BLASTX nr result

ID: Cnidium21_contig00006586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006586
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU56179.1| transcription initiation factor TFIID subunit [Ja...   216   6e-54
ref|XP_002275358.1| PREDICTED: transcription initiation factor T...   213   5e-53
ref|XP_002515305.1| Transcription initiation factor TFIID subuni...   211   1e-52
gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]     208   1e-51
gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]           206   3e-51

>gb|ADU56179.1| transcription initiation factor TFIID subunit [Jatropha curcas]
          Length = 128

 Score =  216 bits (549), Expect = 6e-54
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = -1

Query: 594 MSNSAAGSSSKTKVGLSQQSEPSFKRKRAVFQKDLQHMMYGFGDDPNPLPESMALLEDIV 415
           M+N +AG SSK+KVG SQ SE SFKRKR VFQKDLQHMMYGFGDDPNPLPE++AL+EDIV
Sbjct: 1   MNNLSAGPSSKSKVGTSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIV 60

Query: 414 VEYVTDLVHKAQDIASKRGKLLTEDFLYLVRKDAPKFNRCTELLSMNEELKQARKAFDVD 235
           VEYVTDL HKAQDI SKRGKLL EDFLYL+RKD PK NRCTELLSM EELKQARKAF+VD
Sbjct: 61  VEYVTDLAHKAQDIGSKRGKLLVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEVD 120

Query: 234 EEKLATID 211
           EEKLA+I+
Sbjct: 121 EEKLASIE 128


>ref|XP_002275358.1| PREDICTED: transcription initiation factor TFIID subunit 13-like
           isoform 3 [Vitis vinifera]
           gi|225437519|ref|XP_002275335.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 2 [Vitis vinifera]
           gi|225437521|ref|XP_002275286.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           isoform 1 [Vitis vinifera]
           gi|359480146|ref|XP_003632408.1| PREDICTED:
           transcription initiation factor TFIID subunit 13-like
           [Vitis vinifera]
          Length = 128

 Score =  213 bits (541), Expect = 5e-53
 Identities = 105/128 (82%), Positives = 117/128 (91%)
 Frame = -1

Query: 594 MSNSAAGSSSKTKVGLSQQSEPSFKRKRAVFQKDLQHMMYGFGDDPNPLPESMALLEDIV 415
           M++S+AG SSK + G SQ S+ SFKRKR VFQKDLQHMMYGFGDD NPLPE++ALLEDIV
Sbjct: 1   MNSSSAGPSSKPRAGSSQPSDSSFKRKRGVFQKDLQHMMYGFGDDANPLPETVALLEDIV 60

Query: 414 VEYVTDLVHKAQDIASKRGKLLTEDFLYLVRKDAPKFNRCTELLSMNEELKQARKAFDVD 235
           VEYVTDLVHKAQ+ ASKRGKLLTEDFL+L+RKD PK NRCTELLSMNEELKQARKAFDVD
Sbjct: 61  VEYVTDLVHKAQETASKRGKLLTEDFLFLMRKDLPKLNRCTELLSMNEELKQARKAFDVD 120

Query: 234 EEKLATID 211
           EEKLAT++
Sbjct: 121 EEKLATME 128


>ref|XP_002515305.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223545785|gb|EEF47289.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 128

 Score =  211 bits (537), Expect = 1e-52
 Identities = 105/128 (82%), Positives = 113/128 (88%)
 Frame = -1

Query: 594 MSNSAAGSSSKTKVGLSQQSEPSFKRKRAVFQKDLQHMMYGFGDDPNPLPESMALLEDIV 415
           MS+S  G SSK+KVG SQ SE SFKRKR VFQKDLQHMMYGFGDDPNPLPES+AL+EDIV
Sbjct: 1   MSSSFTGPSSKSKVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPESVALVEDIV 60

Query: 414 VEYVTDLVHKAQDIASKRGKLLTEDFLYLVRKDAPKFNRCTELLSMNEELKQARKAFDVD 235
           VEYVTDL HKAQDI SKRGKL  EDFLYL+RKD PK NRCTELLSM EELKQARKAF+VD
Sbjct: 61  VEYVTDLAHKAQDIGSKRGKLSVEDFLYLIRKDLPKLNRCTELLSMQEELKQARKAFEVD 120

Query: 234 EEKLATID 211
           EEKLA+ +
Sbjct: 121 EEKLASAE 128


>gb|AFL48184.1| TBP-associated factor 13 protein [Capsicum annuum]
          Length = 130

 Score =  208 bits (529), Expect = 1e-51
 Identities = 100/125 (80%), Positives = 114/125 (91%)
 Frame = -1

Query: 594 MSNSAAGSSSKTKVGLSQQSEPSFKRKRAVFQKDLQHMMYGFGDDPNPLPESMALLEDIV 415
           M+NS+AG SSK + G SQ SE S KRKR +FQKDLQHMMYGFGDD NPLPE++AL+EDIV
Sbjct: 1   MNNSSAGPSSKARAGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIV 60

Query: 414 VEYVTDLVHKAQDIASKRGKLLTEDFLYLVRKDAPKFNRCTELLSMNEELKQARKAFDVD 235
           V+YVTD+VHKAQD+A+KRGKLLTEDFL+L+RKD PK NRCTELLSMNEELKQARKAF+VD
Sbjct: 61  VDYVTDMVHKAQDVATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVD 120

Query: 234 EEKLA 220
           EEKLA
Sbjct: 121 EEKLA 125


>gb|AEE36479.1| TBP-associated factor 13 [Solanum melongena]
          Length = 128

 Score =  206 bits (525), Expect = 3e-51
 Identities = 99/123 (80%), Positives = 113/123 (91%)
 Frame = -1

Query: 594 MSNSAAGSSSKTKVGLSQQSEPSFKRKRAVFQKDLQHMMYGFGDDPNPLPESMALLEDIV 415
           M+N++AG SSK +VG SQ SE S KRKR +FQKDLQHMMYGFGDD NPLPE++AL+EDIV
Sbjct: 1   MNNTSAGPSSKARVGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVALVEDIV 60

Query: 414 VEYVTDLVHKAQDIASKRGKLLTEDFLYLVRKDAPKFNRCTELLSMNEELKQARKAFDVD 235
           V+YVTD+VHKAQD+ASKRGKLLTEDFL+L+RKD PK NRCTELLSMNEELKQARKAF+VD
Sbjct: 61  VDYVTDMVHKAQDVASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVD 120

Query: 234 EEK 226
           EEK
Sbjct: 121 EEK 123


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