BLASTX nr result
ID: Cnidium21_contig00006219
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00006219 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_182179.3| transducin family protein / WD-40 repeat family... 79 3e-13 gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana] 79 3e-13 ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu... 74 1e-11 ref|XP_002882076.1| transducin family protein [Arabidopsis lyrat... 73 3e-11 ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 >ref|NP_182179.3| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gi|330255627|gb|AEC10721.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] Length = 2513 Score = 79.3 bits (194), Expect = 3e-13 Identities = 39/86 (45%), Positives = 51/86 (59%) Frame = -3 Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80 + LPL+ ++SE +PP P+RS+S IDWLPDF +VISHLP S G Sbjct: 25 DHLPLRQLRSEIVPPAPTRSQSSIDWLPDFANYSWLAYGASTLVVISHLP----SPLRGE 80 Query: 79 GPVPGPIFRQVFDLGGGVVSAVCWSP 2 GP FRQ+ ++ G V+AVCWSP Sbjct: 81 DSTNGPFFRQILEVSGEPVTAVCWSP 106 >gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana] Length = 2480 Score = 79.3 bits (194), Expect = 3e-13 Identities = 39/86 (45%), Positives = 51/86 (59%) Frame = -3 Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80 + LPL+ ++SE +PP P+RS+S IDWLPDF +VISHLP S G Sbjct: 25 DHLPLRQLRSEIVPPAPTRSQSSIDWLPDFANYSWLAYGASTLVVISHLP----SPLRGE 80 Query: 79 GPVPGPIFRQVFDLGGGVVSAVCWSP 2 GP FRQ+ ++ G V+AVCWSP Sbjct: 81 DSTNGPFFRQILEVSGEPVTAVCWSP 106 >ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis] gi|223537408|gb|EEF39036.1| nucleotide binding protein, putative [Ricinus communis] Length = 2299 Score = 74.3 bits (181), Expect = 1e-11 Identities = 44/88 (50%), Positives = 51/88 (57%), Gaps = 3/88 (3%) Frame = -3 Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80 + LPL +I SE IPP P+RSES IDWLPDF LVISHLP SSD Sbjct: 15 DHLPLSIIGSEIIPPAPTRSESTIDWLPDFSGYAWIAYGASSLLVISHLPSPMSSDEF-- 72 Query: 79 GPVPGPIFRQVFDLGG---GVVSAVCWS 5 + GPI RQVF+L G V++V WS Sbjct: 73 --LIGPILRQVFELSGDHSSAVTSVSWS 98 >ref|XP_002882076.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] gi|297327915|gb|EFH58335.1| transducin family protein [Arabidopsis lyrata subsp. lyrata] Length = 2458 Score = 72.8 bits (177), Expect = 3e-11 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 3/89 (3%) Frame = -3 Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80 + LPL+ I+SE +PP P+RS+S IDWLPDF LVISHLP S G Sbjct: 21 DNLPLRQIRSEIVPPAPNRSQSSIDWLPDFAGYSWLAYGASTLLVISHLP----SPLRGE 76 Query: 79 GPVPGPIFRQVFDLGGGV---VSAVCWSP 2 GP FRQ+ ++ G V V++V WSP Sbjct: 77 DSTNGPFFRQILEVSGDVSSPVTSVSWSP 105 >ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1| predicted protein [Populus trichocarpa] Length = 2434 Score = 65.5 bits (158), Expect = 4e-09 Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Frame = -3 Query: 259 EKLPLKLIKSEAIPPCPSRSESCIDWLPDFXXXXXXXXXXXXXLVISHLPITTSSDGHGP 80 + LPL L +S+ IPP P+RS S IDWLPDF LVISHLP S + Sbjct: 18 DHLPLSLFRSDIIPPAPTRSASTIDWLPDFSGYSWVAYGASSLLVISHLPSPLSPE---- 73 Query: 79 GPVPGPIFRQVFDLG---GGVVSAVCWSP 2 GPI +QVF+L V +V WSP Sbjct: 74 EAAIGPILQQVFELSSDDSSPVKSVSWSP 102