BLASTX nr result
ID: Cnidium21_contig00006319
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00006319
(1283 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 201 4e-49
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 201 4e-49
ref|XP_002532622.1| Far upstream element-binding protein, putati... 197 4e-48
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 196 1e-47
ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicag... 193 7e-47
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 201 bits (510), Expect = 4e-49
Identities = 101/140 (72%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Frame = +3
Query: 33 YTEKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSG 212
+ EKSTY RFLVSNA AGSVIGKGGSTI++FQSQSGARIQLSRN+EFFPGTSDRIIM+SG
Sbjct: 29 FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISG 88
Query: 213 TVNNVLKGVELILDKLLNEFYLEEGD-AEPRSKVRLVVPNSSCXXXXXXXXATIKSFIEE 389
N ++K +ELIL KLL+E + E+GD A+PRSKVRL+VPNSSC +TIKSFIE+
Sbjct: 89 ATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIED 148
Query: 390 SQAGIKISPQDNSYAGISDR 449
SQA IKISPQDN+Y G++DR
Sbjct: 149 SQASIKISPQDNNYLGLTDR 168
Score = 133 bits (335), Expect = 9e-29
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 664 NHRPHNNKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRDD 843
N+ P+ G + SNSVTIGVADEHIGLV+GRGGRN+++ISQ SGARIKISDR D
Sbjct: 214 NYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGD 273
Query: 844 FMSGTTDRKVTITGSQRAIRIAEDMITQKVSSATDR 951
FMSGTTDRKVTITGSQRAIR AE MI QKV+SA++R
Sbjct: 274 FMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 201 bits (510), Expect = 4e-49
Identities = 101/140 (72%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Frame = +3
Query: 33 YTEKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSG 212
+ EKSTY RFLVSNA AGSVIGKGGSTI++FQSQSGARIQLSRN+EFFPGTSDRIIM+SG
Sbjct: 77 FMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISG 136
Query: 213 TVNNVLKGVELILDKLLNEFYLEEGD-AEPRSKVRLVVPNSSCXXXXXXXXATIKSFIEE 389
N ++K +ELIL KLL+E + E+GD A+PRSKVRL+VPNSSC +TIKSFIE+
Sbjct: 137 ATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIED 196
Query: 390 SQAGIKISPQDNSYAGISDR 449
SQA IKISPQDN+Y G++DR
Sbjct: 197 SQASIKISPQDNNYLGLTDR 216
Score = 133 bits (335), Expect = 9e-29
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 664 NHRPHNNKGPGVLQDDRNSNSVTIGVADEHIGLVLGRGGRNVIEISQVSGARIKISDRDD 843
N+ P+ G + SNSVTIGVADEHIGLV+GRGGRN+++ISQ SGARIKISDR D
Sbjct: 262 NYGPNGAGGKFQNNKEDRSNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGD 321
Query: 844 FMSGTTDRKVTITGSQRAIRIAEDMITQKVSSATDR 951
FMSGTTDRKVTITGSQRAIR AE MI QKV+SA++R
Sbjct: 322 FMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 197 bits (502), Expect = 4e-48
Identities = 100/138 (72%), Positives = 119/138 (86%), Gaps = 1/138 (0%)
Frame = +3
Query: 39 EKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTV 218
EK TY RFLVSNA AGSVIGKGG+TI++FQSQSGARIQLSRNYEFFPGTSDRII++SG +
Sbjct: 33 EKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILISGIL 92
Query: 219 NNVLKGVELILDKLLNEFYLEEG-DAEPRSKVRLVVPNSSCXXXXXXXXATIKSFIEESQ 395
++VLKGVEL+L KLL+E + E+G D +PR+KVRLVVPNSSC + IKSFIEESQ
Sbjct: 93 DDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQ 152
Query: 396 AGIKISPQDNSYAGISDR 449
AGIKISPQDN++ G++DR
Sbjct: 153 AGIKISPQDNNFYGLNDR 170
Score = 127 bits (318), Expect = 8e-27
Identities = 73/127 (57%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Frame = +1
Query: 574 YYIQSMSTPFXXXXXXXXXXXXXXXXX-KFQNHRPHNNKGPGVLQDDRNSNSVTIGVADE 750
+Y+Q+M PF KFQN++ +DR +NSVTIGVAD
Sbjct: 197 HYVQTMHAPFSYAVAYNSMNYGANGAGGKFQNNK-----------EDR-TNSVTIGVADA 244
Query: 751 HIGLVLGRGGRNVIEISQVSGARIKISDRDDFMSGTTDRKVTITGSQRAIRIAEDMITQK 930
HIGLV+GRGGRN++EISQVSGARIKISDR DFMSGT DRK+ ITGSQRAIR AE MI QK
Sbjct: 245 HIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMIMQK 304
Query: 931 VSSATDR 951
V+ A++R
Sbjct: 305 VAYASER 311
Score = 62.0 bits (149), Expect = 3e-07
Identities = 30/74 (40%), Positives = 47/74 (63%)
Frame = +3
Query: 48 TYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTVNNV 227
T R +V N+ GS+IGKGGS I F +S A I++S F G +DR++ V+GT+
Sbjct: 122 TKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQ 181
Query: 228 LKGVELILDKLLNE 269
++ ++LIL KL ++
Sbjct: 182 MRAIDLILSKLYDD 195
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 196 bits (498), Expect = 1e-47
Identities = 99/138 (71%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
Frame = +3
Query: 39 EKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTV 218
EK+TY RFLVSNA AGSVIGKGGSTI++FQSQSGARIQLSRN+EFFPGT+DRIIMVSG++
Sbjct: 32 EKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI 91
Query: 219 NNVLKGVELILDKLLNEFYLEEG-DAEPRSKVRLVVPNSSCXXXXXXXXATIKSFIEESQ 395
N +LK +EL+L KLL+E + EEG D EPR+KVRL+VP+SSC +TIKSFIE+SQ
Sbjct: 92 NEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQ 151
Query: 396 AGIKISPQDNSYAGISDR 449
AGIKISPQDN+Y +DR
Sbjct: 152 AGIKISPQDNNYMASTDR 169
Score = 137 bits (346), Expect = 5e-30
Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Frame = +1
Query: 574 YYIQSMSTPFXXXXXXXXXXXXXXXXX---KFQNHRPHNNKGPGVLQDDRNSNSVTIGVA 744
+Y QSM+ PF +FQN++P + + ++Q++RN NS+TIGV+
Sbjct: 196 HYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKP-DTRSSEIVQEERN-NSLTIGVS 253
Query: 745 DEHIGLVLGRGGRNVIEISQVSGARIKISDRDDFMSGTTDRKVTITGSQRAIRIAEDMIT 924
D HIGLV+GRGGRN++EISQ SGARIKISDR DFMSGTTDRKVTITGSQRAIR AE MI
Sbjct: 254 DGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIL 313
Query: 925 QKVSSATDRV 954
QKV+ A++RV
Sbjct: 314 QKVAYASERV 323
Score = 57.4 bits (137), Expect = 8e-06
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = +3
Query: 39 EKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTV 218
E T R +V ++ G++IGKGGSTI F S A I++S + ++DR++ +SGT+
Sbjct: 118 EPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTI 177
Query: 219 NNVLKGVELILDKL 260
++ +LI+ KL
Sbjct: 178 EEQMRATDLIVSKL 191
>ref|XP_003638170.1| RNA-binding protein Nova-1, partial [Medicago truncatula]
gi|358348273|ref|XP_003638172.1| RNA-binding protein
Nova-1, partial [Medicago truncatula]
gi|355504105|gb|AES85308.1| RNA-binding protein Nova-1,
partial [Medicago truncatula]
gi|355504107|gb|AES85310.1| RNA-binding protein Nova-1,
partial [Medicago truncatula]
Length = 177
Score = 193 bits (491), Expect = 7e-47
Identities = 100/138 (72%), Positives = 114/138 (82%), Gaps = 1/138 (0%)
Frame = +3
Query: 39 EKSTYTRFLVSNAEAGSVIGKGGSTISEFQSQSGARIQLSRNYEFFPGTSDRIIMVSGTV 218
EK TY RFLVSN+ AGSVIGKGGSTI++FQSQSGARIQLSRN EFFPGT+DRIIMVSG +
Sbjct: 33 EKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAI 92
Query: 219 NNVLKGVELILDKLLNEFYLE-EGDAEPRSKVRLVVPNSSCXXXXXXXXATIKSFIEESQ 395
N VL+ VELIL KLL+E + E + D EP++KVRL+VPN SC ATI+SFIEESQ
Sbjct: 93 NEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQ 152
Query: 396 AGIKISPQDNSYAGISDR 449
AGIKISPQDNSY G +DR
Sbjct: 153 AGIKISPQDNSYYGQNDR 170