BLASTX nr result

ID: Cnidium21_contig00006505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006505
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...   409   e-112
ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|2...   398   e-109
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...   395   e-107
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...   391   e-106
gb|AER26533.1| eukaryotic translation initiation factor 3G [Cari...   389   e-106

>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score =  409 bits (1051), Expect = e-112
 Identities = 205/269 (76%), Positives = 228/269 (84%), Gaps = 1/269 (0%)
 Frame = -2

Query: 806 NKVRWGXXXXXXXXXDYAYLLPPRQVIGPDHNGVKKVIEHKFNDEGNKVKIITTSRVRKL 627
           +K+RWG            +LLPP+QVIGPD NG+KKVIE+KFND+GNK+KI TT+RVRKL
Sbjct: 10  SKLRWGELDEDDGEDL-DFLLPPKQVIGPDDNGIKKVIEYKFNDDGNKIKITTTTRVRKL 68

Query: 626 ANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKGDEAKASGDAL 447
           A ARLSKRAVERR+WPKFGDAVHEDVG+RLTMVSTEEILLERPRAPG+K DEAK +GD L
Sbjct: 69  AKARLSKRAVERRNWPKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKADEAKMAGDNL 128

Query: 446 SQIGKAGAVLMVCRTCGKKGDHWSARCPYKDLAQPSETFSEQ-XXXXXXXXXXXXXXXAY 270
           +Q+GK GAVLMVCRTCGKKGDHW++RCPYKDLAQP ETF ++                AY
Sbjct: 129 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPAATETAMAASGATKGAY 188

Query: 269 VPPSLRPGAERTTGSDMRRRTEENSVRVTNLSEDTREPDLLELFRTFGPVTRTYVAIDQK 90
           VPPS+R GAERTTGSDMRRR EENSVRVTNLSEDTREPDLLELFRTFG V+R YVAIDQK
Sbjct: 189 VPPSMRAGAERTTGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGHVSRVYVAIDQK 248

Query: 89  TGMSRGFGFVNFVSREDAERAINKLNGYG 3
           TG+SRGFGFVNFVS+EDAERAINKLNGYG
Sbjct: 249 TGVSRGFGFVNFVSKEDAERAINKLNGYG 277


>ref|XP_002315204.1| predicted protein [Populus trichocarpa] gi|222864244|gb|EEF01375.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  398 bits (1023), Expect = e-109
 Identities = 200/268 (74%), Positives = 223/268 (83%), Gaps = 1/268 (0%)
 Frame = -2

Query: 803 KVRWGXXXXXXXXXDYAYLLPPRQVIGPDHNGVKKVIEHKFNDEGNKVKIITTSRVRKLA 624
           K+RWG            +LLPP+QVIGPD NG+KKVIE+KFND+GNKVKI TT+RVRKLA
Sbjct: 12  KMRWGELDEEDGEDL-DFLLPPKQVIGPDENGIKKVIEYKFNDDGNKVKITTTTRVRKLA 70

Query: 623 NARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKGDEAKASGDALS 444
            ARLSKRA+ERR+W KFGDA+HEDVG+RLTMVSTEEILLERPRA G+K DE K +GD L+
Sbjct: 71  KARLSKRALERRNWSKFGDAIHEDVGSRLTMVSTEEILLERPRAHGAKADETKIAGDNLA 130

Query: 443 QIGKAGAVLMVCRTCGKKGDHWSARCPYKDLAQPSETFSEQ-XXXXXXXXXXXXXXXAYV 267
           Q+GK GAVLMVCRTCGKKGDHW++RCPYKDLAQP ETF ++                AYV
Sbjct: 131 QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAQPPETFIDKPPATETAMAATGATKGAYV 190

Query: 266 PPSLRPGAERTTGSDMRRRTEENSVRVTNLSEDTREPDLLELFRTFGPVTRTYVAIDQKT 87
           PPS+R GAERT GSDMRRR EENSVRVTNLSEDTREPDLLELFRTFG V+R YVAIDQKT
Sbjct: 191 PPSMRAGAERTVGSDMRRRNEENSVRVTNLSEDTREPDLLELFRTFGQVSRVYVAIDQKT 250

Query: 86  GMSRGFGFVNFVSREDAERAINKLNGYG 3
           G+SRGFGFVNFVS+EDAERAINKLNGYG
Sbjct: 251 GVSRGFGFVNFVSKEDAERAINKLNGYG 278


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score =  395 bits (1014), Expect = e-107
 Identities = 197/269 (73%), Positives = 224/269 (83%), Gaps = 1/269 (0%)
 Frame = -2

Query: 806 NKVRWGXXXXXXXXXDYAYLLPPRQVIGPDHNGVKKVIEHKFNDEGNKVKIITTSRVRKL 627
           +K+RWG            +LLPPRQVIGPD NG+KKVIE+KFND+GNKVKI TT+R+RKL
Sbjct: 14  SKLRWGELEEDDGEDL-DFLLPPRQVIGPDDNGIKKVIEYKFNDDGNKVKITTTTRIRKL 72

Query: 626 ANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKGDEAKASGDAL 447
           A ARLSKRA+ERRSW KFGDAVHEDVG+RLTMVSTEEILLERPRAPGSK +E+K +GD+L
Sbjct: 73  AKARLSKRAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEESKVAGDSL 132

Query: 446 SQIGKAGAVLMVCRTCGKKGDHWSARCPYKDLAQPSETFSEQ-XXXXXXXXXXXXXXXAY 270
           +Q+GK GAVLMVCRTCGKKGDHW++RCPYKDLA PSE F ++                 Y
Sbjct: 133 AQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFIDKPAASEGTATASGPSKGTY 192

Query: 269 VPPSLRPGAERTTGSDMRRRTEENSVRVTNLSEDTREPDLLELFRTFGPVTRTYVAIDQK 90
           VPP +R GAER TG++MRRR EENSVRVTNLSEDTREPDL ELFRTFGPV+R YVA+DQK
Sbjct: 193 VPPGMRAGAER-TGTEMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAVDQK 251

Query: 89  TGMSRGFGFVNFVSREDAERAINKLNGYG 3
           TGMSRGFGFVNFV++EDAERAINKLNGYG
Sbjct: 252 TGMSRGFGFVNFVNKEDAERAINKLNGYG 280


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score =  391 bits (1004), Expect = e-106
 Identities = 197/268 (73%), Positives = 222/268 (82%), Gaps = 1/268 (0%)
 Frame = -2

Query: 803 KVRWGXXXXXXXXXDYAYLLPPRQVIGPDHNGVKKVIEHKFNDEGNKVKIITTSRVRKLA 624
           K+RWG            +LLPPRQVIGP+ NG+KKVIE+KFN++GNKVKI TT+RVRKLA
Sbjct: 20  KIRWGELDEDDGEDL-DFLLPPRQVIGPEENGIKKVIEYKFNEDGNKVKITTTTRVRKLA 78

Query: 623 NARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKGDEAKASGDALS 444
            ARLSKRAVERRSW KFGDAVHEDVG+RLTMVSTEEILLERPRAPG+K +E K +GD+L+
Sbjct: 79  KARLSKRAVERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGTKAEETKIAGDSLA 138

Query: 443 QIGKAGAVLMVCRTCGKKGDHWSARCPYKDLAQPSETFSEQ-XXXXXXXXXXXXXXXAYV 267
           Q+GK GAVLMVCRTCGKKGDHW++RCPYKDLA  ++ F ++                AYV
Sbjct: 139 QLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAAQTDAFVDKPPAAETTVATTGTGKAAYV 198

Query: 266 PPSLRPGAERTTGSDMRRRTEENSVRVTNLSEDTREPDLLELFRTFGPVTRTYVAIDQKT 87
           PP +RPGAER  GSDMRRR EENSVRVTNLSEDTREPDL ELFRTFGPV+R YVAIDQKT
Sbjct: 199 PPGMRPGAER-VGSDMRRRNEENSVRVTNLSEDTREPDLHELFRTFGPVSRVYVAIDQKT 257

Query: 86  GMSRGFGFVNFVSREDAERAINKLNGYG 3
           GMSRGFGFVNFV++EDAERAINKLNGYG
Sbjct: 258 GMSRGFGFVNFVNKEDAERAINKLNGYG 285


>gb|AER26533.1| eukaryotic translation initiation factor 3G [Carica papaya]
          Length = 297

 Score =  389 bits (999), Expect = e-106
 Identities = 192/269 (71%), Positives = 222/269 (82%), Gaps = 1/269 (0%)
 Frame = -2

Query: 806 NKVRWGXXXXXXXXXDYAYLLPPRQVIGPDHNGVKKVIEHKFNDEGNKVKIITTSRVRKL 627
           +K+RWG            +LLPP+QV GPD NG+K+VIE+KFN++GN+VKI TT+RVRKL
Sbjct: 14  SKLRWGELDEDDGEDL-DFLLPPKQVHGPDENGIKRVIEYKFNEDGNRVKITTTTRVRKL 72

Query: 626 ANARLSKRAVERRSWPKFGDAVHEDVGARLTMVSTEEILLERPRAPGSKGDEAKASGDAL 447
           A AR+SKRA+ERR W KFGDAVHEDVG+RLTMVSTEEILLERPRAPGSK +E K +GD+L
Sbjct: 73  AKARVSKRAMERRGWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDSL 132

Query: 446 SQIGKAGAVLMVCRTCGKKGDHWSARCPYKDLAQPSETFSEQ-XXXXXXXXXXXXXXXAY 270
           +Q+GK GA+LMVCRTCGKKGDHW++RCPYKDLA  +E F ++                 Y
Sbjct: 133 AQLGKGGAILMVCRTCGKKGDHWTSRCPYKDLAPQTEAFVDKPAASETSAAAAGSGKSTY 192

Query: 269 VPPSLRPGAERTTGSDMRRRTEENSVRVTNLSEDTREPDLLELFRTFGPVTRTYVAIDQK 90
           VPPS+R GAERT GSDMRRR +ENSVRVTNLSEDTREPDLLELFRTFGPVTR YVAIDQK
Sbjct: 193 VPPSMRAGAERTGGSDMRRRNDENSVRVTNLSEDTREPDLLELFRTFGPVTRVYVAIDQK 252

Query: 89  TGMSRGFGFVNFVSREDAERAINKLNGYG 3
           TG+SRGFGFVNFV+REDA+RAINKLNGYG
Sbjct: 253 TGVSRGFGFVNFVNREDAQRAINKLNGYG 281


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