BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006291
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   135   9e-30
ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric...   135   1e-29
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
gb|ABK94932.1| unknown [Populus trichocarpa]                          134   3e-29
emb|CBI19489.3| unnamed protein product [Vitis vinifera]              134   4e-29

>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  135 bits (341), Expect = 9e-30
 Identities = 82/201 (40%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
 Frame = -2

Query: 828 KLSGKYADAADVLDGDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFSCKVLRDPNGTS 649
           K      +AAD   G       L+V+NLD++I D  LK LF +YG + SCKV+RDPNG S
Sbjct: 301 KFEQSMKEAADKYQG-----ANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVS 355

Query: 648 TGSGLVAFATNKEASRALRAMNGKMILGKTLCITLEKGRKSRPKMLPIPMTAXXXXXXXX 469
            GSG VAF+T +EASRAL  MNGKM+  K L +TL + ++ R   L              
Sbjct: 356 RGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRARLQAQFA--------- 406

Query: 468 XXXXXXXXXXXXXXXXXXTPG--GFGQQMFYGQTAPTLLSPEPGYWYQQQVIRGVTLPAG 295
                              PG  G GQQ+FYGQ  P ++  +PG+ YQQQ++ G+  P G
Sbjct: 407 QMRPVSMPPSVAPRMPMYPPGGPGMGQQIFYGQGPPAIIPSQPGFGYQQQLVPGMR-PGG 465

Query: 294 APMANTFVSQGSQFLPGMRPG 232
           AP+ N FV    Q   G RPG
Sbjct: 466 APVPNFFVPMVQQGQQGQRPG 486



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 33/94 (35%), Positives = 49/94 (52%)
 Frame = -2

Query: 786 GDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFSCKVLRDPNGTSTGSGLVAFATNKEA 607
           GD+     + V+NL E+ TD  LK  F  +G + S  V+RD +G S   G V F +  +A
Sbjct: 207 GDRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDA 266

Query: 606 SRALRAMNGKMILGKTLCITLEKGRKSRPKMLPI 505
           +RA+ A+NGK I  K   +   + +  R   L I
Sbjct: 267 ARAVEALNGKKIDDKEWYVGKAQKKSEREHELKI 300


>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223542114|gb|EEF43658.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 644

 Score =  135 bits (340), Expect = 1e-29
 Identities = 82/201 (40%), Positives = 110/201 (54%), Gaps = 5/201 (2%)
 Frame = -2

Query: 807 DAADVLDGDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFSCKVLRDPNGTSTGSGLVA 628
           +AAD   G       L+++NLD++I D  LK LF  +G + SCKV+RDPNG S GSG VA
Sbjct: 298 EAADKFQG-----ANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVA 352

Query: 627 FATNKEASRALRAMNGKMILGKTLCITLEKGRKSRPKMLPIPMTAXXXXXXXXXXXXXXX 448
           F+T +EAS+AL  MNGKM++ K L + L + ++ R   L    +                
Sbjct: 353 FSTPEEASKALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFS---------QIRPVAM 403

Query: 447 XXXXXXXXXXXTPG--GFGQQMFYGQTAPTLLSPEPGYWYQQQVIRGVTLPAGAPMANTF 274
                       PG  G GQQ+FYGQ  P ++ P+PG+ YQQQ++ G+  P GAPM N F
Sbjct: 404 APSVAPRMPMYPPGGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMR-PGGAPMPNFF 462

Query: 273 VSQGSQFLPGMRPG---AGAS 220
           V    Q   G RPG   AGA+
Sbjct: 463 VPMVQQGQQGQRPGGRRAGAA 483


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  135 bits (339), Expect = 2e-29
 Identities = 82/218 (37%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
 Frame = -2

Query: 849 KLFNRNFKLSGKYA----DAADVLDGDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFS 682
           K + R  +L  ++     +AAD   G       L+++NLD++I D  LK LF  +G + S
Sbjct: 281 KKYEREVELKQRFEQSMKEAADKFQG-----ANLYIKNLDDSIGDEKLKELFSPFGTITS 335

Query: 681 CKVLRDPNGTSTGSGLVAFATNKEASRALRAMNGKMILGKTLCITLEKGRKSR------- 523
           CKV+RDPNG S GSG VAF+T +EASRAL  MNGK+++ K L + L + ++ R       
Sbjct: 336 CKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVALAQRKEDRRARLQAQ 395

Query: 522 -PKMLPIPMTAXXXXXXXXXXXXXXXXXXXXXXXXXXTPGGFGQQMFYGQTAPTLLSPEP 346
             +M P+ M                               G GQQ+FYGQ  P ++ P+P
Sbjct: 396 FSQMRPVAMAPSVGPRMPMYPPAGP---------------GLGQQIFYGQAPPAIIPPQP 440

Query: 345 GYWYQQQVIRGVTLPAGAPMANTFVSQGSQFLPGMRPG 232
           G+ YQQQ++ G+  P GAPM N FV    Q   G RPG
Sbjct: 441 GFGYQQQLVPGMR-PGGAPMPNFFVPMVQQGQQGQRPG 477


>gb|ABK94932.1| unknown [Populus trichocarpa]
          Length = 408

 Score =  134 bits (337), Expect = 3e-29
 Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 12/218 (5%)
 Frame = -2

Query: 849 KLFNRNFKLSGKYA----DAADVLDGDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFS 682
           K + R  +L  ++     +AAD   G       L+++NLD++I D  +K LF  +G + S
Sbjct: 46  KKYEREVELKQRFEQSMKEAADKFQG-----ANLYIKNLDDSIGDEKIKELFSPFGTITS 100

Query: 681 CKVLRDPNGTSTGSGLVAFATNKEASRALRAMNGKMILGKTLCITLEKGRKSR------- 523
           CKV+RDPNG S GSG VAF+T +EASRAL  MNGKM+  K L + L + ++ R       
Sbjct: 101 CKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQ 160

Query: 522 -PKMLPIPMTAXXXXXXXXXXXXXXXXXXXXXXXXXXTPGGFGQQMFYGQTAPTLLSPEP 346
             +M P+ M                               G GQQ+FYGQ  P ++ P+P
Sbjct: 161 FSQMRPVAMAPSVGRMPMYPPTGP----------------GLGQQIFYGQGPPAIMPPQP 204

Query: 345 GYWYQQQVIRGVTLPAGAPMANTFVSQGSQFLPGMRPG 232
           G+ YQQQ++ G+  P GAPM N FV    Q   G RPG
Sbjct: 205 GFGYQQQLVPGMR-PGGAPMPNFFVPMVQQGQQGQRPG 241


>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  134 bits (336), Expect = 4e-29
 Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 2/208 (0%)
 Frame = -2

Query: 849 KLFNRNFKLSGKYADAADVLDGDQVDLKQLHVRNLDEAITDYSLKALFFTYGCLFSCKVL 670
           K + R  +L G++  +   +  D+     L+++NLD++I D  LK LF  +G + SCKV+
Sbjct: 274 KKYERELELKGRFEQSMKEVV-DKFQGVNLYIKNLDDSIGDDKLKELFSEFGTITSCKVM 332

Query: 669 RDPNGTSTGSGLVAFATNKEASRALRAMNGKMILGKTLCITLEKGRKSRPKMLPIPMTAX 490
           RDP+G S GSG VAF+T++EASRAL  MNGKM++ K L + L + ++ R   L    +  
Sbjct: 333 RDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFS-- 390

Query: 489 XXXXXXXXXXXXXXXXXXXXXXXXXTPG--GFGQQMFYGQTAPTLLSPEPGYWYQQQVIR 316
                                     PG  G GQQ+FYGQ  P ++ P+ G+ YQQQ++ 
Sbjct: 391 -------QMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVP 443

Query: 315 GVTLPAGAPMANTFVSQGSQFLPGMRPG 232
           G+  P GAPM N FV    Q   G RPG
Sbjct: 444 GMR-PGGAPMPNFFVPLVQQGQQGQRPG 470