BLASTX nr result

ID: Cnidium21_contig00006255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006255
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267865.2| PREDICTED: glutamate synthase 1 [NADH], chlo...   587   e-165
ref|XP_002513554.1| glutamate synthase, putative [Ricinus commun...   584   e-164
ref|XP_002321436.1| predicted protein [Populus trichocarpa] gi|2...   581   e-163
ref|XP_002332732.1| predicted protein [Populus trichocarpa] gi|2...   575   e-162
ref|XP_002864244.1| NADH-dependent glutamate synthase 1 gene [Ar...   550   e-154

>ref|XP_002267865.2| PREDICTED: glutamate synthase 1 [NADH], chloroplastic-like [Vitis
            vinifera] gi|302144040|emb|CBI23145.3| unnamed protein
            product [Vitis vinifera]
          Length = 2216

 Score =  587 bits (1514), Expect = e-165
 Identities = 289/348 (83%), Positives = 316/348 (90%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1032 QLNV--LSRVGVKTKAKS--KSSGFVLEKNRFYGTRLRGSGQERHHLWQSDGPGRAPKLK 865
            Q NV  LSR   K+K  S   S    + +N+F GTRLRG G ER H WQSDGPGR+PKL+
Sbjct: 33   QFNVTPLSRFNNKSKGSSCYVSKRTNVVENKFLGTRLRGCGSERLHFWQSDGPGRSPKLR 92

Query: 864  VVVKSSMSQVPEKPLGLYDSAFDKDSCGVGFVAELSGESSRKTVTDAIEMLVRMAHRGAC 685
            VVV+S++SQVPEKPLGLYD +FDKDSCGVGFVAELSGESSRKTVTDA+EMLVRM+HRGAC
Sbjct: 93   VVVRSALSQVPEKPLGLYDPSFDKDSCGVGFVAELSGESSRKTVTDAVEMLVRMSHRGAC 152

Query: 684  GCEANTGDGAGILVGLPHDFYKEVAKDVGFELPPFGEYAVGMFFLPTSESRREQSKIVFA 505
            GCE NTGDGAGILVGLPHDF+KEVA+DVGFELPP GEYAVGMFFLPTS +RRE+SK VF 
Sbjct: 153  GCETNTGDGAGILVGLPHDFFKEVAQDVGFELPPPGEYAVGMFFLPTSHTRREESKNVFT 212

Query: 504  KVAESLGHTVLGWRPVPTDNSGLGPSTLQTEPVIEQVFLTPTPRSEADFEQQLYILRRVS 325
            KVAESLGHTVLGWR VPT+NSGLG S LQTEPV+EQVFLTPTPRS+ADFEQQ+YILRRVS
Sbjct: 213  KVAESLGHTVLGWRSVPTNNSGLGNSALQTEPVVEQVFLTPTPRSKADFEQQMYILRRVS 272

Query: 324  MVAIRAALNLQHGSVKDFYICSLSSRTIVYKGQLKPNQLKEYYYADLGNQRFTSYMALVH 145
            MVAIRAALNLQHG V+DFYICSLSSRT+VYKGQLKP+Q+K YYYADLGN+RFTSYMAL+H
Sbjct: 273  MVAIRAALNLQHGGVRDFYICSLSSRTVVYKGQLKPDQVKGYYYADLGNERFTSYMALIH 332

Query: 144  SRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCREL 1
            SRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKC+EL
Sbjct: 333  SRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKEL 380


>ref|XP_002513554.1| glutamate synthase, putative [Ricinus communis]
            gi|223547462|gb|EEF48957.1| glutamate synthase, putative
            [Ricinus communis]
          Length = 2215

 Score =  584 bits (1505), Expect = e-164
 Identities = 286/374 (76%), Positives = 331/374 (88%), Gaps = 4/374 (1%)
 Frame = -2

Query: 1110 AQNSIFQPKPTSNLCSITKTKALVNPQLNVLSRVGVKTKAKSKSS----GFVLEKNRFYG 943
            + +S+ QP+  +NL +ITK    ++P+LNV++ +  +T   ++ S      VL+K + +G
Sbjct: 6    SSSSLLQPRRGANL-NITKQPCSISPKLNVIAPISRRTSRPTRCSVTKKSAVLDK-KIFG 63

Query: 942  TRLRGSGQERHHLWQSDGPGRAPKLKVVVKSSMSQVPEKPLGLYDSAFDKDSCGVGFVAE 763
            TRLR +G ER H WQSDGPG +PKL+V+V+S++S VPEKPLGLYD +FDKDSCGVGFVAE
Sbjct: 64   TRLRAAGTERLHFWQSDGPGCSPKLRVMVRSALSGVPEKPLGLYDPSFDKDSCGVGFVAE 123

Query: 762  LSGESSRKTVTDAIEMLVRMAHRGACGCEANTGDGAGILVGLPHDFYKEVAKDVGFELPP 583
            LSGE+SRKTVTDA+EML+RM+HRGACGCE NTGDGAGILV LPHDFYKEVAK+ GFELP 
Sbjct: 124  LSGENSRKTVTDALEMLIRMSHRGACGCETNTGDGAGILVALPHDFYKEVAKESGFELPG 183

Query: 582  FGEYAVGMFFLPTSESRREQSKIVFAKVAESLGHTVLGWRPVPTDNSGLGPSTLQTEPVI 403
             GEYAVGMFFLPTS++RRE+SK VF KVAESLGHTVLGWR VPTDNSGLG + LQTEPV+
Sbjct: 184  PGEYAVGMFFLPTSDNRREESKNVFTKVAESLGHTVLGWRRVPTDNSGLGNAALQTEPVV 243

Query: 402  EQVFLTPTPRSEADFEQQLYILRRVSMVAIRAALNLQHGSVKDFYICSLSSRTIVYKGQL 223
            EQVFLTP+PRS+ADFEQQ+YILRRVSMVAIRAALNLQHG V+DFYICSLSSRTIVYKGQL
Sbjct: 244  EQVFLTPSPRSKADFEQQMYILRRVSMVAIRAALNLQHGGVRDFYICSLSSRTIVYKGQL 303

Query: 222  KPNQLKEYYYADLGNQRFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN 43
            KP Q+K+YYYADLGN+RFTSYMAL+HSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN
Sbjct: 304  KPVQVKDYYYADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN 363

Query: 42   WMKAREGLLKCREL 1
            WMKAREGLLKC+EL
Sbjct: 364  WMKAREGLLKCKEL 377


>ref|XP_002321436.1| predicted protein [Populus trichocarpa] gi|222868432|gb|EEF05563.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  581 bits (1498), Expect = e-163
 Identities = 290/382 (75%), Positives = 323/382 (84%), Gaps = 9/382 (2%)
 Frame = -2

Query: 1119 MSLAQNS--IFQPKPTSNLCSITKTKALVNPQLNVLSRVGVKTKAK------SKSSGFVL 964
            MS A +S  + QPK      S     + ++P LNV +   V  ++       S     V+
Sbjct: 1    MSAAASSGALLQPKSVKAPFSSLSKSSSLSPSLNVATAASVSRRSARANRCASTRKSVVV 60

Query: 963  EKNRFYGTRLRGS-GQERHHLWQSDGPGRAPKLKVVVKSSMSQVPEKPLGLYDSAFDKDS 787
            E+  F G+++RGS G ER H WQSDGPGR PKL+VVV+S++S VPEKPLGLYD +FDKDS
Sbjct: 61   ERKSFLGSKVRGSAGSERLHFWQSDGPGREPKLRVVVRSALSGVPEKPLGLYDPSFDKDS 120

Query: 786  CGVGFVAELSGESSRKTVTDAIEMLVRMAHRGACGCEANTGDGAGILVGLPHDFYKEVAK 607
            CGVGFVAELSG+SSRKTV DA+EMLVRM HRGACGCE NTGDGAGILV LPHDFYKEVAK
Sbjct: 121  CGVGFVAELSGDSSRKTVNDALEMLVRMTHRGACGCETNTGDGAGILVALPHDFYKEVAK 180

Query: 606  DVGFELPPFGEYAVGMFFLPTSESRREQSKIVFAKVAESLGHTVLGWRPVPTDNSGLGPS 427
            D+GFELPP GEYAVGMFFLPTS++R+E+SK VF KVAESLGHTVLGWRPVPTDNSGLG S
Sbjct: 181  DIGFELPPPGEYAVGMFFLPTSDNRKEESKNVFTKVAESLGHTVLGWRPVPTDNSGLGNS 240

Query: 426  TLQTEPVIEQVFLTPTPRSEADFEQQLYILRRVSMVAIRAALNLQHGSVKDFYICSLSSR 247
             LQTEPVIEQVFLT TPRS+ADFEQQ+YILRRVSMVAIRAALNLQ+G V+DFYICSLSSR
Sbjct: 241  ALQTEPVIEQVFLTATPRSKADFEQQMYILRRVSMVAIRAALNLQYGGVRDFYICSLSSR 300

Query: 246  TIVYKGQLKPNQLKEYYYADLGNQRFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEI 67
            T+VYKGQLKP QLK YYYADLGN+RFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEI
Sbjct: 301  TVVYKGQLKPEQLKGYYYADLGNERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEI 360

Query: 66   NTLRGNVNWMKAREGLLKCREL 1
            NTLRGNVNWMKAREGL+KC+EL
Sbjct: 361  NTLRGNVNWMKAREGLIKCKEL 382


>ref|XP_002332732.1| predicted protein [Populus trichocarpa] gi|222837542|gb|EEE75907.1|
            predicted protein [Populus trichocarpa]
          Length = 2230

 Score =  575 bits (1483), Expect = e-162
 Identities = 285/378 (75%), Positives = 325/378 (85%), Gaps = 8/378 (2%)
 Frame = -2

Query: 1110 AQNSIFQPKPT-SNLCSITKTKALV-NPQLNVLS------RVGVKTKAKSKSSGFVLEKN 955
            + ++I QPK   S++ S+ K+ + V +P LNV +      R G  T+  S  +  V+E+ 
Sbjct: 7    SSSAILQPKSVKSSISSLNKSSSCVFSPSLNVATAASISRRRGRATRCVSARNSAVVERK 66

Query: 954  RFYGTRLRGSGQERHHLWQSDGPGRAPKLKVVVKSSMSQVPEKPLGLYDSAFDKDSCGVG 775
             F G+++RGS  ER H W S+GPGR PKL+VVV+S++S VPEKPLGLYD +FDKDSCGVG
Sbjct: 67   SFLGSKVRGSPSERLHFWLSEGPGREPKLRVVVRSALSGVPEKPLGLYDPSFDKDSCGVG 126

Query: 774  FVAELSGESSRKTVTDAIEMLVRMAHRGACGCEANTGDGAGILVGLPHDFYKEVAKDVGF 595
            FVAELSGE+SRKTV DA+EM VRMAHRGACGCE NTGDGAGILV LPHD+YKEVAKD+GF
Sbjct: 127  FVAELSGENSRKTVNDALEMSVRMAHRGACGCETNTGDGAGILVALPHDYYKEVAKDIGF 186

Query: 594  ELPPFGEYAVGMFFLPTSESRREQSKIVFAKVAESLGHTVLGWRPVPTDNSGLGPSTLQT 415
            ELPP GEYAVGMFFLPTS++RRE+SK VF KVAESLGHTVLGWRPVPTDNS LG + LQT
Sbjct: 187  ELPPSGEYAVGMFFLPTSDNRREESKNVFTKVAESLGHTVLGWRPVPTDNSALGNAALQT 246

Query: 414  EPVIEQVFLTPTPRSEADFEQQLYILRRVSMVAIRAALNLQHGSVKDFYICSLSSRTIVY 235
            EPVIEQVFLT TPRS+ADFE+Q+YILRRVSMVAI AALNLQ+G VKDFYICSLSSRT+VY
Sbjct: 247  EPVIEQVFLTATPRSKADFEKQMYILRRVSMVAITAALNLQYGGVKDFYICSLSSRTVVY 306

Query: 234  KGQLKPNQLKEYYYADLGNQRFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLR 55
            KGQLKP+QLK YYYADLGN+ FTSYMA+VHSRFSTNTFPSWDRAQPMRVLGHNGEINTLR
Sbjct: 307  KGQLKPDQLKAYYYADLGNETFTSYMAMVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLR 366

Query: 54   GNVNWMKAREGLLKCREL 1
            GNVNWMKAREGLLKC+EL
Sbjct: 367  GNVNWMKAREGLLKCKEL 384


>ref|XP_002864244.1| NADH-dependent glutamate synthase 1 gene [Arabidopsis lyrata subsp.
            lyrata] gi|297310079|gb|EFH40503.1| NADH-dependent
            glutamate synthase 1 gene [Arabidopsis lyrata subsp.
            lyrata]
          Length = 2207

 Score =  550 bits (1416), Expect = e-154
 Identities = 275/374 (73%), Positives = 312/374 (83%), Gaps = 4/374 (1%)
 Frame = -2

Query: 1110 AQNSIFQPKPTSNLCSIT--KTKALVNPQLNVLSRVGVKTKAKSKSSGF--VLEKNRFYG 943
            + +S+   +    L S+   K    V  QL V S V  +    ++ S    V  ++ F G
Sbjct: 5    SSSSVLNLRTNQQLLSLRSLKNSTSVASQLAVTSGVSRRRSCTARCSVKKPVAPESPFLG 64

Query: 942  TRLRGSGQERHHLWQSDGPGRAPKLKVVVKSSMSQVPEKPLGLYDSAFDKDSCGVGFVAE 763
            TR+R SG E    W+SDGPGR+ KL+ VVKSS S VPEKPLGLYD ++DKDSCGVGFVAE
Sbjct: 65   TRVRRSGSETLQFWRSDGPGRSAKLRTVVKSSFSGVPEKPLGLYDPSYDKDSCGVGFVAE 124

Query: 762  LSGESSRKTVTDAIEMLVRMAHRGACGCEANTGDGAGILVGLPHDFYKEVAKDVGFELPP 583
            LSGE+SRKTVTD++EML+RM HRGACGCE+NTGDGAGILVGLPHDFY E A ++GF LPP
Sbjct: 125  LSGETSRKTVTDSLEMLIRMTHRGACGCESNTGDGAGILVGLPHDFYAEAATELGFVLPP 184

Query: 582  FGEYAVGMFFLPTSESRREQSKIVFAKVAESLGHTVLGWRPVPTDNSGLGPSTLQTEPVI 403
             G+YAVGMFFLPT ESRRE+SK VF KVAESLGH+VLGWR VPTDNSGLG S LQTEP+I
Sbjct: 185  AGKYAVGMFFLPTVESRREESKNVFTKVAESLGHSVLGWRLVPTDNSGLGNSALQTEPII 244

Query: 402  EQVFLTPTPRSEADFEQQLYILRRVSMVAIRAALNLQHGSVKDFYICSLSSRTIVYKGQL 223
             QVFLTPT +S+ADFEQQ+YILRRVSMVAIRAALNLQHG++KDFYICSLSSRTIVYKGQL
Sbjct: 245  AQVFLTPTTKSKADFEQQMYILRRVSMVAIRAALNLQHGAMKDFYICSLSSRTIVYKGQL 304

Query: 222  KPNQLKEYYYADLGNQRFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN 43
            KP+QLK+YYYADLG++RFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN
Sbjct: 305  KPDQLKDYYYADLGSERFTSYMALVHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVN 364

Query: 42   WMKAREGLLKCREL 1
            WM+AREGLLKC EL
Sbjct: 365  WMRAREGLLKCNEL 378


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