BLASTX nr result

ID: Cnidium21_contig00006345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006345
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|1...   108   3e-22
ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_003518888.1| PREDICTED: signal recognition particle 9 kDa...   105   5e-21
ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   103   1e-20
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   103   1e-20

>ref|XP_002306822.1| predicted protein [Populus trichocarpa] gi|118481739|gb|ABK92809.1|
           unknown [Populus trichocarpa]
           gi|222856271|gb|EEE93818.1| predicted protein [Populus
           trichocarpa]
          Length = 103

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/55 (90%), Positives = 53/55 (96%)
 Frame = +3

Query: 141 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQ 305
           MVYITSWDDFV+RSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQ
Sbjct: 1   MVYITSWDDFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQ 55


>ref|XP_002302071.1| predicted protein [Populus trichocarpa] gi|222843797|gb|EEE81344.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/55 (87%), Positives = 52/55 (94%)
 Frame = +3

Query: 141 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQ 305
           MVY+ SWD+FVERSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQ
Sbjct: 1   MVYMASWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQ 55


>ref|XP_003518888.1| PREDICTED: signal recognition particle 9 kDa protein-like [Glycine
           max]
          Length = 103

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/55 (85%), Positives = 53/55 (96%)
 Frame = +3

Query: 141 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQ 305
           MVYITSWD+FVERSVQLFRA PD TRYVMKYR+CDGKLVLKVTD+++CLK+KTDQ
Sbjct: 1   MVYITSWDEFVERSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRQCLKYKTDQ 55


>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/55 (85%), Positives = 52/55 (94%)
 Frame = +3

Query: 141 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQ 305
           MVYI SWD+FV+RSVQLFRA PD TRYVMKYR+CDGKLVLKVTD++ECLKFKTDQ
Sbjct: 1   MVYIESWDEFVDRSVQLFRADPDSTRYVMKYRHCDGKLVLKVTDNRECLKFKTDQ 55


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  103 bits (258), Expect = 1e-20
 Identities = 47/55 (85%), Positives = 52/55 (94%)
 Frame = +3

Query: 141 MVYITSWDDFVERSVQLFRAHPDKTRYVMKYRNCDGKLVLKVTDDKECLKFKTDQ 305
           MVYI SWD+FV+RSVQLFRA P+ TRYVMKYR+CDGKLVLKVTD+KECLKFKTDQ
Sbjct: 1   MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQ 55


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