BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006171
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...    69   1e-09
ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putat...    50   1e-06
ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane prot...    59   1e-06
ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane prot...    58   2e-06
emb|CBI34480.3| unnamed protein product [Vitis vinifera]               56   6e-06

>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
           gi|222845234|gb|EEE82781.1| inner membrane protein
           [Populus trichocarpa]
          Length = 459

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 59  IRRPMVKKFLGVPIIPVAPATAQQP-AFSFTEALKKYVQAQQRKSLPPASPSNATSLPTE 235
           ++ P VKKFLG+P IPVAPA+   P +F   EALK+ V A+Q     PASP     LP E
Sbjct: 372 LKAPGVKKFLGLPEIPVAPASTTPPSSFDLLEALKQQVAARQE----PASP-----LPVE 422

Query: 236 TAKPTNITKTATSSILSQRIRSLENQV 316
            +    + + + +S+LSQR+RSLE QV
Sbjct: 423 PSSKPGVPRISPASVLSQRLRSLEKQV 449


>ref|XP_002530480.1| cytochrome oxidase biogenesis protein, putative [Ricinus communis]
           gi|223529977|gb|EEF31903.1| cytochrome oxidase
           biogenesis protein, putative [Ricinus communis]
          Length = 423

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +2

Query: 47  FPAVIRRPMVKKFLGVPIIPVAPATA-QQPAFSFTEALKKYVQAQQRKSLPPASPSNATS 223
           +  V++   VKKFLGVP IPVAP +A  Q +FS + ALK+ + A+Q  +   +SPS+   
Sbjct: 346 YGGVLKLHGVKKFLGVPEIPVAPPSATSQSSFSLSSALKRALAAKQEPATSSSSPSD--- 402

Query: 224 LPTETAKPTNITKTATSSILSQRIRSLENQV 316
                              LSQ+I++LE QV
Sbjct: 403 -------------------LSQKIQTLEKQV 414



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 3   VMRVFALVTVPLTMTFPQ 56
           + RVFA +TVPLTM FP+
Sbjct: 313 ISRVFAALTVPLTMGFPK 330


>ref|XP_003542770.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 431

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 3/90 (3%)
 Frame = +2

Query: 56  VIRRPMVKKFLGVPIIPVAPAT---AQQPAFSFTEALKKYVQAQQRKSLPPASPSNATSL 226
           V++ P VKK LG+P IPVAP T   A Q  FS   ALK+   A +         + ++S+
Sbjct: 344 VLKVPGVKKTLGIPEIPVAPPTTTSATQSPFSIFPALKQATSATR---------NGSSSI 394

Query: 227 PTETAKPTNITKTATSSILSQRIRSLENQV 316
           P E +K +N  K +++S++SQR+RSLE QV
Sbjct: 395 PDEASKHSN-KKISSASVISQRLRSLEKQV 423


>ref|XP_003529306.1| PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine
           max]
          Length = 431

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
 Frame = +2

Query: 56  VIRRPMVKKFLGVPIIPVAPAT---AQQPAFSFTEALKKYVQAQQRKSLPPASPSNATSL 226
           V++ P VKK LG+P IPVAP T   A Q  FS   ALK+   +         + +  +S+
Sbjct: 344 VLKVPGVKKTLGIPEIPVAPPTTTSAPQSPFSIFPALKQATSS---------TTNGQSSI 394

Query: 227 PTETAKPTNITKTATSSILSQRIRSLENQV 316
           P E +K +N  K ++SS++SQR+RSLE QV
Sbjct: 395 PEEASKHSN-KKISSSSVISQRLRSLEKQV 423


>emb|CBI34480.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = +2

Query: 59  IRRPMVKKFLGVPIIPVAP---ATAQQPAFSFTEALKKYVQAQQRKSLPPASPSNATSLP 229
           +++P VKK  G+P IPV P    T+   +FS ++ALK +      K+L P  PS+   LP
Sbjct: 343 VKQPAVKKMFGIPEIPVPPPPAKTSPSTSFSLSQALKNF------KALMPKGPSSPPLLP 396

Query: 230 TETAKPTNITKTATSSILSQRIRSLENQV 316
             + +       +++++LSQRIRSLE QV
Sbjct: 397 PSSPR----KPISSTAVLSQRIRSLEKQV 421