BLASTX nr result

ID: Cnidium21_contig00006585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006585
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vit...   115   6e-24
ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isof...   114   2e-23
gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis]        110   1e-22
gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]           110   1e-22
ref|XP_002511333.1| 60S ribosomal protein L27a, putative [Ricinu...   110   2e-22

>ref|XP_002274098.1| PREDICTED: 60S ribosomal protein L27a-3 [Vitis vinifera]
           gi|147783378|emb|CAN59887.1| hypothetical protein
           VITISV_026169 [Vitis vinifera]
          Length = 146

 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/69 (82%), Positives = 63/69 (91%), Gaps = 2/69 (2%)
 Frame = -3

Query: 588 NKFYCPIVNIDKLWSMVPQDVKENASGDKAPVLDVTQLGYFKVLGKGSV--SKPIVVKAK 415
           NKFYCPIVNIDKLWSMVPQDVK+ AS D AP++DVTQ GYFKVLGKG++  S+PIVVKAK
Sbjct: 66  NKFYCPIVNIDKLWSMVPQDVKDKASPDNAPLIDVTQFGYFKVLGKGALPSSQPIVVKAK 125

Query: 414 LVSKIAEKK 388
           LVSKIAEKK
Sbjct: 126 LVSKIAEKK 134


>ref|XP_002281019.1| PREDICTED: 60S ribosomal protein L27a-3 isoform 1 [Vitis vinifera]
           gi|359491222|ref|XP_003634245.1| PREDICTED: 60S
           ribosomal protein L27a-3 isoform 2 [Vitis vinifera]
           gi|147859771|emb|CAN78902.1| hypothetical protein
           VITISV_026450 [Vitis vinifera]
          Length = 146

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/69 (79%), Positives = 63/69 (91%), Gaps = 2/69 (2%)
 Frame = -3

Query: 588 NKFYCPIVNIDKLWSMVPQDVKENASGDKAPVLDVTQLGYFKVLGKGSV--SKPIVVKAK 415
           NKFYCPIVNIDKLWS++PQDVK+ AS + AP++DVTQ GYFKVLGKG++  SKPIVVKAK
Sbjct: 66  NKFYCPIVNIDKLWSLIPQDVKDKASPENAPLIDVTQFGYFKVLGKGALPESKPIVVKAK 125

Query: 414 LVSKIAEKK 388
           LVSKIAEKK
Sbjct: 126 LVSKIAEKK 134


>gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis]
          Length = 146

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/69 (76%), Positives = 62/69 (89%), Gaps = 2/69 (2%)
 Frame = -3

Query: 588 NKFYCPIVNIDKLWSMVPQDVKENASGDKAPVLDVTQLGYFKVLGKGSV--SKPIVVKAK 415
           NKFYCPIVNIDKLWS++PQ+VK+ AS D  P++DVTQ GYFKVLGKG++  +KPIVVKAK
Sbjct: 66  NKFYCPIVNIDKLWSLIPQEVKDKASKDNVPMIDVTQYGYFKVLGKGALPENKPIVVKAK 125

Query: 414 LVSKIAEKK 388
           LVSKIAEKK
Sbjct: 126 LVSKIAEKK 134


>gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]
          Length = 146

 Score =  110 bits (276), Expect = 1e-22
 Identities = 55/69 (79%), Positives = 61/69 (88%), Gaps = 2/69 (2%)
 Frame = -3

Query: 588 NKFYCPIVNIDKLWSMVPQDVKENASGDKAPVLDVTQLGYFKVLGKGSV--SKPIVVKAK 415
           NKFYCPIVNIDKLWSMVPQ+VK+ AS D  P+LDVTQ GYFKVLGKG +  ++PIVVKAK
Sbjct: 66  NKFYCPIVNIDKLWSMVPQEVKDKASKDNVPMLDVTQFGYFKVLGKGVLPENQPIVVKAK 125

Query: 414 LVSKIAEKK 388
           LVSKIAEKK
Sbjct: 126 LVSKIAEKK 134


>ref|XP_002511333.1| 60S ribosomal protein L27a, putative [Ricinus communis]
           gi|223550448|gb|EEF51935.1| 60S ribosomal protein L27a,
           putative [Ricinus communis]
          Length = 146

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/69 (78%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
 Frame = -3

Query: 588 NKFYCPIVNIDKLWSMVPQDVKENASGDKAPVLDVTQLGYFKVLGKGSV--SKPIVVKAK 415
           NKFYCPIVNIDKLWSMVP+D KE AS D  P++DVT+ GYFKVLGKG +  +KPIVVKAK
Sbjct: 66  NKFYCPIVNIDKLWSMVPEDAKEKASKDNVPMVDVTEFGYFKVLGKGVLPENKPIVVKAK 125

Query: 414 LVSKIAEKK 388
           LVSKIAEKK
Sbjct: 126 LVSKIAEKK 134


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