BLASTX nr result

ID: Cnidium21_contig00006576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006576
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25596.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...    58   9e-07
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]    58   9e-07
ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>emb|CBI25596.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/102 (40%), Positives = 51/102 (50%)
 Frame = +1

Query: 208 MAGMLPGVESARRRRCHGTSAGWADSQSSSFLESSKNSRRXXXXXXXXXXXXXXXXXQKR 387
           MAGMLPGVE ARRRR H  S G +DS + +    ++ S                    +R
Sbjct: 1   MAGMLPGVECARRRRFH-QSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQR 59

Query: 388 TVNKYXXXXXXXXXXKLGGAAREAKERLDERLRSQYRKFETK 513
           +V             KLGG AREAKERLDERLR+Q +   T+
Sbjct: 60  SV-----LNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTR 96


>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/102 (40%), Positives = 51/102 (50%)
 Frame = +1

Query: 208 MAGMLPGVESARRRRCHGTSAGWADSQSSSFLESSKNSRRXXXXXXXXXXXXXXXXXQKR 387
           MAGMLPGVE ARRRR H  S G +DS + +    ++ S                    +R
Sbjct: 1   MAGMLPGVECARRRRFH-QSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQR 59

Query: 388 TVNKYXXXXXXXXXXKLGGAAREAKERLDERLRSQYRKFETK 513
           +V             KLGG AREAKERLDERLR+Q +   T+
Sbjct: 60  SV-----LNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTR 96


>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
          Length = 193

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/102 (40%), Positives = 51/102 (50%)
 Frame = +1

Query: 208 MAGMLPGVESARRRRCHGTSAGWADSQSSSFLESSKNSRRXXXXXXXXXXXXXXXXXQKR 387
           MAGMLPGVE ARRRR H  S G +DS + +    ++ S                    +R
Sbjct: 1   MAGMLPGVECARRRRFH-QSGGCSDSPTVAVHGCTRRSSFCLYTSNHENHHATSSSSMQR 59

Query: 388 TVNKYXXXXXXXXXXKLGGAAREAKERLDERLRSQYRKFETK 513
           +V             KLGG AREAKERLDERLR+Q +   T+
Sbjct: 60  SV-----LNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTR 96


>ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|222866006|gb|EEF03137.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/105 (40%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
 Frame = +1

Query: 208 MAGMLPGVESARRRRCHGT-------SAGWADSQSSSFLESSKNSRRXXXXXXXXXXXXX 366
           MAGMLPGVE ARRRR H +       + GW+   S     SS  S               
Sbjct: 1   MAGMLPGVECARRRRFHQSGDSLGAPAHGWSRKPSFCLYTSSHESYHGSVSSL------- 53

Query: 367 XXXXQKRTVNKYXXXXXXXXXXKLGGAAREAKERLDERLRSQYRK 501
                +R+V+            KLGG AREAKERLDERLR Q +K
Sbjct: 54  -----QRSVSSQAYEDE-----KLGGVAREAKERLDERLRLQKKK 88