BLASTX nr result

ID: Cnidium21_contig00006664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006664
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34472.3| unnamed protein product [Vitis vinifera]              196   3e-48
gb|ABK92491.1| unknown [Populus trichocarpa]                          196   4e-48
ref|XP_002302624.1| predicted protein [Populus trichocarpa] gi|2...   196   6e-48
ref|XP_002320857.1| predicted protein [Populus trichocarpa] gi|1...   194   1e-47
gb|AAF97339.1|AC023628_20 Unknown protein [Arabidopsis thaliana]      193   3e-47

>emb|CBI34472.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score =  196 bits (499), Expect = 3e-48
 Identities = 100/121 (82%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   PFVSRCIVLGDLMIGSVREVNVKSGLPATRSTERLELLDDTERILGVAIVGGDHRLKNYS 182
           PFVSRCIV GDL IGSVREVNVKSGLPAT STERLELLDD E I G+ IVGGDHRLKNYS
Sbjct: 57  PFVSRCIVQGDLEIGSVREVNVKSGLPATTSTERLELLDDEEHIFGMRIVGGDHRLKNYS 116

Query: 183 SVITVHP---DGRAGTQVIESFLVDVPDGNTKDETCIFVEALINCNLKSLAQVSERMAMQ 353
           S++TVHP   DGR GT VIESF+VDVPDGNTKDETC FVEALI CNLKSLA VSER+A+Q
Sbjct: 117 SIVTVHPEIIDGRPGTLVIESFVVDVPDGNTKDETCYFVEALIKCNLKSLADVSERLAIQ 176

Query: 354 D 356
           D
Sbjct: 177 D 177


>gb|ABK92491.1| unknown [Populus trichocarpa]
          Length = 186

 Score =  196 bits (498), Expect = 4e-48
 Identities = 100/121 (82%), Positives = 107/121 (88%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   PFVSRCIVLGDLMIGSVREVNVKSGLPATRSTERLELLDDTERILGVAIVGGDHRLKNYS 182
           PFVSRC++ G+L IGSVREVNVKSGLPAT STERLELLDD E ILGV IVGGDHRLKNYS
Sbjct: 58  PFVSRCVMNGELGIGSVREVNVKSGLPATTSTERLELLDDEEHILGVQIVGGDHRLKNYS 117

Query: 183 SVITVHP---DGRAGTQVIESFLVDVPDGNTKDETCIFVEALINCNLKSLAQVSERMAMQ 353
           S++TVHP   DGR GT VIESF+VDVPDGNTKDETC FVEALI CNLKSLA VSERMA+Q
Sbjct: 118 SIMTVHPEFIDGRPGTLVIESFIVDVPDGNTKDETCYFVEALIRCNLKSLADVSERMAVQ 177

Query: 354 D 356
           D
Sbjct: 178 D 178


>ref|XP_002302624.1| predicted protein [Populus trichocarpa] gi|222844350|gb|EEE81897.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score =  196 bits (497), Expect = 6e-48
 Identities = 99/124 (79%), Positives = 109/124 (87%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFVSRCIVLGDLMIGSVREVNVKSGLPATRSTERLELLDDTERILGVAIVGGDHRLKNYS 182
           PFVSRC++ G+L IGSVREVNVKSGLPAT STERLELLDD E ILGV IVGGDHRLKNYS
Sbjct: 58  PFVSRCVMNGELGIGSVREVNVKSGLPATTSTERLELLDDEEHILGVKIVGGDHRLKNYS 117

Query: 183 SVITVHP---DGRAGTQVIESFLVDVPDGNTKDETCIFVEALINCNLKSLAQVSERMAMQ 353
           S++TVHP   DGR GT VIESF+VDVPDGNTKDETC FV+ALI CNLKSLA VSERMA+Q
Sbjct: 118 SIMTVHPEIIDGRPGTLVIESFIVDVPDGNTKDETCYFVKALIRCNLKSLADVSERMAVQ 177

Query: 354 DFLQ 365
           D ++
Sbjct: 178 DLVE 181


>ref|XP_002320857.1| predicted protein [Populus trichocarpa] gi|118489403|gb|ABK96505.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222861630|gb|EEE99172.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  194 bits (494), Expect = 1e-47
 Identities = 99/121 (81%), Positives = 107/121 (88%), Gaps = 3/121 (2%)
 Frame = +3

Query: 3   PFVSRCIVLGDLMIGSVREVNVKSGLPATRSTERLELLDDTERILGVAIVGGDHRLKNYS 182
           PFVSRC++ G+L IGSVREVNVKSGLPAT STERLELLDD E ILGV IVGGDHRLKNYS
Sbjct: 58  PFVSRCVMNGELGIGSVREVNVKSGLPATTSTERLELLDDEEHILGVQIVGGDHRLKNYS 117

Query: 183 SVITVHP---DGRAGTQVIESFLVDVPDGNTKDETCIFVEALINCNLKSLAQVSERMAMQ 353
           S++TVHP   DGR GT VIESF+VDVPDGNTKDETC FV+ALI CNLKSLA VSERMA+Q
Sbjct: 118 SIMTVHPEFIDGRPGTLVIESFIVDVPDGNTKDETCYFVKALIRCNLKSLADVSERMAVQ 177

Query: 354 D 356
           D
Sbjct: 178 D 178


>gb|AAF97339.1|AC023628_20 Unknown protein [Arabidopsis thaliana]
          Length = 186

 Score =  193 bits (491), Expect = 3e-47
 Identities = 97/124 (78%), Positives = 106/124 (85%), Gaps = 3/124 (2%)
 Frame = +3

Query: 3   PFVSRCIVLGDLMIGSVREVNVKSGLPATRSTERLELLDDTERILGVAIVGGDHRLKNYS 182
           PFVSRC V+GD  IGS+REVNVKSGLPAT STERLELLDD E ILG+ I+GGDHRLKNYS
Sbjct: 63  PFVSRCTVIGDPEIGSLREVNVKSGLPATTSTERLELLDDEEHILGIKIIGGDHRLKNYS 122

Query: 183 SVITVHP---DGRAGTQVIESFLVDVPDGNTKDETCIFVEALINCNLKSLAQVSERMAMQ 353
           S++TVHP   +GRAGT VIESF+VDVP GNTKDETC FVEALI CNLKSLA VSER+A Q
Sbjct: 123 SILTVHPEIIEGRAGTMVIESFVVDVPQGNTKDETCYFVEALIRCNLKSLADVSERLASQ 182

Query: 354 DFLQ 365
           D  Q
Sbjct: 183 DITQ 186


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