BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006160
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   172   1e-40
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   172   1e-40
ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252...   162   1e-37
ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|2...   156   5e-36
ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glyci...   149   8e-34

>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  172 bits (435), Expect = 1e-40
 Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 7/170 (4%)
 Frame = -2

Query: 791 TVYIGNLDERVTDRVLYDILIQAGRVVNLIIPRDRETDRLKGFAFAEYESEEIADYTIRL 612
           +VYIGNLDERV+DRVLYDILIQAGRVV+L IPRD+ETDR KGFAFAEYE+EEIADY ++L
Sbjct: 8   SVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIADYAVKL 67

Query: 611 FSGLVTLYNRTLRFGFSGQD--XXXXXXXXXXXTFNARSQPVPYNDMGLSPHSMRSPPSF 438
           FSGLVTLYNRTL+F  SGQD             +   +  PVP+N+M  S HSM      
Sbjct: 68  FSGLVTLYNRTLKFAISGQDKPSSAAITPTSNSSLEPKPHPVPFNNMENSQHSMGLRTPC 127

Query: 437 NSSAQQANYVQA-----SLNQPNAYRSSRYQGSGDNDRERVFGAALDTIS 303
             +A   NY Q      +L+QPN Y SS+  G   +   RVFGA LD+IS
Sbjct: 128 RLAAHPVNYAQVPASSDTLHQPNRY-SSQLDGHSYDYSRRVFGATLDSIS 176


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  172 bits (435), Expect = 1e-40
 Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 7/170 (4%)
 Frame = -2

Query: 791 TVYIGNLDERVTDRVLYDILIQAGRVVNLIIPRDRETDRLKGFAFAEYESEEIADYTIRL 612
           +VYIGNLDERV+DRVLYDILIQAGRVV+L IPRD+ETDR KGFAFAEYE+EEIADY ++L
Sbjct: 8   SVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEIADYAVKL 67

Query: 611 FSGLVTLYNRTLRFGFSGQD--XXXXXXXXXXXTFNARSQPVPYNDMGLSPHSMRSPPSF 438
           FSGLVTLYNRTL+F  SGQD             +   +  PVP+N+M  S HSM      
Sbjct: 68  FSGLVTLYNRTLKFAISGQDKPSSAAITPTSNSSLEPKPHPVPFNNMENSQHSMGLRTPC 127

Query: 437 NSSAQQANYVQA-----SLNQPNAYRSSRYQGSGDNDRERVFGAALDTIS 303
             +A   NY Q      +L+QPN Y SS+  G   +   RVFGA LD+IS
Sbjct: 128 RLAAHPVNYAQVPASSDTLHQPNRY-SSQLDGHSYDYSRRVFGATLDSIS 176


>ref|XP_002274629.2| PREDICTED: uncharacterized protein LOC100252755 [Vitis vinifera]
           gi|147777236|emb|CAN76637.1| hypothetical protein
           VITISV_010659 [Vitis vinifera]
           gi|296083375|emb|CBI23264.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  162 bits (409), Expect = 1e-37
 Identities = 93/165 (56%), Positives = 110/165 (66%), Gaps = 3/165 (1%)
 Frame = -2

Query: 788 VYIGNLDERVTDRVLYDILIQAGRVVNLIIPRDRETDRLKGFAFAEYESEEIADYTIRLF 609
           VYIGNLDERV++RVLYDILIQ GRVV+L IPRD+ET+R KG+AFAEYE+EEIA+Y ++LF
Sbjct: 9   VYIGNLDERVSERVLYDILIQVGRVVDLYIPRDKETERPKGYAFAEYETEEIAEYAVKLF 68

Query: 608 SGLVTLYNRTLRFGFSGQDXXXXXXXXXXXTFNARSQPVPYNDMGLSPHSMRSPPSFNSS 429
           SGLVTLYNRTL+F  SGQD                   VPYN+M  S HSM        S
Sbjct: 69  SGLVTLYNRTLKFAISGQDKPSPAAI-------TPRHHVPYNNMESSQHSMGLKTPCRLS 121

Query: 428 AQQANYVQAS---LNQPNAYRSSRYQGSGDNDRERVFGAALDTIS 303
           A   N  QAS   L+QPN   SS++ G+  +   RVFGA LD IS
Sbjct: 122 AHPVNNAQASSDVLHQPNR-NSSQHDGNNYDYSRRVFGATLDNIS 165


>ref|XP_002329210.1| predicted protein [Populus trichocarpa] gi|222870991|gb|EEF08122.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  156 bits (395), Expect = 5e-36
 Identities = 93/174 (53%), Positives = 112/174 (64%), Gaps = 9/174 (5%)
 Frame = -2

Query: 797 SRTVYIGNLDERVTDRVLYDILIQAGRVVNLIIPRDRETDRLKGFAFAEYESEEIADYTI 618
           S ++YIGNLDERV+DRVLYDILIQAGRVV+L IPRDRETD+ KG+AFAEYE+EEIADY +
Sbjct: 6   SCSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEIADYAV 65

Query: 617 RLFSGLVTLYNRTLRFGFSGQDXXXXXXXXXXXTF------NARSQPVPYNDMGLSPHSM 456
           +LFSGLVTLYNRTL+F  SGQD                      S PV  N++ +  HSM
Sbjct: 66  KLFSGLVTLYNRTLKFAISGQDKLAQNNLNGVVPVPNSSNRQRPSHPVLINNLEIPNHSM 125

Query: 455 RSPPSFNSSAQQANYVQAS---LNQPNAYRSSRYQGSGDNDRERVFGAALDTIS 303
           R       SA  AN   A     N  N Y S+    S D+DR R+FG+A++ IS
Sbjct: 126 RLSAPSRVSAYPANDSLAPPGVTNLSNGYGSNSNGNSNDSDR-RLFGSAVNAIS 178


>ref|XP_003536377.1| PREDICTED: RNA-binding protein 7-like [Glycine max]
          Length = 186

 Score =  149 bits (376), Expect = 8e-34
 Identities = 86/171 (50%), Positives = 106/171 (61%), Gaps = 8/171 (4%)
 Frame = -2

Query: 791 TVYIGNLDERVTDRVLYDILIQAGRVVNLIIPRDRETDRLKGFAFAEYESEEIADYTIRL 612
           +VYIGNLDERVTDRVLYDILIQAGRVV+L IP+D+E+++ KGFAFAEYE+EEIADY +RL
Sbjct: 8   SVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRL 67

Query: 611 FSGLVTLYNRTLRFGFSGQDXXXXXXXXXXXTFNARSQ-----PVPYNDMGLSPHSMRSP 447
           FSGL+TLYNRTL+F  SG+D             +  SQ     PV  N+     HS R  
Sbjct: 68  FSGLITLYNRTLKFAISGRDKTTSNGSTAITPTSNSSQRPRPYPVSINNSENFQHSARLS 127

Query: 446 PSFNSSAQQANYVQ---ASLNQPNAYRSSRYQGSGDNDRERVFGAALDTIS 303
                S    NY Q   + +   ++   S Y G+      R FGA LD+IS
Sbjct: 128 TPDRFSDHPVNYSQVLPSRVTDQSSGYGSHYSGNNYEYSRRAFGATLDSIS 178