BLASTX nr result

ID: Cnidium21_contig00006324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006324
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|2...   173   3e-41
gb|AFP99173.1| biotin carboxyl carrier protein [Vernicia fordii]      166   5e-39
ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002284374.1| PREDICTED: biotin carboxyl carrier protein o...   154   2e-35
gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha...   153   4e-35

>ref|XP_002305399.1| predicted protein [Populus trichocarpa] gi|222848363|gb|EEE85910.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  173 bits (439), Expect = 3e-41
 Identities = 119/270 (44%), Positives = 140/270 (51%), Gaps = 8/270 (2%)
 Frame = -3

Query: 787 ASFSVPCPKICAPAA----NLQLGQPKPIHSLVSFRPDSISSRAFLSGSSLPNTSPILGF 620
           AS SVPCPK    AA    N Q  QPKP   ++SF    IS++       L   S   GF
Sbjct: 2   ASISVPCPKTILVAAGVGSNAQNSQPKP---MISFPRAPISNQ----NPPLSLGSTFSGF 54

Query: 619 QASNRNQHEVLRVSGQLNAVSVEKSSNSVLVPDXXXXXXXXXXXSQDV---IPDASSITA 449
           +  NR Q  V++   QLN V VEKSSNSVLV D            +     IPD SSI+A
Sbjct: 55  EWPNRKQQAVMKAQAQLNEVMVEKSSNSVLVGDSESKAASSEGKDEPTESKIPDVSSISA 114

Query: 448 FMDQVADLIELVDSRDIMELQLKQENCEVLIRKKEALPQ-PPAAPYVMMQSPSXXXXXXX 272
           FM QV++L++LVDSRDI ELQLKQ  CE++IRKKEAL Q  PAAP + MQSP        
Sbjct: 115 FMTQVSELVKLVDSRDITELQLKQSGCELIIRKKEALQQSEPAAPVLPMQSP---YPHAM 171

Query: 271 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPMAGTFYRCAAPGSPPFXXXXX 92
                                               KCPMAGTFYR  APG PPF     
Sbjct: 172 FPAPPVAAPAPAPASPSSAPALPPPAKASSSSHPPLKCPMAGTFYRSPAPGEPPFVKVGD 231

Query: 91  XXXXXXVICIIEAMKLMNEIEAEHAGTVVD 2
                 V+CIIEAMKLMNEIEA+ +GT+ +
Sbjct: 232 KVQKGQVVCIIEAMKLMNEIEADQSGTITE 261


>gb|AFP99173.1| biotin carboxyl carrier protein [Vernicia fordii]
          Length = 270

 Score =  166 bits (420), Expect = 5e-39
 Identities = 114/268 (42%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
 Frame = -3

Query: 787 ASFSVPCPKICAPA---ANLQLGQPKPIHSLVSFRPDSISSRAFLSGSSLPNTSPILGFQ 617
           AS SVPCPK    A   +N     PK   S +SF P                 S +LGFQ
Sbjct: 2   ASISVPCPKTALVARFGSNATNPLPK---STISFPP---------------RASSLLGFQ 43

Query: 616 ASNRNQHEVLRVSGQLNAVSVEKSSNSVLVPDXXXXXXXXXXXSQDV---IPDASSITAF 446
            SNR Q  V +V  QLN V  EKSSNSV V D            +     IPDAS+I+AF
Sbjct: 44  WSNRKQSPVTKVQAQLNEVLAEKSSNSVPVLDNNSKVPSSEQKDEPAENNIPDASAISAF 103

Query: 445 MDQVADLIELVDSRDIMELQLKQENCEVLIRKKEALPQPPAAPYVMMQSPSXXXXXXXXX 266
           M QV+DL++LVDSRDI ELQLKQ  CE++IRKKEAL QPP  P +  Q            
Sbjct: 104 MTQVSDLVKLVDSRDITELQLKQLGCELIIRKKEALQQPP-PPVIAAQPSYQHAMLPSPP 162

Query: 265 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPMAGTFYRCAAPGSPPFXXXXXXX 86
                                             KCPMAGTFYRC APG PPF       
Sbjct: 163 LAAPASAPPSSTPPPPAPALPSPAKSSTSSHPQLKCPMAGTFYRCPAPGEPPFVKVRDKV 222

Query: 85  XXXXVICIIEAMKLMNEIEAEHAGTVVD 2
               V+CIIEAMKLMNEIEA+ +GT+ +
Sbjct: 223 QKGQVVCIIEAMKLMNEIEADQSGTIAE 250


>ref|XP_002323896.1| predicted protein [Populus trichocarpa] gi|222866898|gb|EEF04029.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  164 bits (415), Expect = 2e-38
 Identities = 115/271 (42%), Positives = 137/271 (50%), Gaps = 9/271 (3%)
 Frame = -3

Query: 787 ASFSVPCPKICAPAA----NLQLGQPKPIHSLVSF-RPDSISSRAFLSGSSLPNTSPILG 623
           AS SVPCPK    AA    N Q   PKP    +SF RP + +    LS  S      + G
Sbjct: 2   ASISVPCPKTVLVAAGTGSNAQNPLPKP---RISFPRPPNSNQNPSLSFGST-----VSG 53

Query: 622 FQASNRNQHEVLRVSGQLNAVSVEKSSNSVLVPDXXXXXXXXXXXSQDV---IPDASSIT 452
           F+  NR Q  V++V  QLN    +KSSNS LV D            +     IPD SSI+
Sbjct: 54  FEWPNRKQQAVVKVQAQLNEAIAKKSSNSALVVDTEPKVASSEGEDEPTESKIPDVSSIS 113

Query: 451 AFMDQVADLIELVDSRDIMELQLKQENCEVLIRKKEALPQ-PPAAPYVMMQSPSXXXXXX 275
           AFM QV++L++LVDSRDI ELQLKQ +CE++IRKKEAL Q  PAA  + MQ P       
Sbjct: 114 AFMTQVSELVKLVDSRDITELQLKQSDCELVIRKKEALQQSAPAAAILAMQPPYPHATFP 173

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPMAGTFYRCAAPGSPPFXXXX 95
                                                KCPMAGTFYR  APG PPF    
Sbjct: 174 APLPAAAPAPAAAIPSPAPAPALPSPAKASSSSHPPLKCPMAGTFYRSPAPGEPPFVKAG 233

Query: 94  XXXXXXXVICIIEAMKLMNEIEAEHAGTVVD 2
                  VICIIEAMKLMNEIEA+ +GT+ +
Sbjct: 234 DKVQKGQVICIIEAMKLMNEIEADQSGTITE 264


>ref|XP_002284374.1| PREDICTED: biotin carboxyl carrier protein of acetyl-CoA
           carboxylase 2, chloroplastic [Vitis vinifera]
           gi|296082996|emb|CBI22297.3| unnamed protein product
           [Vitis vinifera]
          Length = 270

 Score =  154 bits (389), Expect = 2e-35
 Identities = 96/219 (43%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
 Frame = -3

Query: 634 PILGFQASNRNQHEVLRVSGQLNAVSVEKSSNSV------LVPDXXXXXXXXXXXSQ-DV 476
           P  GFQ  N+ +  + ++  QLN V  EKSSNSV      +VP            SQ + 
Sbjct: 32  PRFGFQCPNQKETALPKLHAQLNEVEAEKSSNSVPLSTKLIVPSEGKYESARKISSQKNT 91

Query: 475 IPDASSITAFMDQVADLIELVDSRDIMELQLKQENCEVLIRKKEALPQPPA-APYVMMQS 299
           IPDASSI+AFM QV+DL++LVDSRDIMEL+LKQ  CE+LIRKKEALPQPPA A  + MQ 
Sbjct: 92  IPDASSISAFMSQVSDLVKLVDSRDIMELELKQLGCELLIRKKEALPQPPATASVITMQP 151

Query: 298 PSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPMAGTFYRCAAPG 119
           P                                            KCPMAGTFY+   PG
Sbjct: 152 PLPHSMLPYQPPPAQVVAPASTAPSVPTPALPAPAQTSKSSHPPLKCPMAGTFYQSPGPG 211

Query: 118 SPPFXXXXXXXXXXXVICIIEAMKLMNEIEAEHAGTVVD 2
            PPF           V+CI+EAMKLMNEIEA+ +GT+ +
Sbjct: 212 EPPFVKVGDKVQKGQVVCIVEAMKLMNEIEADQSGTIAE 250


>gb|ACT33948.1| biotin carboxyl carrier protein subunit [Jatropha curcas]
          Length = 270

 Score =  153 bits (387), Expect = 4e-35
 Identities = 111/267 (41%), Positives = 132/267 (49%), Gaps = 5/267 (1%)
 Frame = -3

Query: 787 ASFSVPCPKICAPAA-NLQLGQPKPIHSLVSFRPDSISSRAFLSGSSLPNTSPILGFQAS 611
           AS SVPCPK    A     +  P P +S VSF P                TS +LGFQ  
Sbjct: 2   ASISVPCPKTTLVARIGSNVENPLP-NSTVSFPP---------------LTSNLLGFQWC 45

Query: 610 NRNQHEVLRVSGQLNAVSVEKSSNSVLVPDXXXXXXXXXXXSQDV---IPDASSITAFMD 440
           N  Q  V ++  +LN V +EKSSNSV V +            +     I DAS I+AFM 
Sbjct: 46  NWKQSRVTKMQAKLNEVLLEKSSNSVPVLETNSNVPTPDEKDESTESNILDASQISAFMT 105

Query: 439 QVADLIELVDSRDIMELQLKQENCEVLIRKKEALPQ-PPAAPYVMMQSPSXXXXXXXXXX 263
           QV+DL++LVDSRDI ELQLKQ  C+++IRKKEAL Q PPAAP + M  P           
Sbjct: 106 QVSDLVKLVDSRDITELQLKQLGCQLIIRKKEALQQPPPAAPVIAM--PPSYQHTMLPSP 163

Query: 262 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCPMAGTFYRCAAPGSPPFXXXXXXXX 83
                                            KCPMAGTFYR  APG PPF        
Sbjct: 164 PPAAPASAPPSSPPLALALPPPAKTSSSSHPPLKCPMAGTFYRNPAPGEPPFVKVGDKVQ 223

Query: 82  XXXVICIIEAMKLMNEIEAEHAGTVVD 2
              V+CIIEAMKLMNEIEA+ AGT+ +
Sbjct: 224 KGQVVCIIEAMKLMNEIEADQAGTIAE 250


Top