BLASTX nr result

ID: Cnidium21_contig00006344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006344
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa...   100   1e-19
ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arab...   100   1e-19
ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabi...   100   1e-19
ref|XP_004145379.1| PREDICTED: signal recognition particle 9 kDa...   100   2e-19
gb|AFK36667.1| unknown [Lotus japonicus]                               99   4e-19

>ref|XP_002282269.1| PREDICTED: signal recognition particle 9 kDa protein [Vitis
           vinifera] gi|297735510|emb|CBI17950.3| unnamed protein
           product [Vitis vinifera]
          Length = 103

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -1

Query: 520 LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 356
           LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVD +EV GKE  E QPAKKGRGRKQ
Sbjct: 49  LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDISEVTGKEAMEVQPAKKGRGRKQ 103


>ref|XP_002875940.1| hypothetical protein ARALYDRAFT_906164 [Arabidopsis lyrata subsp.
           lyrata] gi|297321778|gb|EFH52199.1| hypothetical protein
           ARALYDRAFT_906164 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = -1

Query: 520 LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 356
           LKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD +EV GKEQ E QPAKKGRGRKQ
Sbjct: 49  LKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103


>ref|NP_190479.1| signal recognition particle subunit SRP9 [Arabidopsis thaliana]
           gi|12230639|sp|Q9SMU7.1|SRP09_ARATH RecName: Full=Signal
           recognition particle 9 kDa protein; Short=SRP9
           gi|6522556|emb|CAB62000.1| signal recognition particle
           subunit 9-like [Arabidopsis thaliana]
           gi|21553473|gb|AAM62566.1| signal recognition particle 9
           kDa protein SRP9 [Arabidopsis thaliana]
           gi|28466801|gb|AAO44009.1| At3g49100 [Arabidopsis
           thaliana] gi|110736135|dbj|BAF00039.1| signal
           recognition particle subunit 9 - like [Arabidopsis
           thaliana] gi|332644977|gb|AEE78498.1| signal recognition
           particle subunit SRP9 [Arabidopsis thaliana]
          Length = 103

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/55 (87%), Positives = 51/55 (92%)
 Frame = -1

Query: 520 LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 356
           LKFKTDQAQ+AKKMEKLNNIFFTLMARGP+VD +EV GKEQ E QPAKKGRGRKQ
Sbjct: 49  LKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103


>ref|XP_004145379.1| PREDICTED: signal recognition particle 9 kDa protein-like isoform 1
           [Cucumis sativus] gi|449455278|ref|XP_004145380.1|
           PREDICTED: signal recognition particle 9 kDa
           protein-like isoform 2 [Cucumis sativus]
           gi|449474209|ref|XP_004154105.1| PREDICTED: signal
           recognition particle 9 kDa protein-like isoform 1
           [Cucumis sativus] gi|449474211|ref|XP_004154106.1|
           PREDICTED: signal recognition particle 9 kDa
           protein-like isoform 2 [Cucumis sativus]
           gi|449528736|ref|XP_004171359.1| PREDICTED: signal
           recognition particle 9 kDa protein-like isoform 1
           [Cucumis sativus] gi|449528738|ref|XP_004171360.1|
           PREDICTED: signal recognition particle 9 kDa
           protein-like isoform 2 [Cucumis sativus]
          Length = 103

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/55 (85%), Positives = 51/55 (92%)
 Frame = -1

Query: 520 LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 356
           LKFKTDQAQDAKKMEKLNNIFFTLMARGP+VD +EV GK+Q +AQP KKGRGRKQ
Sbjct: 49  LKFKTDQAQDAKKMEKLNNIFFTLMARGPDVDISEVTGKDQVDAQPTKKGRGRKQ 103


>gb|AFK36667.1| unknown [Lotus japonicus]
          Length = 103

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = -1

Query: 520 LKFKTDQAQDAKKMEKLNNIFFTLMARGPEVDFNEVAGKEQAEAQPAKKGRGRKQ 356
           LK+KTDQ+Q+AKKMEKLNNIFFTLMARGPEVD +EV GKEQ +AQPAK+GRGRKQ
Sbjct: 49  LKYKTDQSQEAKKMEKLNNIFFTLMARGPEVDLSEVTGKEQTDAQPAKRGRGRKQ 103


Top