BLASTX nr result

ID: Cnidium21_contig00006493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006493
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX67041.1| RNA recognition motif containing protein [Solanum...   147   1e-33
gb|AAT40482.1| hypothetical protein [Solanum demissum]                147   1e-33
emb|CBI31989.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   141   5e-32
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   140   1e-31

>gb|AFX67041.1| RNA recognition motif containing protein [Solanum tuberosum]
          Length = 245

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/93 (73%), Positives = 78/93 (83%)
 Frame = -1

Query: 293 YTVEVTSLSPVATEKDVQDFFAFCGKIEHVEIIRAGEYASTAYVSFRYAHALETAVLLSG 114
           YT EVT LSP ATEKDVQ+FF FCG IEHVEI+RAGE+ASTAYV+FR  HALETAVLLSG
Sbjct: 6   YTAEVTGLSPTATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSG 65

Query: 113 ATILDQPVCITNWGQSEDEFNIWNRPSWKLEDE 15
           A ILDQ VCIT+WG  +DEF+ WN  SWK +++
Sbjct: 66  AAILDQRVCITSWGHYQDEFDYWNHSSWKPQED 98


>gb|AAT40482.1| hypothetical protein [Solanum demissum]
          Length = 244

 Score =  147 bits (370), Expect = 1e-33
 Identities = 68/93 (73%), Positives = 78/93 (83%)
 Frame = -1

Query: 293 YTVEVTSLSPVATEKDVQDFFAFCGKIEHVEIIRAGEYASTAYVSFRYAHALETAVLLSG 114
           YT EVT LSP ATEKDVQ+FF FCG IEHVEI+RAGE+ASTAYV+FR  HALETAVLLSG
Sbjct: 6   YTAEVTGLSPAATEKDVQEFFGFCGAIEHVEIVRAGEHASTAYVTFRNPHALETAVLLSG 65

Query: 113 ATILDQPVCITNWGQSEDEFNIWNRPSWKLEDE 15
           A ILDQ VCIT+WG  +DEF+ WN  SWK +++
Sbjct: 66  AAILDQRVCITSWGHYQDEFDYWNHSSWKPQED 98


>emb|CBI31989.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = -1

Query: 308 MDSRLYTVEVTSLSPVATEKDVQDFFAFCGKIEHVEIIR-AGEYASTAYVSFRYAHALET 132
           M +  +T+EVTSLSP  TEKDV DFFAF G IE VE++R A E A TAYV+F+ A+A+ET
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 131 AVLLSGATILDQPVCITNWGQSEDEFNIWNRPSWKLEDESSET 3
           AVLLSGATI+DQ VCIT WG  EDEF++WNRP+WKLEDE+S T
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSST 103


>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
           gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
           isoform 2 [Vitis vinifera]
           gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
           [Vitis vinifera]
          Length = 246

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/103 (67%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = -1

Query: 308 MDSRLYTVEVTSLSPVATEKDVQDFFAFCGKIEHVEIIR-AGEYASTAYVSFRYAHALET 132
           M +  +T+EVTSLSP  TEKDV DFFAF G IE VE++R A E A TAYV+F+ A+A+ET
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 131 AVLLSGATILDQPVCITNWGQSEDEFNIWNRPSWKLEDESSET 3
           AVLLSGATI+DQ VCIT WG  EDEF++WNRP+WKLEDE+S T
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSST 103


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/102 (67%), Positives = 83/102 (81%)
 Frame = -1

Query: 308 MDSRLYTVEVTSLSPVATEKDVQDFFAFCGKIEHVEIIRAGEYASTAYVSFRYAHALETA 129
           M+S  Y VEVT LSP AT+KDV+DFFAF G IE+VEIIR+G+YA TAYV+F+ A+A ETA
Sbjct: 1   MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETA 60

Query: 128 VLLSGATILDQPVCITNWGQSEDEFNIWNRPSWKLEDESSET 3
            LLSGATILDQ VCIT WG  EDEF+ WN+PS+  EDE++ T
Sbjct: 61  CLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETAST 102


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