BLASTX nr result

ID: Cnidium21_contig00006687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006687
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]               59   4e-07
sp|Q6L400.1|R1B16_SOLDE RecName: Full=Putative late blight resis...    56   4e-06
sp|Q6L3X3.1|R1B8_SOLDE RecName: Full=Putative late blight resist...    55   7e-06

>dbj|BAD15107.1| hypothetical protein [Nicotiana tabacum]
          Length = 364

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 10/125 (8%)
 Frame = +1

Query: 184 PESISGLRQLQTLIMSSRT-DMVVPKTVWKMINLKHLCIKSGVNL---VNFSNDEEPSLL 351
           P+ I  L  +QTLI++++   + +   +W M  L+HL   S   L   V   + + P + 
Sbjct: 142 PKHIGELWNIQTLIINTQQRSLDIQANIWNMARLRHLHTNSSAKLPLPVTPRSSKVPLVN 201

Query: 352 ENMLTVSLVSPSRPCQDILARTPNLQKLGLCGPLTTKSGDLKCPDLSLLM------HLET 513
           +++ T+S ++P    +++ ARTPNL+KLG+ G +      L  P+ SLL       +LE 
Sbjct: 202 QSLQTLSTIAPESCTEEVFARTPNLKKLGIRGKIAV----LLEPNKSLLKNVKKLEYLEN 257

Query: 514 LKLLN 528
           LKL+N
Sbjct: 258 LKLIN 262


>sp|Q6L400.1|R1B16_SOLDE RecName: Full=Putative late blight resistance protein homolog R1B-16
            gi|47825001|gb|AAT38773.1| Putative late blight
            resistance protein, identical [Solanum demissum]
          Length = 1284

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 46/138 (33%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
 Frame = +1

Query: 163  RFWSGSPPESISGLRQLQTLIMS--SRTDMVVPKTVWKMINLKHLCIKSGVNLVNFSNDE 336
            R    S P SIS L  L+TLI+   SR  +++P TVW M+ L+HL      ++ NF  + 
Sbjct: 972  RIEQNSIPSSISNLWNLETLILKHVSRCTVLLPSTVWDMVKLRHL------HIPNFRPEN 1025

Query: 337  EPSLLEN--------MLTVSLVSPSRPCQDILARTPNLQKLGL---CGPLTTKSGDLKCP 483
            E +LLEN         L+    S     + +L +TPNL+KL     C     +   L  P
Sbjct: 1026 EEALLENSAKLYDLETLSTPYFSRVEDAELMLRKTPNLRKLVCEVECLEYPPQYHVLNFP 1085

Query: 484  DLSLLMHLETLKLLNTIP 537
                ++ L   K  NTIP
Sbjct: 1086 IRLEILKLYRSKAFNTIP 1103


>sp|Q6L3X3.1|R1B8_SOLDE RecName: Full=Putative late blight resistance protein homolog R1B-8
            gi|47825030|gb|AAT38800.1| Putative late blight
            resistance protein, identical [Solanum demissum]
          Length = 1202

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 13/130 (10%)
 Frame = +1

Query: 178  SPPESISGLRQLQTLIMSSRTD-----MVVPKTVWKMINLKHLCIKSGVNLVNFSNDEEP 342
            S P SIS L  L+TLI+ SR+      +++P TVW M+ L+HL      ++  FS ++E 
Sbjct: 900  SIPSSISNLWNLETLILKSRSASKHNRVLLPSTVWDMVKLRHL------HIPYFSTEDEE 953

Query: 343  SLLEN--------MLTVSLVSPSRPCQDILARTPNLQKLGLCGPLTTKSGDLKCPDLSLL 498
            +LLEN         L+    S     + +L RTPNL+KL +C     +S   +   L+  
Sbjct: 954  ALLENSAKLYDLETLSSPYFSRVEDAELMLRRTPNLRKL-ICEVQCLESPH-QYHVLNFP 1011

Query: 499  MHLETLKLLN 528
            + LE LKL N
Sbjct: 1012 IRLEILKLYN 1021


Top