BLASTX nr result

ID: Cnidium21_contig00006560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006560
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569038.1| PREDICTED: ribosome biogenesis regulatory pr...    60   2e-07
ref|XP_002448802.1| hypothetical protein SORBIDRAFT_06g033550 [S...    58   7e-07
emb|CBI40495.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory pr...    57   1e-06
gb|AFW80206.1| hypothetical protein ZEAMMB73_260157 [Zea mays]         57   2e-06

>ref|XP_003569038.1| PREDICTED: ribosome biogenesis regulatory protein homolog
           [Brachypodium distachyon]
          Length = 332

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = -1

Query: 229 EPG*DPFAKRCTEKKQQVEKPEKNRSHNLKDATKVGALP 113
           EPG DPFAKR  EKKQ+VEK EKNR  NLK+A KVGALP
Sbjct: 150 EPGVDPFAKRRDEKKQRVEKQEKNRLGNLKNAAKVGALP 188


>ref|XP_002448802.1| hypothetical protein SORBIDRAFT_06g033550 [Sorghum bicolor]
           gi|241939985|gb|EES13130.1| hypothetical protein
           SORBIDRAFT_06g033550 [Sorghum bicolor]
          Length = 314

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = -1

Query: 229 EPG*DPFAKRCTEKKQQVEKPEKNRSHNLKDATKVGALPRFNT 101
           EPG DPFA+R  EKK++VEK EKN+  NLK A K+GALPR ++
Sbjct: 172 EPGVDPFAQRRDEKKKRVEKQEKNKLENLKKAAKIGALPRLSS 214


>emb|CBI40495.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = -1

Query: 229 EPG*DPFAKRCTEKKQQVEKPEKNRSHNLKDATKVGALP 113
           EPG DPF KR  EKK++VEK EKNR  NLK A KVGALP
Sbjct: 140 EPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALP 178


>ref|XP_002281065.1| PREDICTED: ribosome biogenesis regulatory protein homolog [Vitis
           vinifera]
          Length = 331

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = -1

Query: 229 EPG*DPFAKRCTEKKQQVEKPEKNRSHNLKDATKVGALP 113
           EPG DPF KR  EKK++VEK EKNR  NLK A KVGALP
Sbjct: 143 EPGEDPFVKRQAEKKKRVEKHEKNRLQNLKQAAKVGALP 181


>gb|AFW80206.1| hypothetical protein ZEAMMB73_260157 [Zea mays]
          Length = 326

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -1

Query: 229 EPG*DPFAKRCTEKKQQVEKPEKNRSHNLKDATKVGALP 113
           EPG DPFA+R  EKK++VEK EKNR  NLK A KVGALP
Sbjct: 146 EPGVDPFAQRRDEKKKRVEKQEKNRLDNLKKAAKVGALP 184


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