BLASTX nr result

ID: Cnidium21_contig00006666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006666
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-l...   665   0.0  
emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]   659   0.0  
ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-l...   658   0.0  
ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|2...   653   0.0  
gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indi...   650   0.0  

>ref|XP_002266000.2| PREDICTED: T-complex protein 1 subunit eta-like [Vitis vinifera]
            gi|296088202|emb|CBI35717.3| unnamed protein product
            [Vitis vinifera]
          Length = 562

 Score =  665 bits (1716), Expect = 0.0
 Identities = 344/392 (87%), Positives = 356/392 (90%)
 Frame = +1

Query: 70   MSTMMQPQIILLKEGTDTSQGKAQLVSNINAVMGVADLVRTTLGPRGMDKLIHDDKGNTT 249
            M+ M+QPQIILLKEGTDTSQGKAQLVSNI+A   VAD+VRTTLGPRGMDKLIHDDKGNTT
Sbjct: 1    MAAMLQPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTT 60

Query: 250  ISNDGATIMKLLDIVHPAAKILVDVAKSQDSEVGDXXXXXXXXXXEFLKEAKPFIEDGVH 429
            ISNDGATIMKLLDIVHPAAKILVD+AKSQDSEVGD          EFLKEAKPFIEDGVH
Sbjct: 61   ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 120

Query: 430  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKRSLLAKCAATTLSSKLIGGEKEFFAS 609
            PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEK+SLLAKCAATTLSSKLIGGEKEFFAS
Sbjct: 121  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFAS 180

Query: 610  MVVDSVLAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXX 789
            MVVDSV+AIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF     
Sbjct: 181  MVVDSVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240

Query: 790  XXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD 969
                           AEIRLSDPLQYQSIVDAEWNIIYDKLDKCV+SGAKIVLSRLAIGD
Sbjct: 241  LLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSRLAIGD 300

Query: 970  LGTQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEIFEEKQVGNER 1149
            L TQYFADRDIFCAGRV EEDLQRVAAATGGTVQT+VNN+IDEVLGSCE+FEE+QVGNER
Sbjct: 301  LATQYFADRDIFCAGRVTEEDLQRVAAATGGTVQTTVNNIIDEVLGSCELFEERQVGNER 360

Query: 1150 FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 1245
            FNIFSGCPSGQTATIVLRGGADQFIEEAERSL
Sbjct: 361  FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 392


>emb|CAN70107.1| hypothetical protein VITISV_002043 [Vitis vinifera]
          Length = 567

 Score =  659 bits (1700), Expect = 0.0
 Identities = 344/397 (86%), Positives = 356/397 (89%), Gaps = 5/397 (1%)
 Frame = +1

Query: 70   MSTMMQPQIILLKEGTDTSQGKAQLVSNINAVMGVADLVRTTLGPRGMDKLIHDDKGNTT 249
            M+ M+QPQIILLKEGTDTSQGKAQLVSNI+A   VAD+VRTTLGPRGMDKLIHDDKGNTT
Sbjct: 1    MAAMLQPQIILLKEGTDTSQGKAQLVSNISACTVVADVVRTTLGPRGMDKLIHDDKGNTT 60

Query: 250  ISNDGATIMKLLDIVHPAAKILVDVAKSQDSEVGDXXXXXXXXXXEFLKEAKPFIEDGVH 429
            ISNDGATIMKLLDIVHPAAKILVD+AKSQDSEVGD          EFLKEAKPFIEDGVH
Sbjct: 61   ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFIEDGVH 120

Query: 430  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKRSLLAKCAATTLSSKLIGGEKEFFAS 609
            PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEK+SLLAKCAATTLSSKLIGGEKEFFAS
Sbjct: 121  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFAS 180

Query: 610  MVVDSVLAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXX 789
            MVVDSV+AIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF     
Sbjct: 181  MVVDSVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKI 240

Query: 790  XXXXXXXXXXXXXXXAEIR-----LSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSR 954
                           AEIR     LSDPLQYQSIVDAEWNIIYDKLDKCV+SGAKIVLSR
Sbjct: 241  LLLNIELELKSEKENAEIRQDYFGLSDPLQYQSIVDAEWNIIYDKLDKCVQSGAKIVLSR 300

Query: 955  LAIGDLGTQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEIFEEKQ 1134
            LAIGDL TQYFADRDIFCAGRV EEDLQRVAAATGGTVQT+VNN+IDEVLGSCE+FEE+Q
Sbjct: 301  LAIGDLATQYFADRDIFCAGRVTEEDLQRVAAATGGTVQTTVNNIIDEVLGSCELFEERQ 360

Query: 1135 VGNERFNIFSGCPSGQTATIVLRGGADQFIEEAERSL 1245
            VGNERFNIFSGCPSGQTATIVLRGGADQFIEEAERSL
Sbjct: 361  VGNERFNIFSGCPSGQTATIVLRGGADQFIEEAERSL 397


>ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-like [Cucumis sativus]
            gi|449493528|ref|XP_004159333.1| PREDICTED: T-complex
            protein 1 subunit eta-like [Cucumis sativus]
          Length = 562

 Score =  658 bits (1698), Expect = 0.0
 Identities = 337/392 (85%), Positives = 355/392 (90%)
 Frame = +1

Query: 70   MSTMMQPQIILLKEGTDTSQGKAQLVSNINAVMGVADLVRTTLGPRGMDKLIHDDKGNTT 249
            M+ M+QPQIILLKEGTDTSQGKAQLVSNINA   VAD+VRTTLGPRGMDKLIHDDKGN T
Sbjct: 1    MAAMLQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVT 60

Query: 250  ISNDGATIMKLLDIVHPAAKILVDVAKSQDSEVGDXXXXXXXXXXEFLKEAKPFIEDGVH 429
            ISNDGATIMKLLDIVHPAAKILVD+AKSQDSEVGD          EFLKEAKPFIEDGVH
Sbjct: 61   ISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVH 120

Query: 430  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKRSLLAKCAATTLSSKLIGGEKEFFAS 609
             QNLIRSYRTASYLAIEK+KELA+SIEGKSLEEK+SLLAKCAATTLSSKLIGGEK+FFAS
Sbjct: 121  SQNLIRSYRTASYLAIEKVKELAISIEGKSLEEKKSLLAKCAATTLSSKLIGGEKDFFAS 180

Query: 610  MVVDSVLAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXX 789
            MVVDSV+AIGN+DRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF     
Sbjct: 181  MVVDSVIAIGNEDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFSNPKI 240

Query: 790  XXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD 969
                           AEIRLSDP QYQSIVDAEWNIIY+KLDKCV+SGAK+VLSRLAIGD
Sbjct: 241  LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYEKLDKCVESGAKVVLSRLAIGD 300

Query: 970  LGTQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEIFEEKQVGNER 1149
            LGTQYFADRDIFCAGRVAEEDLQRVAAATGGT+QTSVNNVIDEVLG+CE+FEEKQVGNER
Sbjct: 301  LGTQYFADRDIFCAGRVAEEDLQRVAAATGGTIQTSVNNVIDEVLGTCEVFEEKQVGNER 360

Query: 1150 FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 1245
            +NIFSGCPSG+TATIVLRGGADQFIEEAERSL
Sbjct: 361  YNIFSGCPSGRTATIVLRGGADQFIEEAERSL 392


>ref|XP_002328218.1| predicted protein [Populus trichocarpa] gi|222837733|gb|EEE76098.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  653 bits (1684), Expect = 0.0
 Identities = 334/392 (85%), Positives = 353/392 (90%)
 Frame = +1

Query: 70   MSTMMQPQIILLKEGTDTSQGKAQLVSNINAVMGVADLVRTTLGPRGMDKLIHDDKGNTT 249
            M+ MMQPQIILLKEGTDTSQGKAQLVSNINA   VAD+VRTTLGPRGMDKLIHDDKGN T
Sbjct: 1    MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVT 60

Query: 250  ISNDGATIMKLLDIVHPAAKILVDVAKSQDSEVGDXXXXXXXXXXEFLKEAKPFIEDGVH 429
            ISNDGATIMKLLDI+HPA+KILVD+AKSQDSEVGD          EFLKEAKPF+E+GVH
Sbjct: 61   ISNDGATIMKLLDIIHPASKILVDIAKSQDSEVGDGTTTVVLLAGEFLKEAKPFVEEGVH 120

Query: 430  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKRSLLAKCAATTLSSKLIGGEKEFFAS 609
            PQNLIRSYRTA  LAIEK+KELAVSIEGKSLEEK+SLLAKCAATTLSSKLIGGEKEFFAS
Sbjct: 121  PQNLIRSYRTACNLAIEKVKELAVSIEGKSLEEKKSLLAKCAATTLSSKLIGGEKEFFAS 180

Query: 610  MVVDSVLAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXX 789
            MVVD+V+AIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF     
Sbjct: 181  MVVDAVIAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFVNPKM 240

Query: 790  XXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD 969
                           AEIRLSDP QYQSIVDAEWNIIYDKLDKCV+SGAK+VLSRLAIGD
Sbjct: 241  LLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGD 300

Query: 970  LGTQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEIFEEKQVGNER 1149
            L TQYFADRDIFCAGRV+EEDLQRV+AATGGTVQT+VNN+IDEVLG+CEIFEEKQVGNER
Sbjct: 301  LATQYFADRDIFCAGRVSEEDLQRVSAATGGTVQTTVNNIIDEVLGTCEIFEEKQVGNER 360

Query: 1150 FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 1245
            FNIFSGCPSG+TATIVLRGGADQFIEEAERSL
Sbjct: 361  FNIFSGCPSGRTATIVLRGGADQFIEEAERSL 392


>gb|EEC81211.1| hypothetical protein OsI_24243 [Oryza sativa Indica Group]
          Length = 556

 Score =  650 bits (1677), Expect = 0.0
 Identities = 333/392 (84%), Positives = 351/392 (89%)
 Frame = +1

Query: 70   MSTMMQPQIILLKEGTDTSQGKAQLVSNINAVMGVADLVRTTLGPRGMDKLIHDDKGNTT 249
            M++MMQPQIILLKEGTDTSQG+AQ+VSNINA   VAD VRTTLGPRGMDKLIHDDKG TT
Sbjct: 1    MASMMQPQIILLKEGTDTSQGRAQVVSNINACTAVADTVRTTLGPRGMDKLIHDDKGGTT 60

Query: 250  ISNDGATIMKLLDIVHPAAKILVDVAKSQDSEVGDXXXXXXXXXXEFLKEAKPFIEDGVH 429
            ISNDGATIM+LLDI+HPAAKILVD+AKSQDSEVGD          EFLKEAKP+IEDGVH
Sbjct: 61   ISNDGATIMRLLDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVH 120

Query: 430  PQNLIRSYRTASYLAIEKIKELAVSIEGKSLEEKRSLLAKCAATTLSSKLIGGEKEFFAS 609
            P +LIRSYRTA +LAIEK+K+LA SIEGKSLEEK+ LLAKCAATTLSSKLIGGEKEFFAS
Sbjct: 121  PHSLIRSYRTAGHLAIEKVKDLATSIEGKSLEEKKELLAKCAATTLSSKLIGGEKEFFAS 180

Query: 610  MVVDSVLAIGNDDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFXXXXX 789
            MVVD+VLAI NDDRLN++GIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF     
Sbjct: 181  MVVDAVLAISNDDRLNLLGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLSPKI 240

Query: 790  XXXXXXXXXXXXXXXAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD 969
                           AEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD
Sbjct: 241  LLLNIELELKSEKENAEIRLSDPLQYQSIVDAEWNIIYDKLDKCVKSGAKIVLSRLAIGD 300

Query: 970  LGTQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEIFEEKQVGNER 1149
            L TQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCE+FEE+QVGNER
Sbjct: 301  LATQYFADRDIFCAGRVAEEDLQRVAAATGGTVQTSVNNVIDEVLGSCEVFEERQVGNER 360

Query: 1150 FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 1245
            FNIFSGCPSGQTATIVLRGGADQFIEEAERSL
Sbjct: 361  FNIFSGCPSGQTATIVLRGGADQFIEEAERSL 392


Top