BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006376
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]   335   1e-89
ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransfe...   332   1e-88
ref|XP_002885434.1| RNA methyltransferase family protein [Arabid...   307   2e-81
ref|NP_188767.2| RNA methyltransferase family protein [Arabidops...   307   3e-81
gb|AAL85018.1| unknown protein [Arabidopsis thaliana]                 307   3e-81

>emb|CAN65004.1| hypothetical protein VITISV_023490 [Vitis vinifera]
          Length = 1255

 Score =  335 bits (858), Expect = 1e-89
 Identities = 166/255 (65%), Positives = 197/255 (77%), Gaps = 2/255 (0%)
 Frame = +1

Query: 163 AAMPSFGLRRLNFSHPWLVNFRXXXXXXXXXXXXXXXXXXFEPTQSNSTTTTLNEDNKPK 342
           A +P++GLRRLN   PW+ NFR                    P   +S  +  +   KPK
Sbjct: 2   ATVPTYGLRRLNSGRPWMQNFRRSSILSSAI-----------PAIQDSEESQFDSP-KPK 49

Query: 343 TTSFYPKRGQTLELECESIAYKGKGVCKVADTGFVLMCDRVLPGERFIGRVTRKRDNYAE 522
           T S++PKRGQTLEL CES+A+KGKG+CKVADTGFV++CDR LPGERF+GRVTRK+ NYAE
Sbjct: 50  TQSYFPKRGQTLELVCESLAFKGKGLCKVADTGFVVLCDRALPGERFVGRVTRKKGNYAE 109

Query: 523 VKKLKTLSPHRDAVEAPCEYASHCGGCKTQNLLYEAQVRAKEQQVRELTVHVGRFSNK-- 696
           V K++T+SPH D V+APCEYAS+CGGCKTQNL YEAQVRAKEQQV+EL +HVG+FS+K  
Sbjct: 110 VTKVETISPHWDIVDAPCEYASNCGGCKTQNLSYEAQVRAKEQQVQELVIHVGKFSDKDP 169

Query: 697 ELESIMKPIVPCDIQFHYRNKMEFSFGPKKWVPIELLEERGSNSNDDYALGLHAPGFFDK 876
           E  SIMKPIVPCDIQFHYRNKMEFSF  +KW+P ELL E+   ++  YALGLHAPGFFDK
Sbjct: 170 EFSSIMKPIVPCDIQFHYRNKMEFSFATQKWLPRELLHEKEDGAS-GYALGLHAPGFFDK 228

Query: 877 VLNVDICLLQSEPAN 921
           VLNV+ CLLQSEPAN
Sbjct: 229 VLNVNKCLLQSEPAN 243


>ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransferase CT0009 [Vitis
           vinifera] gi|297743126|emb|CBI35993.3| unnamed protein
           product [Vitis vinifera]
          Length = 570

 Score =  332 bits (850), Expect = 1e-88
 Identities = 169/276 (61%), Positives = 205/276 (74%), Gaps = 3/276 (1%)
 Frame = +1

Query: 103 PNIYFFLSS*TE-PTAVEMTTAAMPSFGLRRLNFSHPWLVNFRXXXXXXXXXXXXXXXXX 279
           PN++F  +   + P    M T  +P++GLR LN   PW+ NFR                 
Sbjct: 11  PNLHFAATGVQQQPRPPPMAT--VPTYGLRWLNSGRPWMQNFRRSSILSSAI-------- 60

Query: 280 XFEPTQSNSTTTTLNEDNKPKTTSFYPKRGQTLELECESIAYKGKGVCKVADTGFVLMCD 459
              P   +S  +  +   KPKT S++PKRGQTLEL CES+A+KGKG+CKVADTGFV++CD
Sbjct: 61  ---PAIQDSEESQFDSP-KPKTQSYFPKRGQTLELVCESLAFKGKGLCKVADTGFVVLCD 116

Query: 460 RVLPGERFIGRVTRKRDNYAEVKKLKTLSPHRDAVEAPCEYASHCGGCKTQNLLYEAQVR 639
           R LPGERF+GRVTRK+ NYAEV K++T+SPH D V+APCEYAS+CGGCKTQNL YEAQVR
Sbjct: 117 RALPGERFVGRVTRKKGNYAEVTKVETISPHWDIVDAPCEYASNCGGCKTQNLSYEAQVR 176

Query: 640 AKEQQVRELTVHVGRFSNK--ELESIMKPIVPCDIQFHYRNKMEFSFGPKKWVPIELLEE 813
           AKEQQV+EL +HVG+FS+K  E  SIMKPIVPCD+QFHYRNKMEFSF  +KW+P ELL E
Sbjct: 177 AKEQQVQELVIHVGKFSDKDPEFSSIMKPIVPCDVQFHYRNKMEFSFATQKWLPRELLHE 236

Query: 814 RGSNSNDDYALGLHAPGFFDKVLNVDICLLQSEPAN 921
           +   ++  YALGLHAPGFFDKVLNV+ CLLQSEPAN
Sbjct: 237 KEDGAS-GYALGLHAPGFFDKVLNVNKCLLQSEPAN 271


>ref|XP_002885434.1| RNA methyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331274|gb|EFH61693.1| RNA
           methyltransferase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  307 bits (787), Expect = 2e-81
 Identities = 154/259 (59%), Positives = 188/259 (72%), Gaps = 6/259 (2%)
 Frame = +1

Query: 163 AAMPSFGLRRLNFSHPWLVNFRXXXXXXXXXXXXXXXXXXFEPTQSNSTTTTLNEDN--- 333
           A  P  GLR +  +  WL  FR                   E +  N T   LN++N   
Sbjct: 3   ATTPVHGLRYVVPTRSWLQRFRCCSSSLASLSPS-------EFSGGNKTQKKLNDENING 55

Query: 334 -KPKTTSFYPKRGQTLELECESIAYKGKGVCKVADTGFVLMCDRVLPGERFIGRVTRKRD 510
              KT  +YPKRGQT+EL CES+ +KGKG+CKV  TGFV+MCDR LPGERF+GR+TR++ 
Sbjct: 56  SNEKTAPYYPKRGQTVELVCESLGFKGKGICKVDGTGFVVMCDRALPGERFLGRITRRKG 115

Query: 511 NYAEVKKLKTLSPHRDAVEAPCEYASHCGGCKTQNLLYEAQVRAKEQQVRELTVHVGRFS 690
           +YAEV K+KT+SPH+D VEAPCEYAS+CGGCKTQNL YEAQ++AKE+QV EL  HVGRFS
Sbjct: 116 SYAEVTKIKTISPHKDLVEAPCEYASYCGGCKTQNLSYEAQLKAKEEQVHELIRHVGRFS 175

Query: 691 --NKELESIMKPIVPCDIQFHYRNKMEFSFGPKKWVPIELLEERGSNSNDDYALGLHAPG 864
             N  LE ++KPIV CDIQF+YRNKMEFSFGP++W+PIE+L E+  +   ++ALGLHAPG
Sbjct: 176 DNNPGLEIVLKPIVACDIQFNYRNKMEFSFGPQRWLPIEMLHEK-EDGPKNFALGLHAPG 234

Query: 865 FFDKVLNVDICLLQSEPAN 921
           FFDKVLNVD CLLQSEP N
Sbjct: 235 FFDKVLNVDKCLLQSEPGN 253


>ref|NP_188767.2| RNA methyltransferase family protein [Arabidopsis thaliana]
           gi|9280234|dbj|BAB01724.1| RNA methyltransferase-like
           protein [Arabidopsis thaliana]
           gi|332642969|gb|AEE76490.1| RNA methyltransferase family
           protein [Arabidopsis thaliana]
          Length = 554

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/261 (59%), Positives = 189/261 (72%), Gaps = 8/261 (3%)
 Frame = +1

Query: 163 AAMPSFGLRRLNF-SHPWLVNFRXXXXXXXXXXXXXXXXXXFEPTQSNSTTTTLNEDNKP 339
           AA P+ GLR +   +  WL  FR                   E +  N     LN++N  
Sbjct: 3   AATPAHGLRYVVVPTRSWLHRFRCCSSSLAPLSPS-------EFSGGNKAQKKLNDENNT 55

Query: 340 -----KTTSFYPKRGQTLELECESIAYKGKGVCKVADTGFVLMCDRVLPGERFIGRVTRK 504
                KT  +YPKRG+T+EL CES+ +KGKG+CKV  TG+V+MCDR LPGERF+GRVTR+
Sbjct: 56  NVSNEKTAPYYPKRGETVELVCESLGFKGKGICKVDGTGYVVMCDRALPGERFLGRVTRR 115

Query: 505 RDNYAEVKKLKTLSPHRDAVEAPCEYASHCGGCKTQNLLYEAQVRAKEQQVRELTVHVGR 684
           + +YAEV K+KT+SPH+D VEAPCEYAS+CGGCKTQNL YEAQ+RAKE+QV EL  HVGR
Sbjct: 116 KGSYAEVTKMKTISPHKDLVEAPCEYASYCGGCKTQNLSYEAQLRAKEEQVHELIRHVGR 175

Query: 685 FS--NKELESIMKPIVPCDIQFHYRNKMEFSFGPKKWVPIELLEERGSNSNDDYALGLHA 858
           FS  N  LE ++KPIV CDIQFHYRNKMEFSFGP++W+PIE+L ER  +   ++ALGLHA
Sbjct: 176 FSDNNPGLEIVLKPIVACDIQFHYRNKMEFSFGPQRWLPIEMLNER-QDGPKNFALGLHA 234

Query: 859 PGFFDKVLNVDICLLQSEPAN 921
           PGFFDKVLNVD CLLQSEP N
Sbjct: 235 PGFFDKVLNVDKCLLQSEPGN 255


>gb|AAL85018.1| unknown protein [Arabidopsis thaliana]
          Length = 564

 Score =  307 bits (786), Expect = 3e-81
 Identities = 156/261 (59%), Positives = 189/261 (72%), Gaps = 8/261 (3%)
 Frame = +1

Query: 163 AAMPSFGLRRLNF-SHPWLVNFRXXXXXXXXXXXXXXXXXXFEPTQSNSTTTTLNEDNKP 339
           AA P+ GLR +   +  WL  FR                   E +  N     LN++N  
Sbjct: 13  AATPAHGLRYVVVPTRSWLHRFRCCSSSLAPLSPS-------EFSGGNKAQKKLNDENNT 65

Query: 340 -----KTTSFYPKRGQTLELECESIAYKGKGVCKVADTGFVLMCDRVLPGERFIGRVTRK 504
                KT  +YPKRG+T+EL CES+ +KGKG+CKV  TG+V+MCDR LPGERF+GRVTR+
Sbjct: 66  NVSNEKTAPYYPKRGETVELVCESLGFKGKGICKVDGTGYVVMCDRALPGERFLGRVTRR 125

Query: 505 RDNYAEVKKLKTLSPHRDAVEAPCEYASHCGGCKTQNLLYEAQVRAKEQQVRELTVHVGR 684
           + +YAEV K+KT+SPH+D VEAPCEYAS+CGGCKTQNL YEAQ+RAKE+QV EL  HVGR
Sbjct: 126 KGSYAEVTKMKTISPHKDLVEAPCEYASYCGGCKTQNLSYEAQLRAKEEQVHELIRHVGR 185

Query: 685 FS--NKELESIMKPIVPCDIQFHYRNKMEFSFGPKKWVPIELLEERGSNSNDDYALGLHA 858
           FS  N  LE ++KPIV CDIQFHYRNKMEFSFGP++W+PIE+L ER  +   ++ALGLHA
Sbjct: 186 FSDNNPGLEIVLKPIVACDIQFHYRNKMEFSFGPQRWLPIEMLNER-QDGPKNFALGLHA 244

Query: 859 PGFFDKVLNVDICLLQSEPAN 921
           PGFFDKVLNVD CLLQSEP N
Sbjct: 245 PGFFDKVLNVDKCLLQSEPGN 265