BLASTX nr result

ID: Cnidium21_contig00006625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006625
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275216.1| PREDICTED: translocon-associated protein sub...   259   7e-67
ref|XP_003537760.1| PREDICTED: translocon-associated protein sub...   255   1e-65
ref|XP_002529245.1| translocon-associated protein, alpha subunit...   254   2e-65
ref|NP_001239981.1| uncharacterized protein LOC100820543 precurs...   254   3e-65
ref|NP_001058585.1| Os06g0715500 [Oryza sativa Japonica Group] g...   253   5e-65

>ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
           vinifera] gi|147821778|emb|CAN77171.1| hypothetical
           protein VITISV_029842 [Vitis vinifera]
           gi|297744658|emb|CBI37920.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  259 bits (662), Expect = 7e-67
 Identities = 128/178 (71%), Positives = 148/178 (83%)
 Frame = -2

Query: 986 PKNPSKSVVAGEATDLLIGLQYEGESNLKVIAVHASVHLPYDHNMLVQNLTTQAFNNASV 807
           PKN ++ V AGE  +LL+G++ +GES+L VIAV ASVHLP++H +LVQNL+TQ FNNASV
Sbjct: 67  PKNSARLVTAGEEAELLVGMKNDGESSLNVIAVKASVHLPFNHQLLVQNLSTQGFNNASV 126

Query: 806 APSAQATFPYTFAVSKFLQSGTFDLVGIIVYEIDQTAYQSTFYNGTIEVAEAGGPLSVES 627
             SAQATFPY FAVSK+LQ GTFDLVG IVYEIDQ  YQS FYNGTIEV EAGG +S+ES
Sbjct: 127 PASAQATFPYIFAVSKYLQPGTFDLVGTIVYEIDQHPYQSVFYNGTIEVVEAGGFVSIES 186

Query: 626 VFLFSLGVALLVLFGLWVRTQISQFSKKTKRTQKVEVGTATTDASMDEWLEGTAYTQS 453
           VFL  LG+ALLV FG+W+R QI   SKKTKR  KVEVGT TTDAS+DEWL+GTAYTQS
Sbjct: 187 VFLVFLGIALLVFFGVWIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWLQGTAYTQS 244


>ref|XP_003537760.1| PREDICTED: translocon-associated protein subunit alpha-like
           [Glycine max]
          Length = 258

 Score =  255 bits (652), Expect = 1e-65
 Identities = 125/178 (70%), Positives = 147/178 (82%)
 Frame = -2

Query: 986 PKNPSKSVVAGEATDLLIGLQYEGESNLKVIAVHASVHLPYDHNMLVQNLTTQAFNNASV 807
           PKN ++ + AGE T+LL+G++ +G+S+L VIA+ ASVHLP+DH MLVQNLT Q FNN SV
Sbjct: 72  PKNSARLITAGEETELLVGVKNDGDSSLNVIAIKASVHLPFDHRMLVQNLTAQGFNNGSV 131

Query: 806 APSAQATFPYTFAVSKFLQSGTFDLVGIIVYEIDQTAYQSTFYNGTIEVAEAGGPLSVES 627
             SAQATFPY FAVSKFLQ+GTFDLVG I+YEID+  YQSTF+NGT+EV E+G  LS+ES
Sbjct: 132 PASAQATFPYLFAVSKFLQAGTFDLVGTIIYEIDEHPYQSTFFNGTVEVVESGAFLSMES 191

Query: 626 VFLFSLGVALLVLFGLWVRTQISQFSKKTKRTQKVEVGTATTDASMDEWLEGTAYTQS 453
           VFL +LGVALLVL GLW+  QI   SKKTKR  KVEVGT TTDAS DEWL+GTAYTQS
Sbjct: 192 VFLVTLGVALLVLLGLWIHGQIQYLSKKTKRAPKVEVGTKTTDASTDEWLQGTAYTQS 249


>ref|XP_002529245.1| translocon-associated protein, alpha subunit, putative [Ricinus
           communis] gi|223531281|gb|EEF33123.1|
           translocon-associated protein, alpha subunit, putative
           [Ricinus communis]
          Length = 260

 Score =  254 bits (650), Expect = 2e-65
 Identities = 124/178 (69%), Positives = 148/178 (83%)
 Frame = -2

Query: 986 PKNPSKSVVAGEATDLLIGLQYEGESNLKVIAVHASVHLPYDHNMLVQNLTTQAFNNASV 807
           PKN ++ V AGE T++L+G++ +G+S++ VIAV ASVHLP+DH +LVQNLT QAFNNA+V
Sbjct: 74  PKNSARVVPAGEETEVLVGVKNDGDSSINVIAVKASVHLPFDHRLLVQNLTAQAFNNATV 133

Query: 806 APSAQATFPYTFAVSKFLQSGTFDLVGIIVYEIDQTAYQSTFYNGTIEVAEAGGPLSVES 627
             SAQATFPY FAVSK+LQ G+FDLVG I+YEIDQ  YQSTFYNGTIEV E+GG LS+ES
Sbjct: 134 PASAQATFPYIFAVSKYLQPGSFDLVGTIIYEIDQHPYQSTFYNGTIEVVESGGFLSIES 193

Query: 626 VFLFSLGVALLVLFGLWVRTQISQFSKKTKRTQKVEVGTATTDASMDEWLEGTAYTQS 453
           VFL +LG+ALLVL GLW+  QI   SKKTKR  KVEVGT T D S+DEWL+GTAYTQS
Sbjct: 194 VFLVTLGIALLVLLGLWIHGQIQNLSKKTKRAPKVEVGTGTRDVSLDEWLQGTAYTQS 251


>ref|NP_001239981.1| uncharacterized protein LOC100820543 precursor [Glycine max]
           gi|255634887|gb|ACU17802.1| unknown [Glycine max]
          Length = 258

 Score =  254 bits (648), Expect = 3e-65
 Identities = 124/178 (69%), Positives = 147/178 (82%)
 Frame = -2

Query: 986 PKNPSKSVVAGEATDLLIGLQYEGESNLKVIAVHASVHLPYDHNMLVQNLTTQAFNNASV 807
           PKN ++ + AGE ++LL+G++ +G+S+L VIA+ ASVHLP+DH MLVQNLT Q FNN SV
Sbjct: 72  PKNSARLITAGEESELLVGVKNDGDSSLNVIAIKASVHLPFDHRMLVQNLTAQGFNNGSV 131

Query: 806 APSAQATFPYTFAVSKFLQSGTFDLVGIIVYEIDQTAYQSTFYNGTIEVAEAGGPLSVES 627
             SAQATFPY FAVSKFLQSGTFDLVG I+YEID+  +QSTF+NGT+EV E+G  LS+ES
Sbjct: 132 PASAQATFPYLFAVSKFLQSGTFDLVGTIIYEIDEHPFQSTFFNGTVEVVESGAFLSMES 191

Query: 626 VFLFSLGVALLVLFGLWVRTQISQFSKKTKRTQKVEVGTATTDASMDEWLEGTAYTQS 453
           VFL +LGVALLVL GLW+  QI   SKKTKR  KVEVGT TTDAS DEWL+GTAYTQS
Sbjct: 192 VFLVTLGVALLVLLGLWIHGQIQHLSKKTKRAPKVEVGTRTTDASTDEWLQGTAYTQS 249


>ref|NP_001058585.1| Os06g0715500 [Oryza sativa Japonica Group]
           gi|53791783|dbj|BAD53577.1| putative SSR alpha subunit
           [Oryza sativa Japonica Group]
           gi|113596625|dbj|BAF20499.1| Os06g0715500 [Oryza sativa
           Japonica Group] gi|125598503|gb|EAZ38283.1| hypothetical
           protein OsJ_22661 [Oryza sativa Japonica Group]
           gi|215704734|dbj|BAG94762.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765401|dbj|BAG87098.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765644|dbj|BAG87341.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 257

 Score =  253 bits (646), Expect = 5e-65
 Identities = 125/179 (69%), Positives = 143/179 (79%)
 Frame = -2

Query: 986 PKNPSKSVVAGEATDLLIGLQYEGESNLKVIAVHASVHLPYDHNMLVQNLTTQAFNNASV 807
           PKN  K V+AGE T+LL+GLQ EGES L V+A+H+++HLP+DH M  QNLT Q F NASV
Sbjct: 73  PKNAGKIVLAGEETELLVGLQNEGESTLNVVAIHSTLHLPFDHKMYGQNLTVQNFFNASV 132

Query: 806 APSAQATFPYTFAVSKFLQSGTFDLVGIIVYEIDQTAYQSTFYNGTIEVAEAGGPLSVES 627
             S QATFPYTFAVSKFLQ G +DLVG IVYEIDQ  YQ+ FYNGT+EV EAGG LSVES
Sbjct: 133 PVSVQATFPYTFAVSKFLQPGAYDLVGYIVYEIDQNPYQNVFYNGTVEVVEAGGLLSVES 192

Query: 626 VFLFSLGVALLVLFGLWVRTQISQFSKKTKRTQKVEVGTATTDASMDEWLEGTAYTQSS 450
           VFL +LGVALL LFGLW   Q+ Q SKKTK+  KVE+GT TTDA+MDEWLEGTA+ Q S
Sbjct: 193 VFLITLGVALLGLFGLWAYGQVQQLSKKTKKAPKVELGTGTTDANMDEWLEGTAFAQGS 251


Top