BLASTX nr result

ID: Cnidium21_contig00006594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006594
         (1615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34863.3| unnamed protein product [Vitis vinifera]              490   e-136
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   486   e-135
ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotei...   473   e-131
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   469   e-130
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   439   e-121

>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  490 bits (1262), Expect = e-136
 Identities = 242/478 (50%), Positives = 345/478 (72%), Gaps = 4/478 (0%)
 Frame = +1

Query: 1    AELSVPLIYYDAFGYPFYEAYSIVLYDVETNYGDIVSINDTRDG--NIYLKALQFGRALV 174
            AE+ +P+ + D  G PF+EA++++  D ETNY DIVSIN T DG  NI+LK ++ GRAL+
Sbjct: 1490 AEVKLPINFCDVLGNPFHEAFNVIPLDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALL 1549

Query: 175  RISFRNNSTKSDYLLITVGARVYPHNPLLQLGNRLNFSIEGLTNQVSGWWMSVNSSTVSI 354
            R+S  ++  KSDY+L++VGA + P NP+L LG  LNFSIEGL ++VSG W+S N S +S+
Sbjct: 1550 RVSINSSPHKSDYVLVSVGAYLSPRNPVLHLGGHLNFSIEGLKDKVSGQWLSGNESVISL 1609

Query: 355  DRVSGEAEAIAEGSTQVIYESSDFKLLTMVTVSKGYLIFVNAPKEILTNAPILTRGYSFL 534
            D +SGEA+A+ EG+TQV +E S  KL T VTV KG ++ V+AP E LTNAPI  +GY+F 
Sbjct: 1610 DVLSGEAQAVGEGTTQVFFECSSLKLQTTVTVQKGKIVLVDAPMETLTNAPIPAKGYNFS 1669

Query: 535  VTF-SEAFEHVHEAGGTINTLLHECKVDPPFVGYANPWMDY-SGMSYCLFFPYPPKHLVH 708
            V F S+ + H  E       +L +C+VDPPFVGYA PW D+ +G SYCLFFPY P+HL  
Sbjct: 1670 VKFSSDTYGHDLEGFRNDMGVLFDCRVDPPFVGYAKPWRDFGTGKSYCLFFPYSPEHLAR 1729

Query: 709  SIGNSKDIRQDISVTINASVRGANNISGSASALFVGGFAILEMDHNSLQLNLTPKADKSV 888
            S+  SKD+R  IS++I+ASV+  N++SGSASALFVGGF+ILEM     +LNLT  ++K++
Sbjct: 1730 SVPKSKDMRPYISLSISASVQETNHVSGSASALFVGGFSILEMG----KLNLTAGSNKTI 1785

Query: 889  ITVVGNTDVIVDWQGRKQLLITPIHRENHGVAGRVEYEVKVLSSERFKDKLIISLAANGQ 1068
            IT++GNTDV + W  R  ++I+P+H+E+ G+ G  +YEVKVL +++FKDK++I+L ANGQ
Sbjct: 1786 ITILGNTDVDIHWHERDSIMISPVHKEDFGIGGLAKYEVKVLQAKKFKDKVVITLPANGQ 1845

Query: 1069 KVEIDVNYEPEEMTGLPFTSNVSNWVVILVCSTVLISTLILFLYYLDRPNRYQLNVAPTT 1248
            +VE+DV+Y+P E      T  V+ W  ++ C  +L+ TL +F+++LDRP+R + +  P  
Sbjct: 1846 RVELDVSYDPGERAYSVSTVKVTLWAGVVGCIALLLLTLAIFIFFLDRPDRARPSNPPAN 1905

Query: 1249 PTVRAQSPATPSRSSTSVVNEHCPQTPQAFIDYVRKTVDETPYYRKDPRRRFNAQNTF 1422
             ++ A  P TP R S +V N+  P+TPQ F++YVR+T+ ETPYY ++ RRR N QNT+
Sbjct: 1906 SSIVA--PTTPDRRSPAVQNDSSPRTPQPFVEYVRRTIHETPYYTREGRRRVNPQNTY 1961


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  486 bits (1251), Expect = e-135
 Identities = 238/470 (50%), Positives = 340/470 (72%), Gaps = 3/470 (0%)
 Frame = +1

Query: 1    AELSVPLIYYDAFGYPFYEAYSIVLYDVETNYGDIVSINDTRDG--NIYLKALQFGRALV 174
            AE+ +P+ + D  G PF+EA++++  D ETNY DIVSIN T DG  NI+LK ++ GRAL+
Sbjct: 1565 AEVKLPINFCDVLGNPFHEAFNVIPLDAETNYPDIVSINSTGDGYGNIHLKGIRHGRALL 1624

Query: 175  RISFRNNSTKSDYLLITVGARVYPHNPLLQLGNRLNFSIEGLTNQVSGWWMSVNSSTVSI 354
            R+S  ++  KSDY+L++VGA + P NP+L LG  LNFSIEGL ++VSG W+S N S +S+
Sbjct: 1625 RVSINSSPHKSDYVLVSVGAYLSPRNPVLHLGGHLNFSIEGLKDKVSGQWLSGNESVISL 1684

Query: 355  DRVSGEAEAIAEGSTQVIYESSDFKLLTMVTVSKGYLIFVNAPKEILTNAPILTRGYSFL 534
            D +SGEA+A+ EG+TQV +E S  KL T VTV KG ++ V+AP E LTNAPI  +GY+F 
Sbjct: 1685 DVLSGEAQAVGEGTTQVFFECSSLKLQTTVTVQKGKIVLVDAPMETLTNAPIPAKGYNFS 1744

Query: 535  VTFSEAFEHVHEAGGTINTLLHECKVDPPFVGYANPWMDY-SGMSYCLFFPYPPKHLVHS 711
            V FS+ + H  E       +L +C+VDPPFVGYA PW D+ +G SYCLFFPY P+HL  S
Sbjct: 1745 VKFSDTYGHDLEGFRNDMGVLFDCRVDPPFVGYAKPWRDFGTGKSYCLFFPYSPEHLARS 1804

Query: 712  IGNSKDIRQDISVTINASVRGANNISGSASALFVGGFAILEMDHNSLQLNLTPKADKSVI 891
            +  SKD+R  IS++I+ASV+  N++SGSASALFVGGF+ILEM     +LNLT  ++K++I
Sbjct: 1805 VPKSKDMRPYISLSISASVQETNHVSGSASALFVGGFSILEMG----KLNLTAGSNKTII 1860

Query: 892  TVVGNTDVIVDWQGRKQLLITPIHRENHGVAGRVEYEVKVLSSERFKDKLIISLAANGQK 1071
            T++GNTDV + W  R  ++I+P+H+E+ G+ G  +YEVKVL +++FKDK++I+L ANGQ+
Sbjct: 1861 TILGNTDVDIHWHERDSIMISPVHKEDFGIGGLAKYEVKVLQAKKFKDKVVITLPANGQR 1920

Query: 1072 VEIDVNYEPEEMTGLPFTSNVSNWVVILVCSTVLISTLILFLYYLDRPNRYQLNVAPTTP 1251
            VE+DV+Y+P E      T  V+ W  ++ C  +L+ TL +F+++LDRP+R + +  P   
Sbjct: 1921 VELDVSYDPGERAYSVSTVKVTLWAGVVGCIALLLLTLAIFIFFLDRPDRARPSNPPANS 1980

Query: 1252 TVRAQSPATPSRSSTSVVNEHCPQTPQAFIDYVRKTVDETPYYRKDPRRR 1401
            ++ A  P TP R S +V N+  P+TPQ F++YVR+T+ ETPYY ++ RRR
Sbjct: 1981 SIVA--PTTPDRRSPAVQNDSSPRTPQPFVEYVRRTIHETPYYTREGRRR 2028


>ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
          Length = 2304

 Score =  473 bits (1217), Expect = e-131
 Identities = 240/477 (50%), Positives = 331/477 (69%), Gaps = 4/477 (0%)
 Frame = +1

Query: 1    AELSVPLIYYDAFGYPFYEAYSIVLYDVETNYGDIVSINDTRDG--NIYLKALQFGRALV 174
            AEL +P  +YDA G PF+EAY+ V +  ETNY D++ +N T DG  N+++KA+Q G+ALV
Sbjct: 1509 AELDLPTSFYDALGNPFHEAYNAVPFYAETNYPDVLCVNKTADGKGNVHIKAIQHGKALV 1568

Query: 175  RISFRNNSTKSDYLLITVGARVYPHNPLLQLGNRLNFSIEGLTNQVSGWWMSVNSSTVSI 354
            R++   +  KSDY+LI VGA +YP NP+L +G+ LN SI+GL++ +SG W + N S +S+
Sbjct: 1569 RVAISEDLQKSDYVLIRVGAHIYPQNPVLHIGSPLNLSIKGLSDTISGQWFTTNGSVISV 1628

Query: 355  DRVSGEAEAIAEGSTQVIYESSDFKLLTMVTVSKGYLIFVNAPKEILTNAPILTRGYSFL 534
            D +SG A+AI EGS QV +     +L T +TV KG  IFVNAPKE LTN P  ++GY+F 
Sbjct: 1629 DTLSGMAKAIGEGSAQVSFHYGRLRLQTTITVLKGNYIFVNAPKETLTNVPYPSKGYNFS 1688

Query: 535  VTFSEAFEHVHEAGGTINTLLHECKVDPPFVGYANPWMDY-SGMSYCLFFPYPPKHLVHS 711
            V FSE+      A G    +L  C+VDP FVGY  PW+D  SG SYCLFFPY P+HLVHS
Sbjct: 1689 VKFSESL----GAPGEKKRILFNCRVDPLFVGYVKPWLDQDSGNSYCLFFPYSPEHLVHS 1744

Query: 712  IGNSKDIRQDISVTINASVRGANNISGSASALFVGGFAILEMDHNSLQLNLTPKADKSVI 891
            +   + +R D+S++I+AS+    ++SGSASALF+GGF+I+EM     +LNLTP ++K+ I
Sbjct: 1745 VPKLEGMRPDVSLSISASLE-HEHVSGSASALFIGGFSIMEMS----KLNLTPGSNKTCI 1799

Query: 892  TVVGNTDVIVDWQGRKQLLITPIHRENHGVAGRVEYEVKVLSSERFKDKLIISLAANGQK 1071
            TV+GNTDV + W  R  ++I+ IH+E+ G+ G   YEVK+L ++RFKD++II+L ANGQ 
Sbjct: 1800 TVLGNTDVEIHWHHRDLIMISLIHKEDFGIRGFARYEVKLLKAKRFKDRIIITLPANGQS 1859

Query: 1072 VEIDVNYEPEEMTGLPFTSNVSNWVVILVCSTVLISTLILFLYYLDRPNRYQLNVAPTTP 1251
            VEID+N+EPEE      T N + W  IL    +LI ++ +   +LDRP R Q   +  T 
Sbjct: 1860 VEIDINHEPEETASSSVTINKAFWASILGYLLLLILSIAIITRFLDRPERSQQTSSSVTT 1919

Query: 1252 TVRAQSPATPSRSS-TSVVNEHCPQTPQAFIDYVRKTVDETPYYRKDPRRRFNAQNT 1419
            T    +P TP RS+ +SVVN+  P+TPQ F+DYVRKT+DETPYY+++ RRR N QNT
Sbjct: 1920 TPSIAAPTTPDRSTPSSVVNDSSPRTPQPFVDYVRKTIDETPYYKREGRRRINPQNT 1976


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  469 bits (1208), Expect = e-130
 Identities = 244/469 (52%), Positives = 333/469 (71%), Gaps = 3/469 (0%)
 Frame = +1

Query: 4    ELSVPLIYYDAFGYPFYEAYSIVLYDVETNYGDIVSINDTRDGN--IYLKALQFGRALVR 177
            EL + + Y+DA G PFYEA++ V Y  ETNY DIVSI+DT+  +  I+LKAL++GRAL+R
Sbjct: 1469 ELDLSISYFDALGNPFYEAHNAVSYHAETNYHDIVSIDDTKTDSEKIHLKALRYGRALLR 1528

Query: 178  ISFRNNSTKSDYLLITVGARVYPHNPLLQLGNRLNFSIEGLTNQVSGWWMSVNSSTVSID 357
            +SF++N  KSD++LI+VGA ++P NP+L  G+ L+FSIEG  +QVSG W+S N S +SID
Sbjct: 1529 VSFKDNQQKSDFILISVGANIFPQNPVLHQGSSLHFSIEG--SQVSGHWLSANESVISID 1586

Query: 358  RVSGEAEAIAEGSTQVIYESSDFKLLTMVTVSKGYLIFVNAPKEILTNAPILTRGYSFLV 537
              SG+A+A   GSTQVI+ES   KL T VTV  G ++ V+APKE LTN P  T+GYSF V
Sbjct: 1587 MPSGKAKAAGIGSTQVIFESPSMKLQTTVTVVSGNIVSVDAPKETLTNVPYPTKGYSFSV 1646

Query: 538  TFSEAFEHVHEAGGTINTLLHECKVDPPFVGYANPWMDY-SGMSYCLFFPYPPKHLVHSI 714
             FS+     +  G +   + ++CKVDPPFVGYA PWM+  +G SYCLFFPY P+HLV SI
Sbjct: 1647 KFSDTCNKFNAVGNS-KEISYDCKVDPPFVGYAKPWMNLETGNSYCLFFPYSPEHLVRSI 1705

Query: 715  GNSKDIRQDISVTINASVRGANNISGSASALFVGGFAILEMDHNSLQLNLTPKADKSVIT 894
               KD+R  ISV+INAS+R A++ISGSASALF+GGF+ILEMD    +LNLTP+++KSV+T
Sbjct: 1706 PRLKDMRPYISVSINASLREASHISGSASALFIGGFSILEMD----KLNLTPESNKSVLT 1761

Query: 895  VVGNTDVIVDWQGRKQLLITPIHRENHGVAGRVEYEVKVLSSERFKDKLIISLAANGQKV 1074
            ++GN+DV + W  R  + I P+HRE+ G+  R +YEVKVL  +RFKDK+II+L ANGQ+V
Sbjct: 1762 ILGNSDVDIQWHSRDVINIIPVHREDLGIGSRTQYEVKVLRPKRFKDKIIITLPANGQRV 1821

Query: 1075 EIDVNYEPEEMTGLPFTSNVSNWVVILVCSTVLISTLILFLYYLDRPNRYQLNVAPTTPT 1254
            EIDVNYEP+           +    I+ C   ++  + +F      PNR + + +  T  
Sbjct: 1822 EIDVNYEPDARAVPKTIFKGAFLPTIVACFGAVLGIIFVFQNLFRMPNRTRSHTSLATQN 1881

Query: 1255 VRAQSPATPSRSSTSVVNEHCPQTPQAFIDYVRKTVDETPYYRKDPRRR 1401
            + A  P TP RSS  V+++  P+TPQ F+DYVR+T+DETP+Y+++ RRR
Sbjct: 1882 ITA--PHTPERSS-PVLSDQSPRTPQPFVDYVRRTIDETPFYKREARRR 1927


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  439 bits (1130), Expect = e-121
 Identities = 240/480 (50%), Positives = 326/480 (67%), Gaps = 15/480 (3%)
 Frame = +1

Query: 19   LIYYDAF--GYPFYEAYSIVLYDVETNYGDIVSINDTRDGN--IYLKALQFGRALVRISF 186
            L YY  F  G  F+EA+ +VL  VETNY DIVS+N + + N  IYLKA + GRALV++S 
Sbjct: 1453 LNYYQCFXLGNIFHEAHDVVLSYVETNYPDIVSVNYSSEDNGYIYLKARKHGRALVQVSI 1512

Query: 187  RNNSTKSDYLLITVGARVYPHNPLLQLGNRLNFSIEGLTNQVSGWWMSVNSSTVSIDRVS 366
              N  KSDY+LI+VGA ++P +P++ +G+ LNFSI+G  +Q SG W+S N S +S+D +S
Sbjct: 1513 DKNPEKSDYILISVGALIHPQDPVIHVGSHLNFSIKG--SQFSGRWISTNESVLSVDMLS 1570

Query: 367  GEAEAIAEGSTQVIYESSDFKLLTMVTVSKGYLIFVNAPKEILTNAPILTRGYSFLVTFS 546
            G AEA+  GST+V++E S+  L T V V  G+ + V AP E LTN P   +GY+F V FS
Sbjct: 1571 GIAEAVGPGSTEVLFEGSNLNLRTTVIVQTGHTLSVVAPVEFLTNVPFPAKGYNFSVNFS 1630

Query: 547  EAFEHVHEAGGTINT--LLHECKVDPPFVGYANPWMDYS-GMSYCLFFPYPPKHLVHSIG 717
                   ++G   N   +LH+C+VDPPFVGYA PW+D     SYCLFFPY P+HL  S  
Sbjct: 1631 G------QSGALPNDKRVLHDCRVDPPFVGYAKPWLDLDYDNSYCLFFPYSPEHLARSAT 1684

Query: 718  NSKDIRQDISVTINASVRGANNISGSASALFVGGFAILEMDH-NSLQLNLTPKADKSVIT 894
             SK +R DISVTI AS R ++ I GSASALFVGGF+++EMD  ++ QL LTP ++K+ IT
Sbjct: 1685 KSKAMRPDISVTIYASSRESSQIFGSASALFVGGFSVMEMDKVSATQLILTPDSNKTAIT 1744

Query: 895  VVGNTDVIVDWQGRKQLLITPIHRENHGVAGRVEYEVKVLSSERFKDKLIISLAANGQKV 1074
            ++GNTDV + W  R  +++ PI +E   V GR EYEVK + ++RF+DK++I+LAANGQ+ 
Sbjct: 1745 ILGNTDVELHWHERDLVIVGPISKEESRVGGRAEYEVKAMGTKRFRDKILITLAANGQRT 1804

Query: 1075 EIDVNYEPEEMTGLPFTSNVSN-WVVILVCSTVLISTLILFLYYLDRPNRYQLN-----V 1236
            EIDV Y+P E        + +  W  +L   ++LI T+ LF+ YLD+PNR Q +     +
Sbjct: 1805 EIDVVYDPGEKEASETVFDTTTIWATVLGSLSLLILTITLFICYLDKPNRAQPSQPSWPL 1864

Query: 1237 APT-TPTVRAQSPATPSRSSTSVVNEHCPQTPQAFIDYVRKTVDETPYYRKDPRRRFNAQ 1413
            A T TPTV A  P TP RSS  + NE  P+TPQ F+DYVR+T+DETPYY+++ RRRFN +
Sbjct: 1865 ATTHTPTVAA--PRTPDRSSPVISNEQSPRTPQPFVDYVRQTIDETPYYKREGRRRFNVK 1922


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