   IMNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNF 87

Query: 308  RVEVIRLDKEDMEFDMIGVDPSLANAFRRILIAEIPTMAIEKVLIANNTSVVQDEVLSHR 487
            ++EVI L ++D+EFDMIG+DP+LANAFRRILI+E+PTMAIEKVL ANNTS+VQDEVL+HR
Sbjct: 88   KIEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHR 147

Query: 488  LGLIPINADPRLFDYKSENDDPKENNTIVFKLHVRCERGSQRITVKSDELKWLPNGSEFP 667
            LGL+PI  DPRLF Y S+ D P ENNTIVF+LH  CERG  R+TV S  L WLPNGSEFP
Sbjct: 148  LGLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFP 206

Query: 668  LETSAAKSTSKPKTYTSFHTSQETL-HDFSKKPIAPCHPDIILSKLGPGQEIELEAHAVK 844
            L +  + S SKPKTYTSF  SQ TL  +FS  PI P   DIIL++LGPGQEIELEAHAVK
Sbjct: 207  LVSDKSVSNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAVK 266

Query: 845  GIGKTHAKWSPVATAWYRMLPEVVLLQEVEDERAEKLVKTCPVNVFDIEDVGKDKKRAIV 1024
            G+GKTHAKWSPVATAWYRMLPEVVL++E+EDE AE+L K CPVNVFDIED+   KKRA V
Sbjct: 267  GMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRATV 325

Query: 1025 ARPRGCTLCRECIREDEFKQDVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCER 1204
            ARPR CTLCRECIR D +++ VALRRVKDHFIF IESTGALPPEVLFTEAVKILEDKCER
Sbjct: 326  ARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCER 385

Query: 1205 VIAELS 1222
            +IAELS
Sbjct: 386  LIAELS 391


>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
            gi|255637183|gb|ACU18922.1| unknown [Glycine max]
          Length = 388

 Score =  521 bits (1341), Expect = e-145
 Identities = 265/367 (72%), Positives = 305/367 (83%), Gaps = 2/367 (0%)
 Frame = +2

Query: 128  VWDLPDVPEGHLPSHIQLQRTRVHCNPDAPIYTENVQYSGAYSSFGVDNSLQLEQFRKNF 307
            +  L +VP   LP H++L +TRV CN DAP++T+ VQYSGAY+  GVDNS++L+ F +NF
Sbjct: 23   ILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILGVDNSVRLDSFCENF 81

Query: 308  RVEVIRLDKEDMEFDMIGVDPSLANAFRRILIAEIPTMAIEKVLIANNTSVVQDEVLSHR 487
            +VEV RL   D+EFDMIG+DP++ANAFRRILIAE+PTMAIE+V IANNTSVVQDEVLSHR
Sbjct: 82   KVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHR 141

Query: 488  LGLIPINADPRLFDY-KSENDDPKENNTIVFKLHVRCERGSQRITVKSDELKWLPNGSEF 664
            LGLIPI ADPRLF+Y ++  DD  E NTIVFKLHVRC+ G  RITVKSD+LKWLPNGSE 
Sbjct: 142  LGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSEL 201

Query: 665  PLETSAAKSTSKPKTYTSFHTSQETLHDFSKKPIAPCHPDIILSKLGPGQEIELEAHAVK 844
            P E     + SKPKT+TSF  SQ++L +FS   I   + DIIL+KLGPGQEIELEAHAVK
Sbjct: 202  PCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVK 261

Query: 845  GIGKTHAKWSPVATAWYRMLPEVVLLQEVEDERAEKLVKTCPVNVFDIEDVGKDKKRAIV 1024
            GIGKTHAKWSPVATAWYRMLPEVVLL+ VEDE AE+L   CPVNVFDIED+GK K+RA V
Sbjct: 262  GIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVNVFDIEDIGKGKRRAKV 321

Query: 1025 ARPRGCTLCRECIR-EDEFKQDVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCE 1201
            ARPR CTLCRECIR   E++  V+LRRVK+HFIFTIESTGALPPEVLFTEAVKILEDKCE
Sbjct: 322  ARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 381

Query: 1202 RVIAELS 1222
            RVI ELS
Sbjct: 382  RVITELS 388


>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
            [Glycine max]
          Length = 393

 Score =  518 bits (1335), Expect = e-145
 Identities = 263/367 (71%), Positives = 304/367 (82%), Gaps = 2/367 (0%)
 Frame = +2

Query: 128  VWDLPDVPEGHLPSHIQLQRTRVHCNPDAPIYTENVQYSGAYSSFGVDNSLQLEQFRKNF 307
            +  L +VP   LP H++L +TRV CN DAP++T+ VQYSGAY+  GVDNS++L+ F +NF
Sbjct: 28   ILSLDNVPS-KLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMGVDNSVRLDSFCENF 86

Query: 308  RVEVIRLDKEDMEFDMIGVDPSLANAFRRILIAEIPTMAIEKVLIANNTSVVQDEVLSHR 487
            +VEV RL   D+EFDMIG+DP++ANAFRRILIAE+PTMAIE+V IANNTSVVQDEVLSHR
Sbjct: 87   KVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIANNTSVVQDEVLSHR 146

Query: 488  LGLIPINADPRLFDY-KSENDDPKENNTIVFKLHVRCERGSQRITVKSDELKWLPNGSEF 664
            LGLIPI ADPRLF+Y ++  DD  E NTIVFKLHVRC+ G  RITVKSD+LKWLPNGSE 
Sbjct: 147  LGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITVKSDKLKWLPNGSEL 206

Query: 665  PLETSAAKSTSKPKTYTSFHTSQETLHDFSKKPIAPCHPDIILSKLGPGQEIELEAHAVK 844
            P E     + SKPKT+TSF  SQ++L +FS   I   + DIIL+KLGPGQEIELEAHAVK
Sbjct: 207  PCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILAKLGPGQEIELEAHAVK 266

Query: 845  GIGKTHAKWSPVATAWYRMLPEVVLLQEVEDERAEKLVKTCPVNVFDIEDVGKDKKRAIV 1024
            G GKTHAKWSPVAT WYRMLPEVVLL++VEDE AE+L   CPVNVFDIED+GK K+RA V
Sbjct: 267  GTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVNVFDIEDIGKGKRRAKV 326

Query: 1025 ARPRGCTLCRECIR-EDEFKQDVALRRVKDHFIFTIESTGALPPEVLFTEAVKILEDKCE 1201
            ARPR CTLCRECIR   E++  V+LRRVK+HFIFTIESTGALPPEVLFTEAVKILEDKCE
Sbjct: 327  ARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 386

Query: 1202 RVIAELS 1222
            RVI ELS
Sbjct: 387  RVITELS 393