BLASTX nr result

ID: Cnidium21_contig00006327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006327
         (1601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   314   4e-83
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   305   3e-80
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-53
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...   153   1e-34
ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-32

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
            gi|222874093|gb|EEF11224.1| f-box family protein [Populus
            trichocarpa]
          Length = 441

 Score =  314 bits (805), Expect = 4e-83
 Identities = 177/415 (42%), Positives = 246/415 (59%), Gaps = 8/415 (1%)
 Frame = +3

Query: 6    LKQRIKKEKERSMLIAIEKIDYLPENLIVEILSWLSVKDLLQFKSVCKSWYAIISSPXXX 185
            LK+R +KE+E S+++A      LPE++++EILS L VK+LLQFK VCKSWYAII+SP   
Sbjct: 20   LKERDQKEREMSVVMATMTGHPLPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNFI 79

Query: 186  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLLVQFYVSHA-E 362
                                                           CLLVQ+ V+ A E
Sbjct: 80   SKHLRNYYSKSDDSD--------------------------------CLLVQYCVTQAGE 107

Query: 363  LHLYELLVDETTRVLAYEKINSMPIKNSYVCGPCDGLYYVYNYNWKVRALWNPAINEFKT 542
            L   ELL+DET +VL+Y  + +MP  + ++CGPCDG++Y+Y   +  RA WNPA+NEFK 
Sbjct: 108  LESLELLLDETPKVLSYASLGNMPFHSPFLCGPCDGIFYMYRDYYDFRAFWNPAVNEFKF 167

Query: 543  LPEIICKPDLSAEFNDASSED-YGFGFDHVTRDYKVVVMKFYW--NVDVHRDLKHPVSVF 713
            LP +   P+  + F+ +   D YGFG   VT+DY+VVVMK YW    +     ++P+ VF
Sbjct: 168  LPPL---PNPPSNFSYSPQYDAYGFGLHPVTKDYEVVVMKDYWREKQEERGGCRYPLRVF 224

Query: 714  VYSLRTDSWRFCGDLAKAYDLKSNKCYIYVNGCCYWFGSFDY---TSEVIISFDMANDSF 884
            VYS  T SWR  GDL++ Y L++NKCYI +NG  +W GS++      +VIISFDMA ++ 
Sbjct: 225  VYSSSTGSWRHWGDLSRYYYLQNNKCYICMNGVFFWLGSYEIFGDPEKVIISFDMATETC 284

Query: 885  KEIDVPDYVQP-SSKCLAVYDDSLVFLSLHETEKNFDMWTWSDGCWTKKFTMGPLRDVWC 1061
            +EI +PD  +  + +CLA Y DSL  L +H  EK   MWT ++ CW K F++GPL ++  
Sbjct: 285  QEIQLPDCGKSHNCQCLATYQDSLAILDVH--EKFLHMWTLNERCWVKNFSIGPLPEISY 342

Query: 1062 PVGHWKCNRLLLQWNDGKLVLFDPDTQETKDLAFQNEARTRCEGVFAYMESLVSI 1226
            P+GHWK ++L+L  + G+L+L DP TQE   L        RC GVFAY ESLV +
Sbjct: 343  PIGHWKNSKLILVSDSGELILCDPSTQEISGLGLTR--WVRCVGVFAYKESLVLV 395


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  305 bits (780), Expect = 3e-80
 Identities = 179/420 (42%), Positives = 250/420 (59%), Gaps = 8/420 (1%)
 Frame = +3

Query: 15   RIKKEKERSMLIAIEKI--DYLPENLIVEILSWLSVKDLLQFKSVCKSWYAIISSPXXXX 188
            R + +KER M IA+E +  D LPE++I+EILS L VK+LLQFK VCKSW+AII+SP    
Sbjct: 24   RERSQKEREMSIAMETMTGDPLPEDVIIEILSRLPVKNLLQFKCVCKSWHAIITSPKLIS 83

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLLVQFYVSHA-EL 365
                                                          CLL Q+ V+ A E+
Sbjct: 84   KHLRNYYDKNDSD---------------------------------CLLAQYRVTQAGEI 110

Query: 366  HLYELLVDET-TRVLAYEKINSMPIKNSYVCGPCDGLYYVYNYNWKVRALWNPAINEFKT 542
              +ELLVDET TR L+Y  ++ MP ++ Y+ GPCDG++Y+Y + +   ALWNPAINE KT
Sbjct: 111  ASFELLVDETPTRALSYGLLDRMPFQSPYIYGPCDGIFYLYGHFYDFHALWNPAINELKT 170

Query: 543  LPEIICKPDLSAEFNDASSEDYGFGFDHVTRDYKVVVMKFYWNVDVHR-DLKHPVSVFVY 719
            LP  I  P  S  ++   +  YGF    VT+D +V+VM+ YW  +    + ++P+SVFVY
Sbjct: 171  LPP-IPNPPFSFSYSPLWNA-YGFRLHPVTKDCEVIVMREYWREEEGAWEDRYPLSVFVY 228

Query: 720  SLRTDSWRFCGDLAKAYDLKSNKCYIYVNGCCYWFGSFDYTS--EVIISFDMANDSFKEI 893
            +L +DSWR+ GDL++ Y L++NKCYI V G  YW GS+      EV+I+FDMA +  +EI
Sbjct: 229  TLSSDSWRYWGDLSRYYHLRNNKCYICVEGVFYWLGSYGACGDPEVVINFDMATNVCQEI 288

Query: 894  DVPDYVQP-SSKCLAVYDDSLVFLSLHETEKNFDMWTWSDGCWTKKFTMGPLRDVWCPVG 1070
             +PDY +  +S+ LAVY+DS+  L + E+     +WT  + CWTKKF +GPL  V  PVG
Sbjct: 289  QLPDYDKSINSESLAVYNDSIALLVVQESV--LHVWTLDERCWTKKFVVGPLLGVQYPVG 346

Query: 1071 HWKCNRLLLQWNDGKLVLFDPDTQETKDLAFQNEARTRCEGVFAYMESLVSIKEIKDKNE 1250
            HW+ N ++L  +  +L+L DP TQE   L F+     RCEG+FAY ESLV +K   ++ E
Sbjct: 347  HWQNNTIILISDSYELLLCDPRTQEMSGLGFEG-GTIRCEGIFAYKESLVPVKNGHEEAE 405


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  216 bits (549), Expect = 2e-53
 Identities = 123/291 (42%), Positives = 175/291 (60%), Gaps = 3/291 (1%)
 Frame = +3

Query: 369  LYELLVDETTRVLAYEKINSMPIKNSYVCGPCDGLYYVYNYNWKVRALWNPAINEFKTLP 548
            L EL  DE+   L+++ ++  PI+   +CGPC+G++YV + +     LWNPA  EFK LP
Sbjct: 71   LLELFQDESLTDLSHQGLDP-PIRGR-LCGPCNGIFYVDSEDSSGSGLWNPATKEFKLLP 128

Query: 549  EIIC-KPDLSAEFNDASSEDYGFGFDHVTRDYKVVVMKFYWNVDVHRDLKHPVS-VFVYS 722
            E I  K  L   + D+    YGFGFD VT DYKVVV++  +  + + + K P S V VY+
Sbjct: 129  EKIRNKSSLPLYYEDS----YGFGFDPVTNDYKVVVIRESYTREYYLE-KFPSSLVIVYT 183

Query: 723  LRTDSWRFCGDLAKAYDLKSNKCYIYVNGCCYWFGSFDYTSEVIISFDMANDSFKEIDVP 902
            LRTDSWR  G L + Y L  N CY  V+G  YW         VI+SF+MA D+F+EI  P
Sbjct: 184  LRTDSWRCWGSLDQGYTLLGNYCYTNVDGVYYWQAGHGVHMNVILSFNMATDAFQEIQEP 243

Query: 903  DYVQPS-SKCLAVYDDSLVFLSLHETEKNFDMWTWSDGCWTKKFTMGPLRDVWCPVGHWK 1079
            DY +P+ S  L +Y DS+ F ++H  EK  D+W  ++GCW ++F   PL ++  PV HWK
Sbjct: 244  DYDKPAYSTRLILYHDSIAFSTVHNVEKFLDIWVLNEGCWIRQFKSRPLLELRNPVAHWK 303

Query: 1080 CNRLLLQWNDGKLVLFDPDTQETKDLAFQNEARTRCEGVFAYMESLVSIKE 1232
               ++L  ++ +L+L+D + QE KDL F+      C  +  Y ESLVSIK+
Sbjct: 304  NGNVILDSDNDQLMLYDTNKQELKDLRFKGTG--VCYEILVYRESLVSIKD 352


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  153 bits (386), Expect = 1e-34
 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 3/208 (1%)
 Frame = +3

Query: 369 LYELLVDETTRVLAYEKINSMPIKNSYVCGPCDGLYYVYNYNWKVRALWNPAINEFKTLP 548
           L EL  DE+   L+++ ++  PI+   +CGPC+G++YV + +     LWNPA  EFK LP
Sbjct: 71  LLELFQDESLTDLSHQGLDP-PIRGR-LCGPCNGIFYVDSEDSSGSGLWNPATKEFKLLP 128

Query: 549 EIIC-KPDLSAEFNDASSEDYGFGFDHVTRDYKVVVMKFYWNVDVHRDLKHPVS-VFVYS 722
           E I  K  L   + D+    YGFGFD VT DYKVVV++  +  + + + K P S V VY+
Sbjct: 129 EKIRNKSSLPLYYEDS----YGFGFDPVTNDYKVVVIRESYTREYYLE-KFPSSLVIVYT 183

Query: 723 LRTDSWRFCGDLAKAYDLKSNKCYIYVNGCCYWFGSFDYTSEVIISFDMANDSFKEIDVP 902
           LRTDSWR  G L + Y L  N CY  V+G  YW         VI+SF+MA D+F+EI  P
Sbjct: 184 LRTDSWRCWGSLDQGYTLLGNYCYTNVDGVYYWQAGHGVHMNVILSFNMATDAFQEIQEP 243

Query: 903 DYVQP-SSKCLAVYDDSLVFLSLHETEK 983
           DY +P SS  L +Y DS+ F ++H  EK
Sbjct: 244 DYDKPASSTRLILYHDSIAFSTVHNVEK 271


>ref|XP_002318136.1| predicted protein [Populus trichocarpa] gi|222858809|gb|EEE96356.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  146 bits (368), Expect = 2e-32
 Identities = 81/185 (43%), Positives = 115/185 (62%), Gaps = 2/185 (1%)
 Frame = +3

Query: 450 VCGPCDGLYYVYNYNWKVRALWNPAINEFKTLP-EIICKPDLSAEFNDASSEDYGFGFDH 626
           +CGPC+G++YV + +     LWNPA  EFK LP +I  K  L   ++D+S    GFGFD 
Sbjct: 40  LCGPCNGIFYVDSEDSSGSGLWNPATKEFKLLPVKIHNKSSLPLYYDDSS----GFGFDP 95

Query: 627 VTRDYKVVVMKFYWNVDVHRDLKHPVS-VFVYSLRTDSWRFCGDLAKAYDLKSNKCYIYV 803
           VT +YKVVV++  +  + + + K P S V VY+ RTDSWR  G L + Y L SN CY  V
Sbjct: 96  VTNNYKVVVIRESYTREYYLE-KFPSSLVIVYTFRTDSWRCWGSLDQGYTLLSNYCYKSV 154

Query: 804 NGCCYWFGSFDYTSEVIISFDMANDSFKEIDVPDYVQPSSKCLAVYDDSLVFLSLHETEK 983
           +G  YW     +   VI+SF+MA D+F+EI  P+Y +P+   L +Y DS+ F ++H+ EK
Sbjct: 155 DGVSYWRAGHGHMG-VILSFNMATDAFQEIQGPNYDKPAYSRLVLYHDSIAFSTVHDIEK 213

Query: 984 NFDMW 998
             D+W
Sbjct: 214 FLDIW 218


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