BLASTX nr result

ID: Cnidium21_contig00006231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006231
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]    59   6e-07
emb|CBI26414.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...    57   2e-06
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...    56   3e-06

>emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]
          Length = 806

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
 Frame = -3

Query: 196 NYCN----ISLKETIVWFHLFTGLGGMHLVLFRVEGHHRLPPTTLSP 68
           +YCN      + + +    +FTGLGGMHLVLF+VEG+HRLPPTTLSP
Sbjct: 315 SYCNNRVHFLVNDLMFTRAVFTGLGGMHLVLFKVEGNHRLPPTTLSP 361


>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = -3

Query: 190 CNISLKETIVWFHLFTGLGGMHLVLFRVEGHHRLPPTTLSP 68
           CN++   T      F GLGGMHLVLF+VEG+HRLPPTTLSP
Sbjct: 152 CNLNAVST------FIGLGGMHLVLFKVEGNHRLPPTTLSP 186


>ref|XP_002319231.1| predicted protein [Populus trichocarpa] gi|222857607|gb|EEE95154.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 145 TGLGGMHLVLFRVEGHHRLPPTTLSP 68
           TGLGGMHLVLFRVEG+HRLPPTTLSP
Sbjct: 161 TGLGGMHLVLFRVEGNHRLPPTTLSP 186


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = -3

Query: 190 CNISLKETIVWFHLFTGLGGMHLVLFRVEGHHRLPPTTLSP 68
           CN++   T      F GLGGMHLVLF+VEG+HRLPPTTLSP
Sbjct: 316 CNLNAVST------FIGLGGMHLVLFKVEGNHRLPPTTLSP 350


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
           gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
           protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/41 (68%), Positives = 30/41 (73%)
 Frame = -3

Query: 190 CNISLKETIVWFHLFTGLGGMHLVLFRVEGHHRLPPTTLSP 68
           CN++   T       TGLGGMHLVLFRVEG HRLPPTTLSP
Sbjct: 320 CNLNAVSTS------TGLGGMHLVLFRVEGSHRLPPTTLSP 354


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