BLASTX nr result

ID: Cnidium21_contig00006412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006412
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|2...    79   9e-23
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    84   2e-21
ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    84   2e-21
ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-21
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    77   3e-21

>ref|XP_002312763.1| predicted protein [Populus trichocarpa] gi|222852583|gb|EEE90130.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 79.3 bits (194), Expect(2) = 9e-23
 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = -1

Query: 493 CGQCGVDARPFLHHIHHHG-LYRRLCTACLLRANSHAFCPTCFTLH-DPRAVARAQGNTI 320
           CG CG + R  LH++ H    YRRLCT CLL+ +   FCP CF+++ +P  + R+     
Sbjct: 11  CGICGAEDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFSVYEEPLPIDRSM---- 66

Query: 319 PCTKCGSISHSVCVGEN-PSKENYICPLCTAQFSPIFGWKSGGSNGE 182
            C KC SISH  C+  N P    +ICP C+   SP F + +  +NG+
Sbjct: 67  -CNKCPSISHKPCIPSNYPHHTPFICPSCS---SPNFSFFNPTTNGD 109



 Score = 52.8 bits (125), Expect(2) = 9e-23
 Identities = 25/45 (55%), Positives = 38/45 (84%)
 Frame = -3

Query: 143 KISYDSMSKAASFAKLEADKKVKEATFTRKRAKEALDHVANVSEK 9
           KI+  SM+KAA+ AK+EA+K+VKEAT+ +KRA+EAL+ +A ++ K
Sbjct: 129 KIAAVSMTKAAAMAKVEAEKRVKEATYAKKRAREALERLAYLAAK 173


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 84.3 bits (207), Expect(2) = 2e-21
 Identities = 37/90 (41%), Positives = 51/90 (56%)
 Frame = -1

Query: 505  TLTNCGQCGVDARPFLHHIHHHGLYRRLCTACLLRANSHAFCPTCFTLHDPRAVARAQGN 326
            T   CG C +  R  LHH+ H G+YRRLCT+C+L+ +   FCP CF  +DP      +  
Sbjct: 768  TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPSPHLRS- 826

Query: 325  TIPCTKCGSISHSVCVGENPSKENYICPLC 236
               C KC SISH  CV  +   ++++CP C
Sbjct: 827  --LCQKCPSISHQHCVASH--SDSFVCPPC 852



 Score = 43.1 bits (100), Expect(2) = 2e-21
 Identities = 20/45 (44%), Positives = 34/45 (75%)
 Frame = -3

Query: 143  KISYDSMSKAASFAKLEADKKVKEATFTRKRAKEALDHVANVSEK 9
            +IS+ +M KAA  ++ E++++VKEA F +KRA+E+L HV + + K
Sbjct: 892  RISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVESNAAK 936


>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 84.3 bits (207), Expect(2) = 2e-21
 Identities = 37/90 (41%), Positives = 51/90 (56%)
 Frame = -1

Query: 505 TLTNCGQCGVDARPFLHHIHHHGLYRRLCTACLLRANSHAFCPTCFTLHDPRAVARAQGN 326
           T   CG C +  R  LHH+ H G+YRRLCT+C+L+ +   FCP CF  +DP      +  
Sbjct: 6   TTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDPPPSPHLRS- 64

Query: 325 TIPCTKCGSISHSVCVGENPSKENYICPLC 236
              C KC SISH  CV  +   ++++CP C
Sbjct: 65  --LCQKCPSISHQHCVASH--SDSFVCPPC 90



 Score = 43.1 bits (100), Expect(2) = 2e-21
 Identities = 20/45 (44%), Positives = 34/45 (75%)
 Frame = -3

Query: 143 KISYDSMSKAASFAKLEADKKVKEATFTRKRAKEALDHVANVSEK 9
           +IS+ +M KAA  ++ E++++VKEA F +KRA+E+L HV + + K
Sbjct: 130 RISFLTMRKAAVASRGESERRVKEAAFAKKRARESLQHVESNAAK 174


>ref|XP_002315467.1| predicted protein [Populus trichocarpa] gi|222864507|gb|EEF01638.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 75.5 bits (184), Expect(2) = 3e-21
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
 Frame = -1

Query: 493 CGQCGVDARPFLHHIHHHG-LYRRLCTACLLRANSHAFCPTCFTLHDPRAVARAQGNTIP 317
           CG CG   R  LH++ H    YRRLCT CLL+ +   FCP CF +++       Q +   
Sbjct: 11  CGICGTQDRYLLHNVRHRTPSYRRLCTNCLLKDHRGLFCPFCFIVYE----EPLQNDRSM 66

Query: 316 CTKCGSISHSVCVGEN-PSKENYICPLCTAQFSPIFGWKSGGSNGE 182
           C KC SI+H  C+  N P    +ICP C+   SP F + +   NG+
Sbjct: 67  CNKCPSIAHKPCIPSNYPHHTPFICPSCS---SPNFSFFNPTRNGD 109



 Score = 51.6 bits (122), Expect(2) = 3e-21
 Identities = 24/45 (53%), Positives = 38/45 (84%)
 Frame = -3

Query: 143 KISYDSMSKAASFAKLEADKKVKEATFTRKRAKEALDHVANVSEK 9
           KI+  SM+KAA+ A++EA+K+VKEAT+ +KRA+EAL+ +A ++ K
Sbjct: 129 KIASISMTKAAALARVEAEKRVKEATYAKKRAREALERLAYLAAK 173


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 77.4 bits (189), Expect(2) = 3e-21
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -1

Query: 493 CGQCGVDARPFLHHIHHHGLYRRLCTACLLRANSHAFCPTCFTLHD-PRAVARAQGNTIP 317
           CG CG + R  LH++ H   YRRLCT C+L+ +   FCP CF ++D    +  A    + 
Sbjct: 7   CGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERVM 66

Query: 316 CTKCGSISHSVCVGENPSKENYICPLCTA 230
           C KC SISH  C+    +   ++CP C++
Sbjct: 67  CLKCPSISHLSCLPPFHNTSPFLCPPCSS 95



 Score = 49.7 bits (117), Expect(2) = 3e-21
 Identities = 24/43 (55%), Positives = 36/43 (83%)
 Frame = -3

Query: 143 KISYDSMSKAASFAKLEADKKVKEATFTRKRAKEALDHVANVS 15
           KI+  SM+KAA+ A+LEA+++VKEAT  +KRA+EAL+ +A +S
Sbjct: 124 KIAAVSMAKAAALARLEAERRVKEATLAKKRAREALERLAFLS 166


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