BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006557
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 ...   204   6e-51
ref|XP_002510949.1| protein binding protein, putative [Ricinus c...   198   4e-49
ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medi...   188   4e-46
ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-...   182   3e-44

>ref|XP_002266334.1| PREDICTED: E3 ubiquitin protein ligase RIN2 [Vitis vinifera]
           gi|296084203|emb|CBI24591.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  204 bits (519), Expect = 6e-51
 Identities = 112/176 (63%), Positives = 127/176 (72%), Gaps = 9/176 (5%)
 Frame = -3

Query: 503 RAREVSSDEQLARQISSRLDRLPPAPN-LPAGVSPDPTVNPLDGGEWRGGGLDSTWL--- 336
           R  EVSSDEQLARQISS LDR  PA + LPAGV P+ T + L+   WR  GLD +WL   
Sbjct: 395 RTGEVSSDEQLARQISSGLDRPGPAAHALPAGVFPNQTHDALEISAWREAGLDPSWLHTW 454

Query: 335 ---GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXX 171
              G DGAGPS  +RSVGLGRVQMMMRHLA+VGETYAQTALED AW+LWP N        
Sbjct: 455 PNQGLDGAGPSTAIRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPMNPSQAAASG 514

Query: 170 XXXXXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3
                  +VRY G  GG H+RT SR+ N+NLA+ILAMAETVREVLPH+PDE+IFQD
Sbjct: 515 LPIPPAAAVRYPGGNGGLHMRTASRSANDNLANILAMAETVREVLPHIPDEIIFQD 570


>ref|XP_002510949.1| protein binding protein, putative [Ricinus communis]
           gi|223550064|gb|EEF51551.1| protein binding protein,
           putative [Ricinus communis]
          Length = 585

 Score =  198 bits (503), Expect = 4e-49
 Identities = 105/173 (60%), Positives = 124/173 (71%), Gaps = 8/173 (4%)
 Frame = -3

Query: 497 REVSSDEQLARQISSRLDRLPPAPNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------ 336
           R+VS+DEQLARQIS  LD+   AP LPAGV P+   N ++G  WR  GLDS+WL      
Sbjct: 397 RDVSADEQLARQISEGLDQ-QNAPTLPAGVFPNQMRNSIEGSPWRSAGLDSSWLHTWQGQ 455

Query: 335 GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXX 162
           G DGAGPS  MRSVGLGRVQMMMRHLA+VGETYAQTALED+AW+LWP N           
Sbjct: 456 GVDGAGPSTAMRSVGLGRVQMMMRHLASVGETYAQTALEDSAWSLWPMNPPQGVASGSLV 515

Query: 161 XXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3
                 R +G  GG H+R+ SR+ N+N+A++LAMAETVREVLPH+PDELI QD
Sbjct: 516 PPATGGRSAGGTGGLHMRSPSRSANDNVANLLAMAETVREVLPHIPDELILQD 568


>ref|XP_003598144.1| E3 ubiquitin-protein ligase synoviolin [Medicago truncatula]
           gi|355487192|gb|AES68395.1| E3 ubiquitin-protein ligase
           synoviolin [Medicago truncatula]
          Length = 589

 Score =  188 bits (477), Expect = 4e-46
 Identities = 101/174 (58%), Positives = 122/174 (70%), Gaps = 11/174 (6%)
 Frame = -3

Query: 491 VSSDEQLARQISSRLDRLPPAP-NLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------G 333
           +SSDEQLARQ+S+  DR   A  N+PAG+ P+PT+N  +G  WR  GLDS WL      G
Sbjct: 399 ISSDEQLARQMSAGFDRQNSARHNMPAGLFPNPTLNNAEGVPWRSAGLDSGWLHSWPNQG 458

Query: 332 FDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXXX 159
            DGAGPS  +R+VGLGRVQMMMRHLA+VGETYAQT  +D +WNLWP N            
Sbjct: 459 VDGAGPSTAIRTVGLGRVQMMMRHLASVGETYAQTTFDDASWNLWPINPSQTSASGPSQP 518

Query: 158 XXXS--VRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3
              S  VR  G  GG H+RT SR+ N+NLA++LAMAETVREVLPH+PD++IFQD
Sbjct: 519 TAPSPGVRLPGGNGGLHIRTASRSANDNLANVLAMAETVREVLPHIPDDIIFQD 572


>ref|XP_002329924.1| predicted protein [Populus trichocarpa] gi|222871161|gb|EEF08292.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  184 bits (467), Expect = 6e-45
 Identities = 102/173 (58%), Positives = 114/173 (65%), Gaps = 9/173 (5%)
 Frame = -3

Query: 494 EVSSDEQLARQISSRLDRL-PPAPNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL------ 336
           E  +DEQLA QI+   DR   P   L AGV P+   N ++G  WR  GLDS+WL      
Sbjct: 382 EALTDEQLAHQINEGRDRQNTPGHVLSAGVFPNQIRNSMEGSPWRSAGLDSSWLPTWPSQ 441

Query: 335 GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXXXXX 162
           G DGAGPS  MRSVGLGRVQMMMRHLA+VGETYAQTALED AW+LWP N           
Sbjct: 442 GGDGAGPSTAMRSVGLGRVQMMMRHLASVGETYAQTALEDAAWSLWPTNPSHATPSTSFI 501

Query: 161 XXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3
                 R  G  GG HV TTSR  N+N+A+ILAMAETVREVLPH+PDELI QD
Sbjct: 502 PPAAGGRRPGGTGGLHVSTTSRTTNDNIANILAMAETVREVLPHIPDELILQD 554


>ref|XP_004140081.1| PREDICTED: E3 ubiquitin protein ligase RIN2-like [Cucumis sativus]
          Length = 586

 Score =  182 bits (461), Expect = 3e-44
 Identities = 101/176 (57%), Positives = 120/176 (68%), Gaps = 9/176 (5%)
 Frame = -3

Query: 503 RAREVSSDEQLARQISSRLDRLPPA-PNLPAGVSPDPTVNPLDGGEWRGGGLDSTWL--- 336
           RA E  SDEQLARQIS+ L+R     P LPAG+ P+ T NP++G  WR   LD +WL   
Sbjct: 395 RAGETFSDEQLARQISAGLNRQNATIPTLPAGIFPNQTQNPVEGSPWRSTSLDPSWLHDW 454

Query: 335 ---GFDGAGPS--MRSVGLGRVQMMMRHLAAVGETYAQTALEDNAWNLWPENXXXXXXXX 171
                DGAGPS   RSVGL RVQMMMRHLA+VGETYAQT++ED+AW+LWP N        
Sbjct: 455 ASQSMDGAGPSNAARSVGLSRVQMMMRHLASVGETYAQTSIEDSAWSLWPLNSSQVVAGG 514

Query: 170 XXXXXXXSVRYSGNAGGAHVRTTSRAVNENLASILAMAETVREVLPHVPDELIFQD 3
                    R+ G+ GG ++   SRA N+NLA+I+AMAETVREVLPHVPDELIFQD
Sbjct: 515 SQVPRNVVGRHPGSMGGLNM-NVSRASNDNLANIIAMAETVREVLPHVPDELIFQD 569