BLASTX nr result
ID: Cnidium21_contig00006557
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00006557 (505 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ... 204 6e-51 ref|XP_002510949.1| protein binding protein, putative [Ricinus c... 198 4e-49 ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medi... 188 4e-46 ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|2... 184 6e-45 ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-... 182 3e-44 >ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera] gi|296084203|emb|CBI24591.3| unnamed protein product [Vitis vinifera] Length = 587 Score = 204 bits (519), Expect = 6e-51 Identities = 112/176 (63%), Positives = 127/176 (72%), Gaps = 9/176 (5%) Frame = -3 Query: 503 RAREVSSDEQLARQISSRLDRLPPAPN-LPAGVSPDPTVNPLDGGEWRGGGLDSTWL--- 336 R EVSSDEQLARQISS LDR PA + LPAGV P+ T + L+ WR GLD +WL Sbjct: 395 RTGEVSSDEQLARQISSGLDRPGPAAHALPAGVFPNQTHDALEISAWREAGLDPSWLHTW 454 Query: 335 ---GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXX 171 G DGAGPS +RSVGLGRVQMMMRHLA+VGETYAQTALED AW+LWP N Sbjct: 455 PNQGLDGAGPSTAIRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPMNPSQAAASG 514 Query: 170 XXXXXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3 +VRY G GG H+RT SR+ N+NLA+ILAMAETVREVLPH+PDE+IFQD Sbjct: 515 LPIPPAAAVRYPGGNGGLHMRTASRSANDNLANILAMAETVREVLPHIPDEIIFQD 570 >ref|XP_002510949.1| protein binding protein, putative [Ricinus communis] gi|223550064|gb|EEF51551.1| protein binding protein, putative [Ricinus communis] Length = 585 Score = 198 bits (503), Expect = 4e-49 Identities = 105/173 (60%), Positives = 124/173 (71%), Gaps = 8/173 (4%) Frame = -3 Query: 497 REVSSDEQLARQISSRLDRLPPAPNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------ 336 R+VS+DEQLARQIS LD+ AP LPAGV P+ N ++G WR GLDS+WL Sbjct: 397 RDVSADEQLARQISEGLDQ-QNAPTLPAGVFPNQMRNSIEGSPWRSAGLDSSWLHTWQGQ 455 Query: 335 GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXX 162 G DGAGPS MRSVGLGRVQMMMRHLA+VGETYAQTALED+AW+LWP N Sbjct: 456 GVDGAGPSTAMRSVGLGRVQMMMRHLASVGETYAQTALEDSAWSLWPMNPPQGVASGSLV 515 Query: 161 XXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3 R +G GG H+R+ SR+ N+N+A++LAMAETVREVLPH+PDELI QD Sbjct: 516 PPATGGRSAGGTGGLHMRSPSRSANDNVANLLAMAETVREVLPHIPDELILQD 568 >ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula] gi|355487192|gb|AES68395.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula] Length = 589 Score = 188 bits (477), Expect = 4e-46 Identities = 101/174 (58%), Positives = 122/174 (70%), Gaps = 11/174 (6%) Frame = -3 Query: 491 VSSDEQLARQISSRLDRLPPAP-NLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------G 333 +SSDEQLARQ+S+ DR A N+PAG+ P+PT+N +G WR GLDS WL G Sbjct: 399 ISSDEQLARQMSAGFDRQNSARHNMPAGLFPNPTLNNAEGVPWRSAGLDSGWLHSWPNQG 458 Query: 332 FDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXXX 159 DGAGPS +R+VGLGRVQMMMRHLA+VGETYAQT +D +WNLWP N Sbjct: 459 VDGAGPSTAIRTVGLGRVQMMMRHLASVGETYAQTTFDDASWNLWPINPSQTSASGPSQP 518 Query: 158 XXXS--VRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3 S VR G GG H+RT SR+ N+NLA++LAMAETVREVLPH+PD++IFQD Sbjct: 519 TAPSPGVRLPGGNGGLHIRTASRSANDNLANVLAMAETVREVLPHIPDDIIFQD 572 >ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|222871161|gb|EEF08292.1| predicted protein [Populus trichocarpa] Length = 571 Score = 184 bits (467), Expect = 6e-45 Identities = 102/173 (58%), Positives = 114/173 (65%), Gaps = 9/173 (5%) Frame = -3 Query: 494 EVSSDEQLARQISSRLDRL-PPAPNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------ 336 E +DEQLA QI+ DR P L AGV P+ N ++G WR GLDS+WL Sbjct: 382 EALTDEQLAHQINEGRDRQNTPGHVLSAGVFPNQIRNSMEGSPWRSAGLDSSWLPTWPSQ 441 Query: 335 GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXX 162 G DGAGPS MRSVGLGRVQMMMRHLA+VGETYAQTALED AW+LWP N Sbjct: 442 GGDGAGPSTAMRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPTNPSHATPSTSFI 501 Query: 161 XXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3 R G GG HV TTSR N+N+A+ILAMAETVREVLPH+PDELI QD Sbjct: 502 PPAAGGRRPGGTGGLHVSTTSRTTNDNIANILAMAETVREVLPHIPDELILQD 554 >ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Cucumis sativus] Length = 586 Score = 182 bits (461), Expect = 3e-44 Identities = 101/176 (57%), Positives = 120/176 (68%), Gaps = 9/176 (5%) Frame = -3 Query: 503 RAREVSSDEQLARQISSRLDRLPPA-PNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL--- 336 RA E SDEQLARQIS+ L+R P LPAG+ P+ T NP++G WR LD +WL Sbjct: 395 RAGETFSDEQLARQISAGLNRQNATIPTLPAGIFPNQTQNPVEGSPWRSTSLDPSWLHDW 454 Query: 335 ---GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXX 171 DGAGPS RSVGL RVQMMMRHLA+VGETYAQT++ED+AW+LWP N Sbjct: 455 ASQSMDGAGPSNAARSVGLSRVQMMMRHLASVGETYAQTSIEDSAWSLWPLNSSQVVAGG 514 Query: 170 XXXXXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3 R+ G+ GG ++ SRA N+NLA+I+AMAETVREVLPHVPDELIFQD Sbjct: 515 SQVPRNVVGRHPGSMGGLNM-NVSRASNDNLANIIAMAETVREVLPHVPDELIFQD 569