BLASTX nr result

ID: Cnidium21_contig00006611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006611
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vini...    89   4e-16
emb|CBI20569.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cere...    78   6e-13

>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
 Frame = -3

Query: 329 DTNDASTSGEDENFGSESDHQSVGSHLANYIGSIHSDDSNKGVNACLETGKEAASDRKIH 150
           D  D STS +D+ F S+++ +S  SHL    G ++SD      N  LE G  +   +K  
Sbjct: 260 DVMDESTSSDDDKFLSQTEMRSTRSHLNESKGPLYSDTGKNADNTTLEIGNSSDLAKKGE 319

Query: 149 RNVGCGKHS-VSRLREVPSAFWPSWVYRMYDSYHLAQQVADMWNKIVKAP 3
            +  C K++ ++    VP AFWP WVYRMYDSY LA++ ADMW +IV AP
Sbjct: 320 GSKRCWKNTDLNHFHRVPRAFWPHWVYRMYDSYCLAERAADMWKQIVGAP 369


>ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vinifera]
          Length = 543

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 DTNDASTSGEDENFGSESDHQSVGSHLANYIGSIHSDDSNKGVNACLETGKEAASDRKIH 150
           DT D STS +D+ F  ES+ Q   SHL   IGS+H D   +   A L    ++ S  +  
Sbjct: 273 DTIDESTSSDDDKFVCESELQLGRSHLNEPIGSMHLDCERRNKKANLGIRNKSISGSQSC 332

Query: 149 RNVGCGK-HSVSRLRE---VPSAFWPSWVYRMYDSYHLAQQVADMWNKIVKAP 3
           +  G  +   V++L +   VP AFWP WVYRMYDSYHLAQ+ A MW +IV AP
Sbjct: 333 KGKGLKEGQMVTKLNQSYGVPRAFWPYWVYRMYDSYHLAQRAAGMWKQIVGAP 385


>emb|CBI20569.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
 Frame = -3

Query: 329 DTNDASTSGEDENFGSESDHQSVGSHLANYIGSIHSDDSNKGVNACLETGKEAASDRKIH 150
           DT D STS +D+ F  ES+ Q   SHL   IGS+H D   +   A L    ++ S  +  
Sbjct: 278 DTIDESTSSDDDKFVCESELQLGRSHLNEPIGSMHLDCERRNKKANLGIRNKSISGSQSC 337

Query: 149 RNVGCGK-HSVSRLRE---VPSAFWPSWVYRMYDSYHLAQQVADMWNKIVKAP 3
           +  G  +   V++L +   VP AFWP WVYRMYDSYHLAQ+ A MW +IV AP
Sbjct: 338 KGKGLKEGQMVTKLNQSYGVPRAFWPYWVYRMYDSYHLAQRAAGMWKQIVGAP 390


>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/111 (41%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 DTNDASTSGEDENFGSESDH-QSVGSHLANYIGSIHSDDSNKGVNACLETGKEAASDRKI 153
           D  D S S +D+ F S S+  +S  SHL+   GS++ D      N  LE G  +   +K 
Sbjct: 274 DMMDESMSSDDDKFMSRSEEMRSRRSHLSETEGSLYLDTGKNLGNTTLEIGNSSGLVKKG 333

Query: 152 HRNVGCGKHS-VSRLREVPSAFWPSWVYRMYDSYHLAQQVADMWNKIVKAP 3
             +  C K++ +++ R VP  FWP WVY MYDSY LA++ ADMW +IV AP
Sbjct: 334 EGSKRCWKNTDLNQFRRVPRTFWPYWVYSMYDSYCLAEKAADMWKQIVGAP 384


>ref|XP_004164765.1| PREDICTED: LOW QUALITY PROTEIN: protein cereblon-like [Cucumis
           sativus]
          Length = 546

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
 Frame = -3

Query: 320 DASTSGEDENF-GSESDHQSVGSHL--ANYIGSIHSDDSNKGVNACLETGKEAASDRKIH 150
           D+S S  DE   GSE++HQ   SHL  ++ +GS+HSD   +      + GK + S R+  
Sbjct: 276 DSSESCSDEEMSGSEAEHQHSMSHLNDSDSLGSMHSDCEKENEKPASDIGKSSTSARESS 335

Query: 149 RNVG---CGKHS-VSRLREVPSAFWPSWVYRMYDSYHLAQQVADMWNKIVKAP 3
            +     C ++S  + +  V  AFWP WVY MYDSY LAQ+ A MW +IV AP
Sbjct: 336 ESKELKRCRRNSSFNPMHRVSKAFWPYWVYSMYDSYCLAQKAAAMWKQIVGAP 388


Top