BLASTX nr result

ID: Cnidium21_contig00006189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006189
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   130   2e-28
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...   125   8e-27
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   122   6e-26
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   122   8e-26
ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...   120   4e-25

>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score =  130 bits (328), Expect = 2e-28
 Identities = 75/176 (42%), Positives = 98/176 (55%), Gaps = 14/176 (7%)
 Frame = +3

Query: 282 MAFYRNYSSEPVSDGVLDEKGLGPDMEKVDSIAGN--VDGDLSDRDFDINLNAEYRSDGE 455
           MAF+RN+ ++ VS G +++KGLG D   +    GN   DG  S+++FD+NL A+Y SDG 
Sbjct: 1   MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSSEKEFDMNLEAQYESDGG 60

Query: 456 ADDGGKFQQ----DVGDGGTLLDLQPSTRKMTSSGRWGSTFWKDCQPMRP--XXXXXXXX 617
            DD  + Q     D  DG    +LQ S  K ++ GRWGSTFWKDCQP  P          
Sbjct: 61  PDDACRLQNEGTADDRDGLRESNLQASGSKASTVGRWGSTFWKDCQPSCPQNGFESGKES 120

Query: 618 XXXXXFKNGEGSEDESLGVREDRSESEDPD------TVRRRQADVPVDEMLSDDYY 767
                +KN  GSED S+     R +SED D        RR  +DVP +EMLSD+YY
Sbjct: 121 KSGSDYKNAGGSEDNSVDGETGRLDSEDDDGQKEVGKGRRSHSDVPAEEMLSDEYY 176


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score =  125 bits (315), Expect = 8e-27
 Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
 Frame = +3

Query: 282 MAFYRNYSSEPVSDGVLDEKGLGPDMEKVDSIAGN--VDGDLSDRDFDINLNAEYRSDGE 455
           MAF+RNYS+E V+  VLDEKG G ++++V S   N  VD   S++DF+  ++ +Y+SDG+
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQSDGD 60

Query: 456 ADDGGKFQQDVGD---GGTLLDLQPSTRKMTSSGRWGSTFWKDCQPMRPXXXXXXXXXXX 626
            +D G   +       G  + +LQPS R+   +G+WGSTFWKDCQPM             
Sbjct: 61  TNDAGLQNEAAAADDIGLRISNLQPSGRRTAMAGKWGSTFWKDCQPMGHRNGSESEQDSK 120

Query: 627 XXF--KNGEGSEDESLGVREDRSESEDPDTVRRRQADVPVDEMLSDDYY 767
             F  KN E  ED S       S+  + D V++ Q DVP DEM SDDYY
Sbjct: 121 CRFDCKNEEALEDNS-------SDGREVDKVQKGQNDVPADEMSSDDYY 162


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score =  122 bits (307), Expect = 6e-26
 Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 14/176 (7%)
 Frame = +3

Query: 282 MAFYRNYSSEPVSDGVLDEKGLGPDMEKVDSIAGN--VDGDLSDRDFDINLNAEYRSDGE 455
           MAF+RN+S++ VS GV+++K  G +  +V    GN   D   S+++FD+N+ A+Y SDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE 60

Query: 456 ADDGGKFQ----QDVGDGGTLLDLQPSTRKMTSSGRWGSTFWKDCQPMRP--XXXXXXXX 617
            D   + Q     D GD     +LQ +  K    GRWGSTFWKDC  M P          
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNGSESGQES 120

Query: 618 XXXXXFKNGEGSEDESLGVREDRSESEDPDTVR------RRQADVPVDEMLSDDYY 767
                ++N +GSED SL  R  R +S+D D  +      R  +DVP +EMLSD+YY
Sbjct: 121 KSGSDYRNADGSEDNSLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYY 176


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score =  122 bits (306), Expect = 8e-26
 Identities = 70/176 (39%), Positives = 97/176 (55%), Gaps = 14/176 (7%)
 Frame = +3

Query: 282 MAFYRNYSSEPVSDGVLDEKGLGPDMEKVDSIAGN--VDGDLSDRDFDINLNAEYRSDGE 455
           MAF+RN+S++ VS GV+++K  G +  +V    GN   D   S+++FD+N+ A+Y SDGE
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGE 60

Query: 456 ADDGGKFQ----QDVGDGGTLLDLQPSTRKMTSSGRWGSTFWKDCQPMRP--XXXXXXXX 617
            D   + Q     D GD     +LQ +  K    GRWGSTFWKDC  M P          
Sbjct: 61  PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNGSESGQES 120

Query: 618 XXXXXFKNGEGSEDESLGVREDRSESEDPDTVR------RRQADVPVDEMLSDDYY 767
                ++N +GSED SL  R  R +S+D D  +      R  +DVP +EMLSD+YY
Sbjct: 121 KSGSDYRNADGSEDNSLDGRVVRVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYY 176


>ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 2-like [Cucumis sativus]
          Length = 1761

 Score =  120 bits (300), Expect = 4e-25
 Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 12/174 (6%)
 Frame = +3

Query: 282 MAFYRNYSSEPVSDGVLDEKGLGPDMEKVDSIAGNVDGDL-SDRDFDINLNAEYRSDGEA 458
           MAF+RN+S+EP S GVL++KG G   ++  + AGN + D+ +D++F++N++A Y S G+ 
Sbjct: 1   MAFFRNHSNEPGSHGVLEDKGHGQVTDRTHTSAGNDEEDMGTDKEFNMNMDAPYHSGGQV 60

Query: 459 DDGGKFQQD-VGDGGTLL---DLQPSTRKMTSSGRWGSTFWKDCQPM-RPXXXXXXXXXX 623
           DD  +FQ +   D G  +   +LQ S R+     RWGSTFWKDCQPM             
Sbjct: 61  DDSSRFQNEPAADDGIAMRVSNLQNSGRRTAVGRRWGSTFWKDCQPMIHGGSDSAQESKS 120

Query: 624 XXXFKNGEGSEDESLGVREDRSESEDPDTVR-----RRQADVPV-DEMLSDDYY 767
               ++GEGSED     ++  SE ED D ++     RR  DV   D MLSD+YY
Sbjct: 121 ESDNRSGEGSEDNLSNEKDGGSEFEDDDQIKEGKDQRRYTDVTAEDGMLSDEYY 174


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