BLASTX nr result

ID: Cnidium21_contig00006363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006363
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN15318.1| isoamylase isoform 2 [Solanum tuberosum]               145   1e-32
ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Viti...   144   3e-32
ref|XP_002889452.1| ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata sub...   116   7e-24
ref|XP_004164565.1| PREDICTED: LOW QUALITY PROTEIN: isoamylase 2...   115   1e-23
ref|XP_004136188.1| PREDICTED: isoamylase 2, chloroplastic-like ...   115   1e-23

>gb|AAN15318.1| isoamylase isoform 2 [Solanum tuberosum]
          Length = 878

 Score =  145 bits (365), Expect = 1e-32
 Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 1/215 (0%)
 Frame = +3

Query: 201 MATFPVSSIIRSNGFNGRATDSSNLVFAGDITSKRIVAQRLGKKDGQRNLVFGGVAMSAE 380
           MAT P+   + S   +  +T+S+ LV +      +IV     +K    ++ F G+  + +
Sbjct: 1   MATSPIQLAVHSRLLSYGSTESTKLVPSSSGNRGKIVCSL--RKLELEDMNFSGIGRNND 58

Query: 381 NRSYHE-HKQNVLITSQSFVLHTPEKVWKYLFRTESGDLVKVWIEMKNNNYCVHVEVLSP 557
             +    H++  L  S+  ++ + ++V  YLFRT+ G  VKV +E  N  Y V VEVL  
Sbjct: 59  QEAPRRAHRRKALSASRISLVPSAKRVPTYLFRTDIGGQVKVLVERTNGKYKVLVEVLPL 118

Query: 558 QLSDSKSDLLMVWGMYRSDSSSFMPMDHQSSSLISAQNTTETPLLLKSSGKIAVELNLEA 737
           +LS + S+L+MVWG++RSD+S FMP+D          +T ETP +   SGK+ VEL+ EA
Sbjct: 119 ELSYAHSELVMVWGLFRSDASCFMPLDLNRRGADGKSSTVETPFVQGPSGKVTVELDFEA 178

Query: 738 NLAPFYLSFTLKSRSSDGSRISEIRSHRNTNFCVP 842
           +LAPFY+SF +KS+       SEIRSHRNTNF VP
Sbjct: 179 SLAPFYISFYMKSQLVSDMENSEIRSHRNTNFVVP 213


>ref|XP_002271798.1| PREDICTED: isoamylase 2, chloroplastic [Vitis vinifera]
          Length = 882

 Score =  144 bits (362), Expect = 3e-32
 Identities = 93/225 (41%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
 Frame = +3

Query: 201 MATFPVSSIIRSNGFNGRATDSSNLVFAGDITSKRIVAQRLGKKDGQRNLVFGGVAMSAE 380
           M T   S +IR    N  A DSS LV A        VA  L K D +R  + G VA +A 
Sbjct: 1   MTTLIPSLVIRPCCVNCGARDSSKLVAATHYICGNKVAHGLEKMDLERKEILGVVAQNAT 60

Query: 381 NRSYHEHKQNVLITSQSFVLHTP-----------EKVWKYLFRTESGDLVKVWIEMKNNN 527
              +      V  TS   +  T            E    YLF TE G  VKV +  KN  
Sbjct: 61  RNCFRNINWKVSATSHIAIEETENRYSTTESEELESRLNYLFLTEIGGQVKVIVGKKNKK 120

Query: 528 YCVHVEVLSPQLSDSKSDLLMVWGMYRSDSSSFMPMDHQSSSLISAQNTTETPLLLKSSG 707
           Y V +EV S QL +S + L++ WG++RS+SS FMP+D Q+       NTTE P + +SSG
Sbjct: 121 YIVSIEVSSLQLYNSDNKLILSWGVFRSNSSCFMPVDFQNLVPEVGSNTTEIPFMERSSG 180

Query: 708 KIAVELNLEANLAPFYLSFTLKSRSSDGSRISEIRSHRNTNFCVP 842
             A++L+ EAN APFYLSF LKS        S+IRSHR TNFC+P
Sbjct: 181 SFALKLDFEANHAPFYLSFLLKSTLDTDLSSSDIRSHRKTNFCIP 225


>ref|XP_002889452.1| ATISA2/BE2/DBE1/ISA2 [Arabidopsis lyrata subsp. lyrata]
           gi|297335294|gb|EFH65711.1| ATISA2/BE2/DBE1/ISA2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 872

 Score =  116 bits (290), Expect = 7e-24
 Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
 Frame = +3

Query: 450 EKVWKYLFRTESGDLVKVWIEMKNNNYCVHVEVLSPQLS-DSKSDLLMVWGMYRSDSSSF 626
           +KV  Y FRT+SG LVKV +E K   Y + V V S +L+ D KS L+MVWG+YRSDSS F
Sbjct: 82  KKVTSYSFRTKSGALVKVKVEQKREKYSIMVYVSSLELTGDDKSRLVMVWGVYRSDSSCF 141

Query: 627 MPMDHQSSSLISAQNTTETPLLLKSSGKIAVELNLEANLAPFYLSFTLKSRSSDGSRISE 806
           +P+D ++SS  S  +TTETP +  S  ++ + L  +   +PFYLSF LK  S       E
Sbjct: 142 LPLDFENSSQDSQTHTTETPFVKSSLSELMLGLEFDGKESPFYLSFHLKLVSGRDPDGQE 201

Query: 807 IRSHRNTNFCVP 842
           + +HR+T+FC+P
Sbjct: 202 MLTHRDTDFCIP 213


>ref|XP_004164565.1| PREDICTED: LOW QUALITY PROTEIN: isoamylase 2, chloroplastic-like
           [Cucumis sativus]
          Length = 885

 Score =  115 bits (288), Expect = 1e-23
 Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
 Frame = +3

Query: 201 MATFPVSSIIRSNG-FNGRATDSSNLVFAGDITSKRIVAQRLGKKDGQRNLVFG-----G 362
           MATF  S +I+    +N   T+S  L  +  +T  +    + GK D  R L  G      
Sbjct: 1   MATFLSSLVIQPFCVYNCGVTESPKLAASDHLTYGQKTKYQFGKMDEARMLAHGENKVGA 60

Query: 363 VAMSAENRSYHEHKQNVLITSQSFVL------HTPEKVWKYLFRTESGDLVKVWIEMKNN 524
           V  S  N S    K  + +      L          +V  YLFRTE GDLV V++  K +
Sbjct: 61  VKSSHRNLSKTYAKSGISVGKSGQRLGIGGKSKEQRRVATYLFRTEFGDLVNVFVGKKGS 120

Query: 525 NYCVHVEVLSPQLSDSKSDLLMVWGMYRSDSSSFMPMDHQSSSLISAQNTTETPLLLKSS 704
            + V++EV S QL      LL+ WG+YRSDS+   P + +SS        TETP +  S 
Sbjct: 121 TFTVNIEVPSMQLVSIDEALLLSWGVYRSDSALVTP-NFESSPPDETTGATETPFVKTSE 179

Query: 705 GKIAVELNLEANLAPFYLSFTLKSRSSDGSRISEIRSHRNTNFCVP 842
           GK +VEL  +A   PFYLSF LK      S  SEIRSH+ T+F VP
Sbjct: 180 GKFSVELEFDAKHTPFYLSFVLKYPMGVDSGSSEIRSHKKTSFSVP 225


>ref|XP_004136188.1| PREDICTED: isoamylase 2, chloroplastic-like [Cucumis sativus]
          Length = 885

 Score =  115 bits (288), Expect = 1e-23
 Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
 Frame = +3

Query: 201 MATFPVSSIIRSNG-FNGRATDSSNLVFAGDITSKRIVAQRLGKKDGQRNLVFG-----G 362
           MATF  S +I+    +N   T+S  L  +  +T  +    + GK D  R L  G      
Sbjct: 1   MATFLSSLVIQPFCVYNCGVTESPKLAASDHLTYGQKTKYQFGKMDEARMLAHGENKVGA 60

Query: 363 VAMSAENRSYHEHKQNVLITSQSFVL------HTPEKVWKYLFRTESGDLVKVWIEMKNN 524
           V  S  N S    K  + +      L          +V  YLFRTE GDLV V++  K +
Sbjct: 61  VKSSHRNLSKTYAKSGISVGKSGQRLGIGGKSKEQRRVATYLFRTEFGDLVNVFVGKKGS 120

Query: 525 NYCVHVEVLSPQLSDSKSDLLMVWGMYRSDSSSFMPMDHQSSSLISAQNTTETPLLLKSS 704
            + V++EV S QL      LL+ WG+YRSDS+   P + +SS        TETP +  S 
Sbjct: 121 TFTVNIEVPSMQLVSIDEALLLSWGVYRSDSALVTP-NFESSPPDETTGATETPFVKTSE 179

Query: 705 GKIAVELNLEANLAPFYLSFTLKSRSSDGSRISEIRSHRNTNFCVP 842
           GK +VEL  +A   PFYLSF LK      S  SEIRSH+ T+F VP
Sbjct: 180 GKFSVELEFDAKHTPFYLSFVLKYPMGVDSGSSEIRSHKKTSFSVP 225


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