BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006574
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311451.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_002315948.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch...   162   9e-38
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl...   159   7e-37
emb|CBI33662.3| unnamed protein product [Vitis vinifera]              159   7e-37

>ref|XP_002311451.1| predicted protein [Populus trichocarpa] gi|222851271|gb|EEE88818.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  176 bits (447), Expect = 4e-42
 Identities = 102/177 (57%), Positives = 118/177 (66%), Gaps = 16/177 (9%)
 Frame = -2

Query: 719 MLSMSVQTGIKGTFTCPTLP----SCNVKHQALSLPHFNNFVIKSKPFRR-----IRSLC 567
           MLSM+ Q+G+   FT  +LP    SC      +S+    N +  S  F R      R+  
Sbjct: 1   MLSMAFQSGVNNVFTYYSLPCRTPSCKTFKATISVNPKPNPIRSSTFFDRERRHVSRNQR 60

Query: 566 XXXXXXXXALVSETPVDG----SASESVPAQ---KLKVGVKEVEKPTLVLKFIWMEKNIG 408
                   AL +ETP D     +A ES+P Q   K ++ VK+VEKP LVLKF+WMEKNIG
Sbjct: 61  YTTFAVPEALAAETPADAPPSNAAGESIPIQETEKAELVVKQVEKPRLVLKFVWMEKNIG 120

Query: 407 LALDQKIPGHGTVPLSPYYFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 237
           LALDQ IPGHGTVPLSPY+FWPRKDAWEELK TLESKPWISQKKMIILLNQATDIIN
Sbjct: 121 LALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIIN 177


>ref|XP_002315948.1| predicted protein [Populus trichocarpa] gi|222864988|gb|EEF02119.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  174 bits (442), Expect = 2e-41
 Identities = 104/178 (58%), Positives = 117/178 (65%), Gaps = 17/178 (9%)
 Frame = -2

Query: 719 MLSMSVQTGIKGTFTCPTLP----SCNVKHQALS------LPHFNNFVIKSKPFRRIRSL 570
           MLS++ Q G    FT  +LP    SC       S      L H + F+ + +  R  R+ 
Sbjct: 1   MLSVAFQCGFSNVFTNSSLPCQTPSCKTFKATFSTNPKPNLIHSSTFLDRKRK-RVSRNQ 59

Query: 569 CXXXXXXXXALVSETPVDGSAS----ESVPAQ---KLKVGVKEVEKPTLVLKFIWMEKNI 411
                    AL  ETP+D   S    ES+PAQ   K +V VK+VEKP LVLKFIWMEKNI
Sbjct: 60  RYTTFAAPEALTVETPIDTPPSTETEESIPAQGTEKAEVLVKQVEKPRLVLKFIWMEKNI 119

Query: 410 GLALDQKIPGHGTVPLSPYYFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 237
           GLALDQ IPGHGTVPLSPY+FWPRKDAWEELK TLESKPWISQKKMIILLNQATDIIN
Sbjct: 120 GLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIIN 177


>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
           putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
           Plastid-specific 30S ribosomal protein 3, chloroplast
           precursor, putative [Ricinus communis]
          Length = 180

 Score =  162 bits (410), Expect = 9e-38
 Identities = 88/169 (52%), Positives = 105/169 (62%), Gaps = 11/169 (6%)
 Frame = -2

Query: 710 MSVQTGIKGTFTCPTLPSCNVKHQALSLPHFNNFVI-----------KSKPFRRIRSLCX 564
           M++Q+G+    T   +P      +++    F N  I           K +P  R   L  
Sbjct: 1   MAIQSGVSSILTYSPVPHRTPFCKSIKTSIFANPKISLLYSSTILDPKMRPISRNERLTT 60

Query: 563 XXXXXXXALVSETPVDGSASESVPAQKLKVGVKEVEKPTLVLKFIWMEKNIGLALDQKIP 384
                   +  +T            +K++V VK+VEKP LVLKFIWMEKNIGLALDQ IP
Sbjct: 61  FASPEALTVEDKTSETEEPISDDIIEKVEVAVKQVEKPRLVLKFIWMEKNIGLALDQVIP 120

Query: 383 GHGTVPLSPYYFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 237
           GHGT+PLSPY+FWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN
Sbjct: 121 GHGTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 169


>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
           [Vitis vinifera] gi|359488272|ref|XP_003633730.1|
           PREDICTED: 30S ribosomal protein 3, chloroplastic-like
           isoform 2 [Vitis vinifera]
          Length = 176

 Score =  159 bits (402), Expect = 7e-37
 Identities = 86/165 (52%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
 Frame = -2

Query: 719 MLSMSVQTGIKGTFTCPTLPSCNVKHQALSLPHFNNFVIKSKPFR----RIRSLCXXXXX 552
           MLSM+VQ          T P  + ++  L     N   + S        R+R+       
Sbjct: 2   MLSMAVQPNPNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRLRASPAPVVA 61

Query: 551 XXXALVSETPVDGSASESVPAQKLKVGVKEVEKPTLVLKFIWMEKNIGLALDQKIPGHGT 372
              +  S  P +  ++  +  +KL V VK +EKP LVLKFIWMEKNIG+ALDQ IPGHGT
Sbjct: 62  VAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGT 121

Query: 371 VPLSPYYFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 237
           +PLSPYYFWPRKDAWEE+K  LESKPWISQK+MIILLNQATDIIN
Sbjct: 122 IPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIIN 166


>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  159 bits (402), Expect = 7e-37
 Identities = 86/165 (52%), Positives = 104/165 (63%), Gaps = 4/165 (2%)
 Frame = -2

Query: 719 MLSMSVQTGIKGTFTCPTLPSCNVKHQALSLPHFNNFVIKSKPFR----RIRSLCXXXXX 552
           MLSM+VQ          T P  + ++  L     N   + S        R+R+       
Sbjct: 1   MLSMAVQPNPNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRLRASPAPVVA 60

Query: 551 XXXALVSETPVDGSASESVPAQKLKVGVKEVEKPTLVLKFIWMEKNIGLALDQKIPGHGT 372
              +  S  P +  ++  +  +KL V VK +EKP LVLKFIWMEKNIG+ALDQ IPGHGT
Sbjct: 61  VAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQAIPGHGT 120

Query: 371 VPLSPYYFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIIN 237
           +PLSPYYFWPRKDAWEE+K  LESKPWISQK+MIILLNQATDIIN
Sbjct: 121 IPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIIN 165