BLASTX nr result
ID: Cnidium21_contig00006252
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00006252
(1305 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin... 461 e-127
ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi... 458 e-126
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max] 457 e-126
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera... 446 e-123
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2... 440 e-121
>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
gi|255639315|gb|ACU19955.1| unknown [Glycine max]
Length = 331
Score = 461 bits (1186), Expect = e-127
Identities = 234/337 (69%), Positives = 274/337 (81%), Gaps = 2/337 (0%)
Frame = +2
Query: 23 IGSAVKRTPKSGRQSLFYQDLASPITGSRRSGSKFSTPGQAAAVSALWKENFANSDLPPP 202
+ + V+RTP+S RQSLF+QDLASP++ R KFS+P QAAAVS+LW+ENF +SDLPPP
Sbjct: 1 MSTTVQRTPRSSRQSLFFQDLASPVSARR---GKFSSPSQAAAVSSLWRENFGSSDLPPP 57
Query: 203 PMFTLEDRSDFSPDSGIQDYPISPEAKSDPRSPFQSSGKDLSTP-KSKSEASTSYALMGG 379
P+FTLEDRSDFSP+SGI DY ISPE KSD R+P Q+S K+ STP KSKSEASTSYAL G
Sbjct: 58 PVFTLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYALRGV 117
Query: 380 QSQNRQSPVGSLSWWSPSKGSGSADQDDKGRGSGSPVDGVVQPGALITLPPPREVARPEV 559
Q + SP LSWWSP+ +QD++GR S PV+GVVQPGALITLPPP EVARPEV
Sbjct: 118 QQNQQGSP--GLSWWSPTTAKSGGEQDERGRSS--PVEGVVQPGALITLPPPLEVARPEV 173
Query: 560 QRNSVVVGPLDEEEWVTVYGFLPVDTNLVLREFEKCGIILKHVPGPRDANWMNILYQNRA 739
QRNS+ G L+EEEWVTVYGF P DTN+VLREFEKCG ILKHVPGPRDANWM+ILYQNR+
Sbjct: 174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRS 233
Query: 740 DARKALAKNGMQINGVLIIGVKPVDPMQRQTLNEKLNKQGFMPLPPPAARNSNLISLRS- 916
DA KAL KNGMQINGVLI+GVK +DPMQRQ LNE+L QGFMPLP P+ARNS + SL++
Sbjct: 234 DAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLPSARNSEVSSLKAP 293
Query: 917 SQNQYANNGINGARQSSGTIATPAKSLASKVMDVMFG 1027
S+ Y NG + ARQ+ GTIA+P KSL SK+MD+MFG
Sbjct: 294 SRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFG 330
>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
[Ricinus communis]
Length = 332
Score = 458 bits (1178), Expect = e-126
Identities = 239/339 (70%), Positives = 281/339 (82%), Gaps = 4/339 (1%)
Frame = +2
Query: 23 IGSAVKRTPKS-GRQSLFYQDLASPITGSRRSGSKFSTPGQAAAVSALWKENFANSDLPP 199
+ + V RTPKS G +SLFYQDLASP+ S R G KF+TPGQAAAVSALW+ENF SDLPP
Sbjct: 1 MSTLVNRTPKSSGSRSLFYQDLASPV--SARKG-KFATPGQAAAVSALWRENFGGSDLPP 57
Query: 200 PPMFTLEDRSDFSPDSGIQDYPISPEAKSDPRSPFQSSGKDLSTP-KSKSEASTSYALMG 376
PPM+TLEDRSDFSP+SGI DYP+SPE KSDPRSP Q SG++ P KSKS+ASTS+ALM
Sbjct: 58 PPMYTLEDRSDFSPESGIPDYPVSPEVKSDPRSPRQISGREFMIPSKSKSDASTSFALMN 117
Query: 377 GQSQNRQSPVGSLSWWSPSKGSGSADQDDKGRGSGSPVDGVVQPGALITLPPPREVARPE 556
G QN+Q S +WWSP+K S S++Q+DKG+GS PV+GVVQPGALI LPP REVARPE
Sbjct: 118 GH-QNQQGSASS-TWWSPAKAS-SSEQEDKGKGS--PVEGVVQPGALIILPPLREVARPE 172
Query: 557 VQRNSVVVGPLDEEEWVTVYGFLPVDTNLVLREFEKCGIILKHVPGPRDANWMNILYQNR 736
+QRN++ G DEEEWVTVYGF P DTNLVLREFEKCG+ILKHVPGPRDANWM+ILYQ+R
Sbjct: 173 MQRNNLPTGKFDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWMHILYQSR 232
Query: 737 ADARKALAKNGMQINGVLIIGVKPVDPMQRQTLNEKLNKQGFMPLPPP-AARNSNLISLR 913
+DA+KAL+KNGMQINGVLI+GVKPVDPMQRQ LNE+LN QGFM LPPP ++R+S L +L
Sbjct: 233 SDAQKALSKNGMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSRSSELKTLG 292
Query: 914 SSQNQY-ANNGINGARQSSGTIATPAKSLASKVMDVMFG 1027
+S Y NG + ARQS G+IA+PAKS+ SK+ DVMFG
Sbjct: 293 ASSRPYHIQNGSSSARQSGGSIASPAKSVVSKIFDVMFG 331
>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
Length = 331
Score = 457 bits (1177), Expect = e-126
Identities = 233/337 (69%), Positives = 274/337 (81%), Gaps = 2/337 (0%)
Frame = +2
Query: 23 IGSAVKRTPKSGRQSLFYQDLASPITGSRRSGSKFSTPGQAAAVSALWKENFANSDLPPP 202
+ + V+RTP+S R SLF+QDLASP++ R KFS+PGQAAAVS+LW+ENF +SDLPPP
Sbjct: 1 MSTTVQRTPRSSRHSLFFQDLASPVSARR---GKFSSPGQAAAVSSLWRENFGSSDLPPP 57
Query: 203 PMFTLEDRSDFSPDSGIQDYPISPEAKSDPRSPFQSSGKDLSTP-KSKSEASTSYALMGG 379
P+FTLEDRSDFSP+SGI DY ISPEAKSD R+P Q+S K+ STP KSKSEASTSYAL G
Sbjct: 58 PVFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYALRGV 117
Query: 380 QSQNRQSPVGSLSWWSPSKGSGSADQDDKGRGSGSPVDGVVQPGALITLPPPREVARPEV 559
Q + SP LSWWSP+ +QD+KGR S PV+GVVQPGALITLPPP EVARPEV
Sbjct: 118 QQNQQGSP--GLSWWSPTTAKSVGEQDEKGRSS--PVEGVVQPGALITLPPPLEVARPEV 173
Query: 560 QRNSVVVGPLDEEEWVTVYGFLPVDTNLVLREFEKCGIILKHVPGPRDANWMNILYQNRA 739
QRNS+ G L+EEEWVTVYGF P DTN+VLREFEKCG ILKHVPGPRDANW++ILYQNR+
Sbjct: 174 QRNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRS 233
Query: 740 DARKALAKNGMQINGVLIIGVKPVDPMQRQTLNEKLNKQGFMPLPPPAARNSNLISLRS- 916
DA KAL KNGMQINGVLI+GVK +DPMQRQ LNE+L QGFMPLP +ARNS + +L++
Sbjct: 234 DAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLASARNSEVSTLKAP 293
Query: 917 SQNQYANNGINGARQSSGTIATPAKSLASKVMDVMFG 1027
S+ Y NG + ARQ+ GTIA+P KSL SK+MD+MFG
Sbjct: 294 SRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFG 330
>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
gi|297743215|emb|CBI36082.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 446 bits (1147), Expect = e-123
Identities = 230/337 (68%), Positives = 268/337 (79%), Gaps = 2/337 (0%)
Frame = +2
Query: 23 IGSAVKRTPKSGRQSLFYQDLASPITGSRRSGSKFSTPGQAAAVSALWKENFANSDLPPP 202
+ + V+RTP+SGRQSLF+QDLASP++ R KF++ GQAAAVSALW +NFA SDLPPP
Sbjct: 1 MSTTVQRTPRSGRQSLFFQDLASPVSSRR---GKFTSSGQAAAVSALWHDNFAGSDLPPP 57
Query: 203 PMFTLEDRSDFSPDSGIQDYPISPEAKSDPRSPFQSSGKDLSTP-KSKSEASTSYALMGG 379
PM+TLEDRSDFSP+SGI DYP+SPE KSD R+P SG+D TP K KSEASTS A
Sbjct: 58 PMYTLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSA---- 113
Query: 380 QSQNRQSPVGSLSWWSPSKGSGSADQDDKGRGSGSPVDGVVQPGALITLPPPREVARPEV 559
SLSWWSP+K G DQ++KG+GS PV+GVVQPGALITLPPPREVARPE+
Sbjct: 114 ----------SLSWWSPAKSGG--DQEEKGKGS--PVEGVVQPGALITLPPPREVARPEM 159
Query: 560 QRNSVVVGPLDEEEWVTVYGFLPVDTNLVLREFEKCGIILKHVPGPRDANWMNILYQNRA 739
QRN + G LDEEEWVTVYGF P DTNLVLREFEKCG+ILKHVPGPRDANW++ILYQNR+
Sbjct: 160 QRNCLPAGNLDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRS 219
Query: 740 DARKALAKNGMQINGVLIIGVKPVDPMQRQTLNEKLNKQGFMPLPPPA-ARNSNLISLRS 916
DA+KAL+KNGMQINGVLI+GVKP+DPMQRQ LNE+LN QGFM LPPPA +R+ LR
Sbjct: 220 DAQKALSKNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRV 279
Query: 917 SQNQYANNGINGARQSSGTIATPAKSLASKVMDVMFG 1027
S Y + ARQSSG IA+PAKS+ SK+MD+MFG
Sbjct: 280 SPRPYYLQNGSNARQSSGAIASPAKSVVSKIMDLMFG 316
>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
predicted protein [Populus trichocarpa]
Length = 329
Score = 440 bits (1132), Expect = e-121
Identities = 224/329 (68%), Positives = 265/329 (80%), Gaps = 4/329 (1%)
Frame = +2
Query: 53 SGRQSLFYQDLASPITGSRRSGSKFSTPGQAAAVSALWKENFANSDLPPPPMFTLEDRSD 232
SGRQSLF+QDLASP++ + KFSTP QAAAVSALW++NF SDLPPPP +TLEDRS+
Sbjct: 8 SGRQSLFFQDLASPVSAGK---GKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLEDRSE 64
Query: 233 FSPDSGIQDYPISPEAKSDPR-SPFQSSGKDLSTP-KSKSEASTSYALMGGQSQNRQSPV 406
SP+SGI DYP+SP+ KS P SPFQSSG++ TP K+KSEA+TS+AL+ GQ+ + SP+
Sbjct: 65 ISPESGIPDYPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFALISGQNTQQGSPI 124
Query: 407 GSLSWWSPSKGSGSADQDDKGRGSGSPVDGVVQPGALITLPPPREVARPEVQRNSVVVGP 586
+ WWSPSK S +D +G GSPV+GVVQPGALITLPPPREVARPE RN V G
Sbjct: 125 ST--WWSPSKARSSEHED---KGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGN 179
Query: 587 LDEEEWVTVYGFLPVDTNLVLREFEKCGIILKHVPGPRDANWMNILYQNRADARKALAKN 766
LDEEEWVTVYGF P DTNLVLREFEKCG+ILKHVPGPR+ANWM+ILYQ+RADA+KAL+KN
Sbjct: 180 LDEEEWVTVYGFAPGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKN 239
Query: 767 GMQINGVLIIGVKPVDPMQRQTLNEKLNKQGFMPLPPPAA-RNSNLISLRSS-QNQYANN 940
GMQINGVLIIGVK VDPMQRQ LNE++N QGFM LPPP++ R + +LR+S + Y N
Sbjct: 240 GMQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPDSNALRASPRPHYLQN 299
Query: 941 GINGARQSSGTIATPAKSLASKVMDVMFG 1027
G ARQS G IA+PAKS+ SK+ DVMFG
Sbjct: 300 GSTSARQSGGVIASPAKSMVSKIFDVMFG 328