BLASTX nr result

ID: Cnidium21_contig00006425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006425
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278123.1| PREDICTED: glucan endo-1,3-beta-glucosidase-...   352   8e-95
gb|AAR06588.1| beta-1,3-glucanase [Vitis riparia]                     347   2e-93
emb|CAA09765.1| beta-1,3-glucanase [Cichorium intybus x Cichoriu...   339   7e-91
gb|AAL30420.1|AF434173_1 glucanase [Sambucus nigra]                   337   2e-90
ref|XP_002299791.1| predicted protein [Populus trichocarpa] gi|1...   333   3e-89

>ref|XP_002278123.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Vitis vinifera]
           gi|378405175|sp|A7PQW3.2|E13B_VITVI RecName: Full=Glucan
           endo-1,3-beta-glucosidase; AltName:
           Full=(1->3)-beta-glucan endohydrolase;
           Short=(1->3)-beta-glucanase; AltName:
           Full=Beta-1,3-endoglucanase; Flags: Precursor
          Length = 344

 Score =  352 bits (903), Expect = 8e-95
 Identities = 182/293 (62%), Positives = 220/293 (75%), Gaps = 3/293 (1%)
 Frame = +2

Query: 89  IFLFLGIFMLAIKTSGAQSVGVCYGRNGDNLPNEQATINLFKANGIGKMRLYDPVQPAYQ 268
           + L LG  +++  T GAQS+GVCYGRNG+NLP+    INL+K+NGIG MR+YDP     Q
Sbjct: 11  VVLLLGFVIMSTITIGAQSIGVCYGRNGNNLPSASQVINLYKSNGIGSMRIYDPNSDTLQ 70

Query: 269 ALRGSNIEVILDVPNTQLESL-QDPAAARTWVRDNIQNNMPGVNFRYIAVGNEVDPNEGT 445
           ALRGS+IE+ILDVPNT L+SL  D +AA TWV++N+ N    V FRYIAVGNEV P    
Sbjct: 71  ALRGSDIELILDVPNTDLQSLASDASAAATWVQNNVVNYASEVKFRYIAVGNEVLPTGSN 130

Query: 446 SRYVNLVLPAMRNVHDAIVAAGLQNQIKVSTATYSG-LTSGFPPSEGSFKDNTKGFIEPI 622
           ++Y   VLPAM+NV  AI +AGLQ+QIKVSTAT+S  L   +PPSEGSF D+   FI PI
Sbjct: 131 AQYAQYVLPAMKNVQSAITSAGLQDQIKVSTATFSAVLGKSYPPSEGSFSDDVSSFINPI 190

Query: 623 IRFLAQNNLPLLANIYPYFSYLGTPQG-NLRYALFTSPDVVVFDGNRQYWNLFDALLDTM 799
           I FLA+N  PLLANIYPYFSY G  Q   L YALFT+  VVV DG+ QY NLFDALLD +
Sbjct: 191 ISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTASGVVVQDGSYQYQNLFDALLDAL 250

Query: 800 YSAVEKSGGSNIEIVVSESGWPSAGDREASVQNAGTYYRNLINHVKRNGTPKR 958
           Y+A+EK+GGSN++IVVSESGWPS G   A+V NA TYY+NLINHVK  GTP++
Sbjct: 251 YAALEKAGGSNLKIVVSESGWPSEGGTAATVDNARTYYKNLINHVK-GGTPRK 302


>gb|AAR06588.1| beta-1,3-glucanase [Vitis riparia]
          Length = 344

 Score =  347 bits (890), Expect = 2e-93
 Identities = 179/293 (61%), Positives = 215/293 (73%), Gaps = 3/293 (1%)
 Frame = +2

Query: 89  IFLFLGIFMLAIKTSGAQSVGVCYGRNGDNLPNEQATINLFKANGIGKMRLYDPVQPAYQ 268
           + L LG  +++  T GAQS+GVCYG NGDNLP+    INL+K+NGIG MR+YDP     Q
Sbjct: 11  VVLLLGFVIMSTLTIGAQSIGVCYGTNGDNLPSASQVINLYKSNGIGSMRIYDPNSDTLQ 70

Query: 269 ALRGSNIEVILDVPNTQLESL-QDPAAARTWVRDNIQNNMPGVNFRYIAVGNEVDPNEGT 445
           AL+GS IE+ILDVPNT L+SL  D + A TWV++N+ N    V FRYIA GNEV P    
Sbjct: 71  ALKGSGIELILDVPNTSLQSLASDASDASTWVQNNVVNYASDVKFRYIAAGNEVLPTGSN 130

Query: 446 SRYVNLVLPAMRNVHDAIVAAGLQNQIKVSTATYSG-LTSGFPPSEGSFKDNTKGFIEPI 622
           ++Y   VLPAM+NV  AI +AGLQ QIKVSTATYS  L + +PPS GSF  +   FI PI
Sbjct: 131 AQYAQYVLPAMKNVQSAITSAGLQGQIKVSTATYSSVLGTSYPPSAGSFSSDVSSFINPI 190

Query: 623 IRFLAQNNLPLLANIYPYFSYLGTPQG-NLRYALFTSPDVVVFDGNRQYWNLFDALLDTM 799
           I FLA+N  PLLANIYPYFSY G  Q   L YALFTSP+VVV DG+ QY NLFDALLD +
Sbjct: 191 ISFLAENGSPLLANIYPYFSYTGNTQSIQLDYALFTSPEVVVKDGSYQYQNLFDALLDAL 250

Query: 800 YSAVEKSGGSNIEIVVSESGWPSAGDREASVQNAGTYYRNLINHVKRNGTPKR 958
           Y+A+ K+GGSN++IVVSESGWPS G   A+V NA TYY+NLINHVK  GTP++
Sbjct: 251 YAALGKAGGSNLKIVVSESGWPSEGGTAATVDNARTYYKNLINHVK-GGTPRK 302


>emb|CAA09765.1| beta-1,3-glucanase [Cichorium intybus x Cichorium endivia]
          Length = 347

 Score =  339 bits (869), Expect = 7e-91
 Identities = 185/306 (60%), Positives = 220/306 (71%), Gaps = 5/306 (1%)
 Frame = +2

Query: 59  ALSKPSFMQSIFLFLGIFMLAIKTSGAQSVGVCYGRNG--DNLPNEQATINLFKANGIGK 232
           AL  P  +  + L LG+ +       AQ+VGVCYGR     +LP+E+AT+NL++ NGI  
Sbjct: 2   ALHTPGQVAPLLLLLGMVVNFHIFIDAQAVGVCYGRVAVPGSLPSEEATVNLYQQNGITA 61

Query: 233 MRLYDPVQPAYQALRGSNIEVILDVPNTQLESLQDPAAARTWVRDNIQNNMPGVNFRYIA 412
           MR+YDP Q   QAL+G +IE++LDVPN++LESL +P AA TWVR+NIQN  PGVNFRYIA
Sbjct: 62  MRIYDPNQATLQALQGIDIELMLDVPNSELESLNNPVAATTWVRNNIQN-YPGVNFRYIA 120

Query: 413 VGNEVDPNEG-TSRYVNLVLPAMRNVHDAIVAAGLQNQIKVSTATYSGLT-SGFPPSEGS 586
           VGNEVDPN   TS YV LVLPAMRNVH AIV A L NQIKVSTATY+GL  + +PPS+G 
Sbjct: 121 VGNEVDPNNNATSDYVKLVLPAMRNVHQAIVDASLANQIKVSTATYTGLLENSYPPSDGV 180

Query: 587 FKDNTKGFIEPIIRFLAQNNLPLLANIYPYFSYLGTPQGNLRYALFTSPDVVVFDGNRQY 766
           F +N K FIEPII FL QNNLP+LANIYPYF+  G+ Q NL YAL      VV D    Y
Sbjct: 181 FHENVKAFIEPIIAFLVQNNLPMLANIYPYFAAQGSMQVNLSYALLQPDAPVVNDNGIMY 240

Query: 767 WNLFDALLDTMYSAVEKSGGSNIEIVVSESGWPSAGDREASVQNAGTYYRNLINHVKR-N 943
            NLFDA+LD  Y+A    GG N+EIVVSESGWPS  D  A+V+NAGTYYRNLI HV +  
Sbjct: 241 SNLFDAMLDAHYAAQAPFGGENLEIVVSESGWPSCCDSIATVENAGTYYRNLIGHVTQVG 300

Query: 944 GTPKRP 961
           GT  +P
Sbjct: 301 GTSAKP 306


>gb|AAL30420.1|AF434173_1 glucanase [Sambucus nigra]
          Length = 340

 Score =  337 bits (865), Expect = 2e-90
 Identities = 171/299 (57%), Positives = 222/299 (74%), Gaps = 5/299 (1%)
 Frame = +2

Query: 80  MQSIFLFLGIFMLAIKTSGAQSVGVCYGRNGDNLPNEQATINLFKANGIGKMRLYDPVQP 259
           M +  + +G+ M  ++ +GAQSVGVCYG+ G+NLP+++  +NL+K  GI +MR+YDP +P
Sbjct: 1   MVAALVLIGLLMPTLQIAGAQSVGVCYGQKGNNLPSQRDVVNLYKKYGIRRMRVYDPAEP 60

Query: 260 AYQALRGSNIEVILDVPNTQLESL-QDPAAARTWVRDNIQNNMPGVNFRYIAVGNEVDPN 436
             QALRG +IE+ILDVPN+ L++L  +P+AA TWV++NI+N    V FRYIAVGNEVDP 
Sbjct: 61  ILQALRGKSIEIILDVPNSDLQNLASNPSAAVTWVQNNIRNYSRDVRFRYIAVGNEVDPY 120

Query: 437 EGTSRYVNLVLPAMRNVHDAIVAAGLQNQIKVSTATYSG-LTSGFPPSEGSFKDNTKGFI 613
               +Y++ VLP MRNVHDAIVAAGLQ QIKVSTATY+G L    PPS G ++ N + FI
Sbjct: 121 NENVQYISFVLPTMRNVHDAIVAAGLQGQIKVSTATYTGVLIVTSPPSAGLYRPNVRSFI 180

Query: 614 EPIIRFLAQNNLPLLANIYPYFSYLGTPQGNLRYALFTSPDVVVFDGNR--QYWNLFDAL 787
           +PII FL QNNLPLL N+YP+ +  G     L YALFT+P VVV D +R  +Y NLF A+
Sbjct: 181 DPIINFLVQNNLPLLVNVYPHIAITGNSDIQLPYALFTAPGVVVTDSDRNLEYRNLFVAI 240

Query: 788 LDTMYSAVEKSGGSNIEIVVSESGWPSAGDREASVQNAGTYYRNLINHVK-RNGTPKRP 961
           LD  Y+A+EK+GG N+EIVVSESGWP+ G   A++ NA TY  NLI HVK R+GTP+RP
Sbjct: 241 LDAHYAALEKAGGPNVEIVVSESGWPTQGHPVATIDNAKTYNNNLIRHVKGRSGTPRRP 299


>ref|XP_002299791.1| predicted protein [Populus trichocarpa] gi|118486989|gb|ABK95326.1|
           unknown [Populus trichocarpa]
           gi|222847049|gb|EEE84596.1| predicted protein [Populus
           trichocarpa]
          Length = 338

 Score =  333 bits (855), Expect = 3e-89
 Identities = 169/293 (57%), Positives = 217/293 (74%), Gaps = 2/293 (0%)
 Frame = +2

Query: 86  SIFLFLGIFMLAIKTSGAQSVGVCYGRNGDNLPNEQATINLFKANGIGKMRLYDPVQPAY 265
           +I L  G+ +  +  S AQS+GVCYG+NG+NLP++Q  ++LF+ N IG+MR+YDP +   
Sbjct: 8   TILLLFGLMISRLTLSDAQSIGVCYGKNGNNLPSDQEVVSLFQTNVIGRMRIYDPNRDTL 67

Query: 266 QALRGSNIEVILDVPNTQLESLQDPAAARTWVRDNIQNNMPGVNFRYIAVGNEVDPNEGT 445
           +ALRGSNIEV+L VPN +L+SL D +AA TWV+DN+      V FRYIAVGNEV P +  
Sbjct: 68  EALRGSNIEVVLGVPNDKLQSLTDASAATTWVQDNVVAYSSNVKFRYIAVGNEVHPGDAN 127

Query: 446 SRYVNLVLPAMRNVHDAIVAAGLQNQIKVSTATYSGLT-SGFPPSEGSFKDNTKGFIEPI 622
           ++    VLPAM+N+H+AI +A LQ+QIKVSTA  + L  S +PPS+GSF D+   +I PI
Sbjct: 128 AQ---SVLPAMQNIHNAIASANLQDQIKVSTAIDTTLLGSSYPPSDGSFSDSASSYINPI 184

Query: 623 IRFLAQNNLPLLANIYPYFSYLGTPQG-NLRYALFTSPDVVVFDGNRQYWNLFDALLDTM 799
           I FL  N  PLLAN+YPYFSY G PQ  +L YALFTSP VVV DG   Y NLFDALLD++
Sbjct: 185 INFLRTNGSPLLANVYPYFSYTGNPQSIDLSYALFTSPGVVVQDGQYGYQNLFDALLDSL 244

Query: 800 YSAVEKSGGSNIEIVVSESGWPSAGDREASVQNAGTYYRNLINHVKRNGTPKR 958
           Y+A+EK+G  ++ IVVSESGWPS G   A+  NAGT+YRNLINHVK+ GTP+R
Sbjct: 245 YAALEKAGAPDLNIVVSESGWPSEGGTAATADNAGTFYRNLINHVKQ-GTPRR 296


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