BLASTX nr result

ID: Cnidium21_contig00006617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006617
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   328   2e-87
ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   327   4e-87
ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric...   315   1e-83
ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-l...   312   1e-82

>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
            gi|223550156|gb|EEF51643.1| polyadenylate-binding
            protein, putative [Ricinus communis]
          Length = 231

 Score =  328 bits (841), Expect = 2e-87
 Identities = 163/204 (79%), Positives = 178/204 (87%), Gaps = 11/204 (5%)
 Frame = -3

Query: 1081 QEQEHEVYGGDIPDEGDMDADIDMSRVDDEDESA-----------SKELEDMKKRLKEIE 935
            +EQEHEVYG +IPDEG+MDADIDMS   +E+E             SK+LEDMKKRLKEIE
Sbjct: 7    EEQEHEVYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIE 66

Query: 934  EEAGALREMQAKVEKEMGAVPDSSGASATLAEKEEADARSIYVGNVDYACTPEEVQQHFQ 755
            EEAGALREMQAKVEKEMGAV DSS  SAT AEKEE D+RS+YVGNVDYACTPEEVQQHFQ
Sbjct: 67   EEAGALREMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQ 126

Query: 754  SCGTVNRVTILTDKFGQPKGFAYVEFVELEAIQNALLLNESELHGRQLKVAAKRTNVPGM 575
            SCGTVNRVTILTDKFGQPKGFAYVEFVE++A+QNALLLNESELHGRQLKV+AKRTN+PGM
Sbjct: 127  SCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGM 186

Query: 574  KQFRGRPTNPYFGFRSRRPYMPGP 503
            KQ+RGR  NPY GFRSRRP+MP P
Sbjct: 187  KQYRGRRPNPYSGFRSRRPFMPAP 210


>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  328 bits (840), Expect = 2e-87
 Identities = 166/197 (84%), Positives = 178/197 (90%), Gaps = 3/197 (1%)
 Frame = -3

Query: 1084 EQEQEHEVYGGDIPDEGDMDADIDMSRVDDEDESA---SKELEDMKKRLKEIEEEAGALR 914
            E E EHEVYGG+IPDEG+MDAD+DMS   +EDE     SK+LEDMKKRLKEIEEEAGALR
Sbjct: 9    EDEHEHEVYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDLEDMKKRLKEIEEEAGALR 68

Query: 913  EMQAKVEKEMGAVPDSSGASATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNR 734
            EMQAKVEKEMGAV DS GASAT AEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNR
Sbjct: 69   EMQAKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNR 128

Query: 733  VTILTDKFGQPKGFAYVEFVELEAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGRP 554
            VTILTDKFGQPKGFAYVEFVE++AIQNALLLNESELHGRQLKV+AKRTNVPGMKQFRGR 
Sbjct: 129  VTILTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRR 188

Query: 553  TNPYFGFRSRRPYMPGP 503
             +PY G RSRRP+MP P
Sbjct: 189  PSPY-GLRSRRPFMPAP 204


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  327 bits (838), Expect = 4e-87
 Identities = 163/201 (81%), Positives = 181/201 (90%), Gaps = 4/201 (1%)
 Frame = -3

Query: 1084 EQEQEHEVYGGDIPDEGDMDAD---IDM-SRVDDEDESASKELEDMKKRLKEIEEEAGAL 917
            E E EHEVYGG+IPDEG+MDAD   +DM SR +D+ +  SK +EDM+KRLKEIEEEAGAL
Sbjct: 7    EHEHEHEVYGGEIPDEGEMDADAEDVDMVSRPEDDSDPNSKNIEDMRKRLKEIEEEAGAL 66

Query: 916  REMQAKVEKEMGAVPDSSGASATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVN 737
            REMQAKVEKEMGAV DSS ASAT AEKEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 67   REMQAKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVN 126

Query: 736  RVTILTDKFGQPKGFAYVEFVELEAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGR 557
            RVTILTDKFGQPKGFAYVEFVE++A+QNALLLNESELHGRQLKV+AKRTN+PGMKQ+RGR
Sbjct: 127  RVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGR 186

Query: 556  PTNPYFGFRSRRPYMPGPAIF 494
              NP FGFR RRP+MPGP+ +
Sbjct: 187  RPNP-FGFRGRRPFMPGPSFY 206


>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
            gi|223550153|gb|EEF51640.1| polyadenylate-binding
            protein, putative [Ricinus communis]
          Length = 234

 Score =  315 bits (808), Expect = 1e-83
 Identities = 163/220 (74%), Positives = 177/220 (80%), Gaps = 27/220 (12%)
 Frame = -3

Query: 1081 QEQEHEVYGGDIPDEGDMDADIDMSRVDDEDESA-----------SKELEDMKKRLKEIE 935
            +EQEHEVYG +IPDEG+MDADIDMS   +E+E             SK+LEDMKKRLKEIE
Sbjct: 7    EEQEHEVYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIE 66

Query: 934  EEAGALREMQAKVEKEMGAVPD----------------SSGASATLAEKEEADARSIYVG 803
            EEAGALREMQAKVEKEMGAV                  SS  SAT AEKEE D+RSIYVG
Sbjct: 67   EEAGALREMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQAEKEEVDSRSIYVG 126

Query: 802  NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVELEAIQNALLLNESELH 623
            NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE++A+QNALLLNESELH
Sbjct: 127  NVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELH 186

Query: 622  GRQLKVAAKRTNVPGMKQFRGRPTNPYFGFRSRRPYMPGP 503
            GRQLKV+AKRTN+PGMKQ+RGR  NPY GFRSRRP+MP P
Sbjct: 187  GRQLKVSAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAP 226


>ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 229

 Score =  312 bits (800), Expect = 1e-82
 Identities = 158/198 (79%), Positives = 174/198 (87%), Gaps = 8/198 (4%)
 Frame = -3

Query: 1078 EQEHEVYGGDIPDEGDMDADIDMS--RVDDEDESA------SKELEDMKKRLKEIEEEAG 923
            E EHEVYGGDIPD+ ++DAD+DMS  R D+E   A      SK+LEDMK+RLKEIEEEAG
Sbjct: 9    EHEHEVYGGDIPDDAELDADLDMSSGRADEEGYDAEPSNANSKDLEDMKRRLKEIEEEAG 68

Query: 922  ALREMQAKVEKEMGAVPDSSGASATLAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGT 743
            ALREMQAKVEKEMGAV DSS  SAT AEKEE D+RS+YVGNVDYACTPEEVQQHFQSCGT
Sbjct: 69   ALREMQAKVEKEMGAVQDSSSTSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGT 128

Query: 742  VNRVTILTDKFGQPKGFAYVEFVELEAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFR 563
            VNRVTILTDKFG PKGFAYVEFVE++A+QNALLLNESELHGRQLKV+AKRTNVPGMKQ+R
Sbjct: 129  VNRVTILTDKFGHPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYR 188

Query: 562  GRPTNPYFGFRSRRPYMP 509
            GR  NP FGFR RRP++P
Sbjct: 189  GRRPNP-FGFRGRRPFIP 205


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