BLASTX nr result

ID: Cnidium21_contig00006462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006462
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002891938.1| predicted protein [Arabidopsis lyrata subsp....    94   1e-17
ref|XP_002524237.1| Disease resistance protein RPP8, putative [R...    87   2e-15
gb|AAP82811.1| resistance protein RPP8-like protein [Arabidopsis...    87   2e-15
gb|AAP82809.1| resistance protein RPP8-like protein [Arabidopsis...    86   2e-15
gb|AAP82789.1| resistance protein RPP8-like protein [Arabidopsis...    86   2e-15

>ref|XP_002891938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337780|gb|EFH68197.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 918

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 2/105 (1%)
 Frame = +1

Query: 1    LGKSCLEEDPMPVLEKIPTLRDLDLRGSYW--KEMVCSAMGFXXXXXXXXXXXXXXEKWR 174
            L + CLEEDPMP+LEK+  L+++ L+   +  K MVCS  GF              E+W 
Sbjct: 789  LTECCLEEDPMPILEKLFQLKEVHLKYQSFCGKRMVCSGNGFPQLQFLSIFELKEWEEWI 848

Query: 175  VEEGSMPILQQLRIWDCPKLEELPEGLKFLNSLRKLILKQMPSEF 309
            VEEGSMP+L  L IW C KL+ELP+G++++ SL++L +  M +E+
Sbjct: 849  VEEGSMPLLHTLTIWSCGKLKELPDGMRYITSLKELYIGMMQTEW 893


>ref|XP_002524237.1| Disease resistance protein RPP8, putative [Ricinus communis]
            gi|223536514|gb|EEF38161.1| Disease resistance protein
            RPP8, putative [Ricinus communis]
          Length = 857

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1    LGKSCLEEDPMPVLEKIPTLRDLDLRGSY-WKEMVCSAMGFXXXXXXXXXXXXXXEKWRV 177
            L +S L +DPMP+LEK+P LR L L G+Y    MVCSA GF              E+W V
Sbjct: 726  LCRSQLRQDPMPILEKLPNLRFLSLEGTYKGPVMVCSAYGFPQLEVVKLGWLDKLEEWMV 785

Query: 178  EEGSMPILQQLRIWDCPKLEELPEGLKFLNSLRKLILKQMPSEFCNNFR 324
            EEG+MP L+ L I    +L  +PEGLKF+ +L++L ++ MP  F    R
Sbjct: 786  EEGAMPCLRTLDIDSLRELRTIPEGLKFVGTLQELNVRWMPEAFEKRIR 834


>gb|AAP82811.1| resistance protein RPP8-like protein [Arabidopsis thaliana]
          Length = 506

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
 Frame = +1

Query: 16  LEEDPMPVLEKIPTLRDLDLRGSYW--KEMVCSAMGFXXXXXXXXXXXXXXEKWRVEEGS 189
           +EEDPMP+LEK+  L+ + L+   +  + MVCS  GF              E+W VEEGS
Sbjct: 407 MEEDPMPILEKLLHLKSVQLKTKAFIGRRMVCSKGGFTQLCALDISKESELEEWIVEEGS 466

Query: 190 MPILQQLRIWDCPKLEELPEGLKFLNSLRKLILKQMPSEF 309
           MP L+ L I DC KL+ELP+GLK++ SL++L +++M  E+
Sbjct: 467 MPCLRTLTIHDCEKLKELPDGLKYITSLKELKIREMKREW 506


>gb|AAP82809.1| resistance protein RPP8-like protein [Arabidopsis thaliana]
          Length = 502

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = +1

Query: 16  LEEDPMPVLEKIPTLRDLDLRGSYW--KEMVCSAMGFXXXXXXXXXXXXXXEKWRVEEGS 189
           +EEDPMP+LEK+  L+ + L    +  + MVCS  GF              E+W VEEGS
Sbjct: 397 MEEDPMPILEKLLHLKSVQLAVEAFVGRRMVCSKGGFTQLCALDISKESELEEWIVEEGS 456

Query: 190 MPILQQLRIWDCPKLEELPEGLKFLNSLRKLILKQMPSEF 309
           MP L+ L I DC KL+ELP+GLK++ SL++L +K+M  E+
Sbjct: 457 MPCLRTLTIHDCEKLKELPDGLKYITSLKELKIKEMKREW 496


>gb|AAP82789.1| resistance protein RPP8-like protein [Arabidopsis thaliana]
           gi|32453317|gb|AAP82790.1| resistance protein RPP8-like
           protein [Arabidopsis thaliana]
          Length = 506

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
 Frame = +1

Query: 16  LEEDPMPVLEKIPTLRDLDL--RGSYWKEMVCSAMGFXXXXXXXXXXXXXXEKWRVEEGS 189
           ++EDPMP+LEK+  L+ ++L  +  Y + MVCS  GF              E+W VEEGS
Sbjct: 407 MKEDPMPILEKLLHLKSVELSNKAFYGRRMVCSKGGFPQLCALDISKESELEEWIVEEGS 466

Query: 190 MPILQQLRIWDCPKLEELPEGLKFLNSLRKLILKQMPSEF 309
           MP L+ L I DC KL+ELP+GLK++ SL++L ++ M  E+
Sbjct: 467 MPCLRTLTIHDCEKLKELPDGLKYITSLKELKIEGMKREW 506


Top