BLASTX nr result

ID: Cnidium21_contig00006607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006607
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis ...   411   e-112
emb|CAA07568.1| Mitochondrial carrier protein [Ribes nigrum]          394   e-107
ref|XP_003632130.1| PREDICTED: mitoferrin-like [Vitis vinifera] ...   394   e-107
ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|2...   393   e-107
ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protei...   383   e-104

>ref|XP_002262844.1| PREDICTED: mitoferrin-like isoform 1 [Vitis vinifera]
          Length = 327

 Score =  411 bits (1057), Expect = e-112
 Identities = 213/288 (73%), Positives = 233/288 (80%)
 Frame = -2

Query: 1184 GSVAGSIEHMAMFPVDTLKTRMQAIGXXXXXXXXAPVINLRQSLSSILKIEGLAGLYRGV 1005
            GS+AGS+EHMAMFPVDTLKTRMQ IG         P I LRQ L SILK+EG AGLYRG+
Sbjct: 43   GSIAGSVEHMAMFPVDTLKTRMQVIGGSYPA----PSIGLRQVLGSILKMEGPAGLYRGI 98

Query: 1004 AAMGIGAGPAHAVYFSVYETFKKSLLAHGNPNTSAVHAVSGVFATVASDAVITPMDVVKQ 825
            AAMG+GAGP+HAVYFSVYE  K    A GNPN SA HAVSGVFATVASDAVITPMD+VKQ
Sbjct: 99   AAMGLGAGPSHAVYFSVYELCKDFFSA-GNPNNSAAHAVSGVFATVASDAVITPMDMVKQ 157

Query: 824  RLQLKNSPYKGVCDCVKRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFATYEAAKKGLMEL 645
            RLQLK+SPYKGV DCVKRVL EEG  AFY SYRTTV+MNAPFTAVHFATYEAAK+GLME+
Sbjct: 158  RLQLKSSPYKGVMDCVKRVLMEEGIQAFYASYRTTVVMNAPFTAVHFATYEAAKRGLMEV 217

Query: 644  SPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSSCSIGDVIQ 465
            SP++ ADDE                    TPLDVVKT+LQCQGVCGCDRFSS SI DV++
Sbjct: 218  SPEN-ADDENLVVHATAGAVAGALAAAVTTPLDVVKTQLQCQGVCGCDRFSSGSIRDVLE 276

Query: 464  SIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEAAKSFFQELNGRTN 321
            +I KKDGYGGLMRGW PRMLFHAPAAAICWSTYEAAK+FF+E NGR+N
Sbjct: 277  TIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEEQNGRSN 324


>emb|CAA07568.1| Mitochondrial carrier protein [Ribes nigrum]
          Length = 289

 Score =  394 bits (1012), Expect = e-107
 Identities = 203/284 (71%), Positives = 229/284 (80%)
 Frame = -2

Query: 1184 GSVAGSIEHMAMFPVDTLKTRMQAIGXXXXXXXXAPVINLRQSLSSILKIEGLAGLYRGV 1005
            GS+AGSIEHMAM+PVDTLKTR+QAIG             LRQ+L SILK+EG AGLYRG+
Sbjct: 4    GSIAGSIEHMAMYPVDTLKTRIQAIGSCSAQSA-----GLRQALGSILKVEGPAGLYRGI 58

Query: 1004 AAMGIGAGPAHAVYFSVYETFKKSLLAHGNPNTSAVHAVSGVFATVASDAVITPMDVVKQ 825
             AMG+GAGPAHAVYFSVYE  K++  +HG+P+ S  HAVSGVFATVASDAVITPMDVVKQ
Sbjct: 59   GAMGLGAGPAHAVYFSVYEMCKETF-SHGDPSNSGAHAVSGVFATVASDAVITPMDVVKQ 117

Query: 824  RLQLKNSPYKGVCDCVKRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFATYEAAKKGLMEL 645
            RLQL++SPYKGV DCV+RVL EEG GAFY SYRTTV+MNAPFTAVHFATYEA KKGL+E+
Sbjct: 118  RLQLQSSPYKGVVDCVRRVLVEEGIGAFYASYRTTVVMNAPFTAVHFATYEATKKGLLEV 177

Query: 644  SPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSSCSIGDVIQ 465
            SP++ A+DE                    TPLDVVKT+LQCQGVCGCDRFSS SI DVI 
Sbjct: 178  SPET-ANDENLLVHATAGAAAGALAAVVTTPLDVVKTQLQCQGVCGCDRFSSSSIQDVIG 236

Query: 464  SIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEAAKSFFQELN 333
            SI KK+GY GLMRGW PRMLFHAPAAAICWSTYEA+K+FFQ+LN
Sbjct: 237  SIVKKNGYVGLMRGWIPRMLFHAPAAAICWSTYEASKTFFQKLN 280


>ref|XP_003632130.1| PREDICTED: mitoferrin-like [Vitis vinifera]
            gi|297745824|emb|CBI15880.3| unnamed protein product
            [Vitis vinifera]
          Length = 327

 Score =  394 bits (1012), Expect = e-107
 Identities = 201/290 (69%), Positives = 228/290 (78%)
 Frame = -2

Query: 1184 GSVAGSIEHMAMFPVDTLKTRMQAIGXXXXXXXXAPVINLRQSLSSILKIEGLAGLYRGV 1005
            GS+AG +EHMAMFPVDT+KTRMQ +G           ++L  +L SILK EG +GLYRG+
Sbjct: 42   GSIAGCVEHMAMFPVDTIKTRMQVLGPCPIKS-----VSLSHALRSILKTEGPSGLYRGI 96

Query: 1004 AAMGIGAGPAHAVYFSVYETFKKSLLAHGNPNTSAVHAVSGVFATVASDAVITPMDVVKQ 825
             AMG+GAGPAHAVYFS+YE FKKSL + GNPN SA HA+SGVFATVASDAV TPMD+VKQ
Sbjct: 97   GAMGLGAGPAHAVYFSIYEIFKKSL-SGGNPNNSAAHAISGVFATVASDAVFTPMDMVKQ 155

Query: 824  RLQLKNSPYKGVCDCVKRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFATYEAAKKGLMEL 645
            RLQL +SPYKGV DCV RVL EEGF AFY SYRTTVLMNAPFTAVHF+TYEAAK+GLME+
Sbjct: 156  RLQLSSSPYKGVLDCVTRVLREEGFKAFYASYRTTVLMNAPFTAVHFSTYEAAKRGLMEV 215

Query: 644  SPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSSCSIGDVIQ 465
            SPDS ADD                     TPLDVVKT+LQCQG+CGCDR+SS SI DV++
Sbjct: 216  SPDS-ADDNRVVVHATAGAAAGALAALLTTPLDVVKTQLQCQGICGCDRYSSGSIRDVLR 274

Query: 464  SIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEAAKSFFQELNGRTNPD 315
            +I KKDGY GLMRGW PRMLFHAPAAAICWSTYEA KS FQELN +++ D
Sbjct: 275  TIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAWKSIFQELNAKSDSD 324


>ref|XP_002323023.1| predicted protein [Populus trichocarpa] gi|222867653|gb|EEF04784.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  393 bits (1010), Expect = e-107
 Identities = 206/292 (70%), Positives = 228/292 (78%), Gaps = 2/292 (0%)
 Frame = -2

Query: 1184 GSVAGSIEHMAMFPVDTLKTRMQAIGXXXXXXXXAPV--INLRQSLSSILKIEGLAGLYR 1011
            GS+AGSIEHMAMFPVDTLKTRMQAI          PV  +N+RQ+  SI+K EG AG YR
Sbjct: 45   GSIAGSIEHMAMFPVDTLKTRMQAI----VGSGSYPVQNVNVRQACKSIMKNEGAAGFYR 100

Query: 1010 GVAAMGIGAGPAHAVYFSVYETFKKSLLAHGNPNTSAVHAVSGVFATVASDAVITPMDVV 831
            G+ AMG+GAGPAHAVYFSVYE  K+   + G+PN S  HAVSGV ATVASDAV TPMDVV
Sbjct: 101  GIGAMGLGAGPAHAVYFSVYELCKQ-YFSRGDPNNSVAHAVSGVCATVASDAVFTPMDVV 159

Query: 830  KQRLQLKNSPYKGVCDCVKRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFATYEAAKKGLM 651
            KQRLQLK+SPYKGV DCV+RVL EEG GAFY SY+TTV+MNAPFTAVHFATYEAAK+GL+
Sbjct: 160  KQRLQLKSSPYKGVVDCVRRVLVEEGIGAFYASYKTTVVMNAPFTAVHFATYEAAKRGLI 219

Query: 650  ELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSSCSIGDV 471
            E+SPD +ADDE                    TPLDVVKT+LQCQGVCGCDRFSS SIG+V
Sbjct: 220  EVSPD-IADDERLVVHATAGAAAGALAAIVTTPLDVVKTQLQCQGVCGCDRFSSSSIGNV 278

Query: 470  IQSIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEAAKSFFQELNGRTNPD 315
            I+ I KKDGY GLMRGW PRMLFHAPAAAICWSTYEA+K FF  LNG  NPD
Sbjct: 279  IKIIVKKDGYQGLMRGWIPRMLFHAPAAAICWSTYEASKDFFHRLNG--NPD 328


>ref|XP_003544903.1| PREDICTED: mitochondrial RNA-splicing protein MRS3-like [Glycine max]
          Length = 324

 Score =  383 bits (984), Expect = e-104
 Identities = 197/284 (69%), Positives = 221/284 (77%)
 Frame = -2

Query: 1184 GSVAGSIEHMAMFPVDTLKTRMQAIGXXXXXXXXAPVINLRQSLSSILKIEGLAGLYRGV 1005
            GS+AG +EHMAMFPVDT+KTRMQAIG           + +R +L SIL+ EG + LYRG+
Sbjct: 39   GSIAGCVEHMAMFPVDTVKTRMQAIGSCPVKS-----VTVRHALKSILQSEGPSALYRGI 93

Query: 1004 AAMGIGAGPAHAVYFSVYETFKKSLLAHGNPNTSAVHAVSGVFATVASDAVITPMDVVKQ 825
             AMG+GAGPAHAVYFSVYET KK   + G+P+ +A HA SGV ATVASDAV TPMD+VKQ
Sbjct: 94   GAMGLGAGPAHAVYFSVYETCKKKF-SEGSPSNAAAHAASGVCATVASDAVFTPMDMVKQ 152

Query: 824  RLQLKNSPYKGVCDCVKRVLFEEGFGAFYVSYRTTVLMNAPFTAVHFATYEAAKKGLMEL 645
            RLQL NS YKGV DCVKRV+ EEGFGAFY SYRTTVLMNAPFTAVHF TYEAAK+GL+E+
Sbjct: 153  RLQLGNSGYKGVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEAAKRGLLEV 212

Query: 644  SPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVVKTRLQCQGVCGCDRFSSCSIGDVIQ 465
            SP+SV DDE                    TPLDVVKT+LQCQGVCGCDRF S SIGDVI+
Sbjct: 213  SPESV-DDERLVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIK 271

Query: 464  SIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEAAKSFFQELN 333
            +I KKDGY GLMRGW PRMLFHAPAAAICWSTYEA KSFFQ+ N
Sbjct: 272  TIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFN 315



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 3/195 (1%)
 Frame = -2

Query: 890 VSGVFATVASDAVITPMDVVKQRLQLKNS-PYKGVC--DCVKRVLFEEGFGAFYVSYRTT 720
           ++G  A       + P+D VK R+Q   S P K V     +K +L  EG  A Y      
Sbjct: 37  IAGSIAGCVEHMAMFPVDTVKTRMQAIGSCPVKSVTVRHALKSILQSEGPSALYRGIGAM 96

Query: 719 VLMNAPFTAVHFATYEAAKKGLMELSPDSVADDEXXXXXXXXXXXXXXXXXXXXTPLDVV 540
            L   P  AV+F+ YE  KK   E SP + A                       TP+D+V
Sbjct: 97  GLGAGPAHAVYFSVYETCKKKFSEGSPSNAA------AHAASGVCATVASDAVFTPMDMV 150

Query: 539 KTRLQCQGVCGCDRFSSCSIGDVIQSIAKKDGYGGLMRGWAPRMLFHAPAAAICWSTYEA 360
           K RLQ  G  G        + D ++ +  ++G+G     +   +L +AP  A+ ++TYEA
Sbjct: 151 KQRLQL-GNSGYK-----GVWDCVKRVMSEEGFGAFYASYRTTVLMNAPFTAVHFTTYEA 204

Query: 359 AKSFFQELNGRTNPD 315
           AK    E++  +  D
Sbjct: 205 AKRGLLEVSPESVDD 219


Top