BLASTX nr result

ID: Cnidium21_contig00006219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006219
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_182179.3| transducin family protein / WD-40 repeat family...    79   3e-13
gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana]             79   3e-13
ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...    74   1e-11
ref|XP_002882076.1| transducin family protein [Arabidopsis lyrat...    73   3e-11
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09

>ref|NP_182179.3| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana] gi|330255627|gb|AEC10721.1|
           transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
          Length = 2513

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/86 (45%), Positives = 51/86 (59%)
 Frame = -3

Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80
           + LPL+ ++SE +PP P+RS+S IDWLPDF             +VISHLP    S   G 
Sbjct: 25  DHLPLRQLRSEIVPPAPTRSQSSIDWLPDFANYSWLAYGASTLVVISHLP----SPLRGE 80

Query: 79  GPVPGPIFRQVFDLGGGVVSAVCWSP 2
               GP FRQ+ ++ G  V+AVCWSP
Sbjct: 81  DSTNGPFFRQILEVSGEPVTAVCWSP 106


>gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana]
          Length = 2480

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/86 (45%), Positives = 51/86 (59%)
 Frame = -3

Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80
           + LPL+ ++SE +PP P+RS+S IDWLPDF             +VISHLP    S   G 
Sbjct: 25  DHLPLRQLRSEIVPPAPTRSQSSIDWLPDFANYSWLAYGASTLVVISHLP----SPLRGE 80

Query: 79  GPVPGPIFRQVFDLGGGVVSAVCWSP 2
               GP FRQ+ ++ G  V+AVCWSP
Sbjct: 81  DSTNGPFFRQILEVSGEPVTAVCWSP 106


>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223537408|gb|EEF39036.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 2299

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/88 (50%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
 Frame = -3

Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80
           + LPL +I SE IPP P+RSES IDWLPDF             LVISHLP   SSD    
Sbjct: 15  DHLPLSIIGSEIIPPAPTRSESTIDWLPDFSGYAWIAYGASSLLVISHLPSPMSSDEF-- 72

Query: 79  GPVPGPIFRQVFDLGG---GVVSAVCWS 5
             + GPI RQVF+L G     V++V WS
Sbjct: 73  --LIGPILRQVFELSGDHSSAVTSVSWS 98


>ref|XP_002882076.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327915|gb|EFH58335.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2458

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80
           + LPL+ I+SE +PP P+RS+S IDWLPDF             LVISHLP    S   G 
Sbjct: 21  DNLPLRQIRSEIVPPAPNRSQSSIDWLPDFAGYSWLAYGASTLLVISHLP----SPLRGE 76

Query: 79  GPVPGPIFRQVFDLGGGV---VSAVCWSP 2
               GP FRQ+ ++ G V   V++V WSP
Sbjct: 77  DSTNGPFFRQILEVSGDVSSPVTSVSWSP 105


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
           predicted protein [Populus trichocarpa]
          Length = 2434

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80
           + LPL L +S+ IPP P+RS S IDWLPDF             LVISHLP   S +    
Sbjct: 18  DHLPLSLFRSDIIPPAPTRSASTIDWLPDFSGYSWVAYGASSLLVISHLPSPLSPE---- 73

Query: 79  GPVPGPIFRQVFDLG---GGVVSAVCWSP 2
               GPI +QVF+L       V +V WSP
Sbjct: 74  EAAIGPILQQVFELSSDDSSPVKSVSWSP 102


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