BLASTX nr result

ID: Cnidium21_contig00006562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006562
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23872.3| unnamed protein product [Vitis vinifera]              215   3e-54
ref|XP_002276384.1| PREDICTED: 3-isopropylmalate dehydrogenase, ...   215   3e-54
ref|XP_002530452.1| 3-isopropylmalate dehydrogenase, putative [R...   210   1e-52
ref|XP_002298230.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
sp|P29102.1|LEU3_BRANA RecName: Full=3-isopropylmalate dehydroge...   206   2e-51

>emb|CBI23872.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  215 bits (547), Expect = 3e-54
 Identities = 107/119 (89%), Positives = 111/119 (93%)
 Frame = -2

Query: 358 LAASFHGVEFGFKEMPVGGAALDLTGVPLPEETLSQARNSDAVLLGAIGGYKWDNNEKHL 179
           LA S  G+EFGF+EMPVGG ALDLTGVPLPEETL  A+ SDAVLLGAIGGYKWD+NEKHL
Sbjct: 168 LAGSLEGIEFGFQEMPVGGCALDLTGVPLPEETLLVAKQSDAVLLGAIGGYKWDSNEKHL 227

Query: 178 KPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           KPETGLLQLR GLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP
Sbjct: 228 KPETGLLQLRSGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 286


>ref|XP_002276384.1| PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic [Vitis
           vinifera]
          Length = 405

 Score =  215 bits (547), Expect = 3e-54
 Identities = 107/119 (89%), Positives = 111/119 (93%)
 Frame = -2

Query: 358 LAASFHGVEFGFKEMPVGGAALDLTGVPLPEETLSQARNSDAVLLGAIGGYKWDNNEKHL 179
           LA S  G+EFGF+EMPVGG ALDLTGVPLPEETL  A+ SDAVLLGAIGGYKWD+NEKHL
Sbjct: 67  LAGSLEGIEFGFQEMPVGGCALDLTGVPLPEETLLVAKQSDAVLLGAIGGYKWDSNEKHL 126

Query: 178 KPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           KPETGLLQLR GLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP
Sbjct: 127 KPETGLLQLRSGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 185


>ref|XP_002530452.1| 3-isopropylmalate dehydrogenase, putative [Ricinus communis]
           gi|223529997|gb|EEF31922.1| 3-isopropylmalate
           dehydrogenase, putative [Ricinus communis]
          Length = 406

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/119 (85%), Positives = 112/119 (94%)
 Frame = -2

Query: 358 LAASFHGVEFGFKEMPVGGAALDLTGVPLPEETLSQARNSDAVLLGAIGGYKWDNNEKHL 179
           LA +  G+EF F+EMP+GG+ALDL GVPLP+ETLS A+ SDAVLLGAIGGYKWDNNEKHL
Sbjct: 68  LAGNLEGIEFSFQEMPMGGSALDLVGVPLPDETLSVAKQSDAVLLGAIGGYKWDNNEKHL 127

Query: 178 KPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           KPETGLLQLREGL+VFANLRPA+VLPQLVDASTLKKEVAEGVD+MVVRELTGGIYFGKP
Sbjct: 128 KPETGLLQLREGLEVFANLRPATVLPQLVDASTLKKEVAEGVDVMVVRELTGGIYFGKP 186


>ref|XP_002298230.1| predicted protein [Populus trichocarpa] gi|222845488|gb|EEE83035.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/119 (84%), Positives = 110/119 (92%)
 Frame = -2

Query: 358 LAASFHGVEFGFKEMPVGGAALDLTGVPLPEETLSQARNSDAVLLGAIGGYKWDNNEKHL 179
           LA S  G+EF F+EMP+GG+ALD+ GVPLP+ETL  A+ SDAVLLGAIGGYKWD NEKHL
Sbjct: 62  LAGSLEGIEFNFQEMPMGGSALDMAGVPLPDETLLAAKKSDAVLLGAIGGYKWDKNEKHL 121

Query: 178 KPETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           KPETGLLQLREGL+VFANLRPA+VLPQLVDASTLKKEVAEGVD+MVVRELTGGIYFGKP
Sbjct: 122 KPETGLLQLREGLEVFANLRPATVLPQLVDASTLKKEVAEGVDVMVVRELTGGIYFGKP 180


>sp|P29102.1|LEU3_BRANA RecName: Full=3-isopropylmalate dehydrogenase, chloroplastic;
           Short=3-IPM-DH; Short=IMDH; AltName: Full=Beta-IPM
           dehydrogenase; Flags: Precursor gi|17827|emb|CAA42596.1|
           3-isopropylmalate dehydrogenase [Brassica napus]
          Length = 406

 Score =  206 bits (523), Expect = 2e-51
 Identities = 102/118 (86%), Positives = 108/118 (91%)
 Frame = -2

Query: 355 AASFHGVEFGFKEMPVGGAALDLTGVPLPEETLSQARNSDAVLLGAIGGYKWDNNEKHLK 176
           A S  G+EF F+EMPVGGAALDL GVPLPEET+S A+ SDAVLLGAIGGYKWD NEKHLK
Sbjct: 69  AGSLEGLEFSFQEMPVGGAALDLVGVPLPEETVSAAKESDAVLLGAIGGYKWDKNEKHLK 128

Query: 175 PETGLLQLREGLKVFANLRPASVLPQLVDASTLKKEVAEGVDLMVVRELTGGIYFGKP 2
           PETGLLQLR GLKVFANLRPA+VLPQLVDASTLK+EVAEGVDLMVVRELTGGIYFG P
Sbjct: 129 PETGLLQLRAGLKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGVP 186


Top