BLASTX nr result

ID: Cnidium21_contig00006326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006326
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   179   8e-43
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   172   1e-40
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37
gb|ACU18590.1| unknown [Glycine max]                                   99   2e-18
ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06...    98   4e-18

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  179 bits (455), Expect = 8e-43
 Identities = 92/200 (46%), Positives = 124/200 (62%), Gaps = 6/200 (3%)
 Frame = +1

Query: 1   VVMKGYWMNNDDRHSDLKHHVSVLVYSLRTDSWQYCGDLTKAYDLESNKCYIYVNGCCYW 180
           VVMK YW    +     ++ + V VYS  T SW++ GDL++ Y L++NKCYI +NG  +W
Sbjct: 201 VVMKDYWREKQEERGGCRYPLRVFVYSSSTGSWRHWGDLSRYYYLQNNKCYICMNGVFFW 260

Query: 181 FGSLEYSCE---VIISFDMANDSFKEIDVPDYAQPSS-KCLAVYDDSLVFLSLHETEKNF 348
            GS E   +   VIISFDMA ++ +EI +PD  +  + +CLA Y DSL  L +HE  K  
Sbjct: 261 LGSYEIFGDPEKVIISFDMATETCQEIQLPDCGKSHNCQCLATYQDSLAILDVHE--KFL 318

Query: 349 DIWTWREGCWTKKFSLGPLPEVRSPVGHWKGNRLLLECKDRKLVLFDPDTQETKDLAFQE 528
            +WT  E CW K FS+GPLPE+  P+GHWK ++L+L     +L+L DP TQE   L    
Sbjct: 319 HMWTLNERCWVKNFSIGPLPEISYPIGHWKNSKLILVSDSGELILCDPSTQEISGLGL-T 377

Query: 529 RW--CEGVFAYMESLVSIKD 582
           RW  C GVFAY ESLV + +
Sbjct: 378 RWVRCVGVFAYKESLVLVNN 397


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  172 bits (437), Expect = 1e-40
 Identities = 93/206 (45%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
 Frame = +1

Query: 1   VVMKGYWMNNDDRHSDLKHHVSVLVYSLRTDSWQYCGDLTKAYDLESNKCYIYVNGCCYW 180
           +VM+ YW   +    D ++ +SV VY+L +DSW+Y GDL++ Y L +NKCYI V G  YW
Sbjct: 204 IVMREYWREEEGAWED-RYPLSVFVYTLSSDSWRYWGDLSRYYHLRNNKCYICVEGVFYW 262

Query: 181 FGSLEYSC---EVIISFDMANDSFKEIDVPDYAQP-SSKCLAVYDDSLVFLSLHETEKNF 348
            GS   +C   EV+I+FDMA +  +EI +PDY +  +S+ LAVY+DS+  L + E+  + 
Sbjct: 263 LGSYG-ACGDPEVVINFDMATNVCQEIQLPDYDKSINSESLAVYNDSIALLVVQESVLH- 320

Query: 349 DIWTWREGCWTKKFSLGPLPEVRSPVGHWKGNRLLLECKDRKLVLFDPDTQETKDLAFQE 528
            +WT  E CWTKKF +GPL  V+ PVGHW+ N ++L     +L+L DP TQE   L F+ 
Sbjct: 321 -VWTLDERCWTKKFVVGPLLGVQYPVGHWQNNTIILISDSYELLLCDPRTQEMSGLGFEG 379

Query: 529 RW--CEGVFAYMESLVSIKDKTEAGQ 600
               CEG+FAY ESLV +K+  E  +
Sbjct: 380 GTIRCEGIFAYKESLVPVKNGHEEAE 405


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  160 bits (406), Expect = 4e-37
 Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 2/183 (1%)
 Frame = +1

Query: 67  VLVYSLRTDSWQYCGDLTKAYDLESNKCYIYVNGCCYWFGSLEYSCEVIISFDMANDSFK 246
           V+VY+LRTDSW+  G L + Y L  N CY  V+G  YW         VI+SF+MA D+F+
Sbjct: 179 VIVYTLRTDSWRCWGSLDQGYTLLGNYCYTNVDGVYYWQAGHGVHMNVILSFNMATDAFQ 238

Query: 247 EIDVPDYAQPS-SKCLAVYDDSLVFLSLHETEKNFDIWTWREGCWTKKFSLGPLPEVRSP 423
           EI  PDY +P+ S  L +Y DS+ F ++H  EK  DIW   EGCW ++F   PL E+R+P
Sbjct: 239 EIQEPDYDKPAYSTRLILYHDSIAFSTVHNVEKFLDIWVLNEGCWIRQFKSRPLLELRNP 298

Query: 424 VGHWKGNRLLLECKDRKLVLFDPDTQETKDLAFQERW-CEGVFAYMESLVSIKDKTEAGQ 600
           V HWK   ++L+  + +L+L+D + QE KDL F+    C  +  Y ESLVSIKD     Q
Sbjct: 299 VAHWKNGNVILDSDNDQLMLYDTNKQELKDLRFKGTGVCYEILVYRESLVSIKDGIGCRQ 358

Query: 601 QPE 609
             E
Sbjct: 359 HEE 361


>gb|ACU18590.1| unknown [Glycine max]
          Length = 405

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 19/211 (9%)
 Frame = +1

Query: 1   VVMKGYWMNNDDRHSDLKHHVSVLVYSLRTDSWQYCGDLTKAYDLE---SNKCYIYVNGC 171
           VV+K  W+   D       + S  +YSL ++SW+          +E   S++ + Y N C
Sbjct: 170 VVLKDLWLKETDEREI--GYWSAELYSLNSNSWRKLDPSLLPLPIEIWGSSRVFTYANNC 227

Query: 172 CYWFGSLEYSC---EVIISFDMANDSFKEIDVPDYAQPSSKCLAV---YDDS----LVFL 321
           C+W+G +E S    +++++FDM  +SF++I VP     S +  A    +++S    ++  
Sbjct: 228 CHWWGFVEDSGATQDIVLAFDMVKESFRKIRVPKVRDSSDEKFATLVPFEESASIGVLVY 287

Query: 322 SLHETEKNFDIWT----WREGCWTKKFSLGPLPEVRSPVGHWKGNRLLLECKDRKLVLFD 489
            +   EK+FD+W     W EG W K++S+GP+      VG +  NRLL +  + +LVL+ 
Sbjct: 288 PVRGAEKSFDVWVMKDYWDEGSWVKQYSVGPVQVNHRIVGFYGTNRLLWKDSNERLVLY- 346

Query: 490 PDTQETKDLAFQERWCEGVFA--YMESLVSI 576
            D+++T+DL    ++ + + A  Y ESLVS+
Sbjct: 347 -DSEKTRDLQVYGKF-DSIRAARYTESLVSL 375


>ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 64/210 (30%), Positives = 107/210 (50%), Gaps = 18/210 (8%)
 Frame = +1

Query: 1   VVMKGYWMNNDDRHSDLKHHVSVLVYSLRTDSWQYCGDLTKAYDLE---SNKCYIYVNGC 171
           VV+K  W    D       + S  +YSL ++SW+          +E   S++ + Y N C
Sbjct: 170 VVLKDLWFKETDERQ--LGYWSAELYSLNSNSWRKLDPSLLPLPIEIWGSSRVFTYANNC 227

Query: 172 CYWFGSLEYSC---EVIISFDMANDSFKEIDVPDYAQPSSK---CLAVYDDS----LVFL 321
           C+W+G +E S    +V+++FDM  +SF++I VP     S +    L  +++S     +  
Sbjct: 228 CHWWGFVEESDATQDVVLAFDMVKESFRKIRVPKIRDSSDEKFGTLVPFEESASIGFLVY 287

Query: 322 SLHETEKNFDIWT----WREGCWTKKFSLGPLPEVRSPVGHWKGNRLLLECKDRKLVLFD 489
            +  TEK FD+W     W EG W K++S+GP+  +   VG +  NR   +  + +LVL+ 
Sbjct: 288 PVRGTEKRFDVWVMKDYWDEGSWVKQYSVGPVQVIYKLVGFYGTNRFFWKDSNERLVLY- 346

Query: 490 PDTQETKDL-AFQERWCEGVFAYMESLVSI 576
            D++ T+DL  + +        Y ESLVS+
Sbjct: 347 -DSENTRDLQVYGKHDSIRAAKYTESLVSL 375


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