BLASTX nr result
ID: Cnidium21_contig00006127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00006127
(845 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526638.1| Photosystem I reaction center subunit N, chl... 213 4e-53
ref|NP_201209.1| photosystem I reaction center subunit N [Arabid... 211 2e-52
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1... 211 2e-52
gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana ... 210 3e-52
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2... 209 5e-52
>ref|XP_002526638.1| Photosystem I reaction center subunit N, chloroplast precursor,
putative [Ricinus communis] gi|223534030|gb|EEF35750.1|
Photosystem I reaction center subunit N, chloroplast
precursor, putative [Ricinus communis]
Length = 169
Score = 213 bits (542), Expect = 4e-53
Identities = 111/174 (63%), Positives = 128/174 (73%), Gaps = 5/174 (2%)
Frame = +1
Query: 160 MAALNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXXN---MPVIRAQNVKDSDSSQHRN 330
MAA+NSSVLAC+YAISGT + +PVIRAQ K + S+
Sbjct: 1 MAAMNSSVLACNYAISGTASSELSKLASVPSAVFPTVSGPKLPVIRAQRAKPASDSK--- 57
Query: 331 DGSQGRRAALVCLGAALFATAT--SSANAGPIEDALERSKTNKDLNDQKRLATSGANFYR 504
+ GRRAA++CL A LF TA SSANAG IE+ LE+SK NK+LND+KRLATSGANF R
Sbjct: 58 --ADGRRAAMLCLAATLFTTAAAVSSANAGVIEEYLEKSKANKELNDKKRLATSGANFAR 115
Query: 505 AYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDIELECKGKDKYKCGSNVFWKW 666
AYTVQFG+C FP NFTGCQDLA+QKKVPFISDD+ LEC+GKDKYKCGSNVFWKW
Sbjct: 116 AYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 169
>ref|NP_201209.1| photosystem I reaction center subunit N [Arabidopsis thaliana]
gi|1709825|sp|P49107.2|PSAN_ARATH RecName:
Full=Photosystem I reaction center subunit N,
chloroplastic; Short=PSI-N; Flags: Precursor
gi|1237124|gb|AAA93075.1| PSI-N [Arabidopsis thaliana]
gi|10176952|dbj|BAB10272.1| photosystem I reaction
centre subunit psaN precursor [Arabidopsis thaliana]
gi|17065518|gb|AAL32913.1| photosystem I reaction centre
subunit psaN precursor [Arabidopsis thaliana]
gi|20148531|gb|AAM10156.1| photosystem I reaction center
subunit psaN precursor [Arabidopsis thaliana]
gi|332010449|gb|AED97832.1| photosystem I reaction
center subunit N [Arabidopsis thaliana]
Length = 171
Score = 211 bits (537), Expect = 2e-52
Identities = 112/176 (63%), Positives = 129/176 (73%), Gaps = 7/176 (3%)
Frame = +1
Query: 160 MAALNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXXN-----MPVIRAQNVKDSDSSQH 324
MAA+NSSVL CSYAI+G+G MPVI+AQ V D
Sbjct: 1 MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKAQRVVGDDV--- 57
Query: 325 RNDGSQGRRAALVCLGAALFATA--TSSANAGPIEDALERSKTNKDLNDQKRLATSGANF 498
DGS GRR+A+V L A LF+TA ++SANAG I++ LERSKTNK+LND+KRLATSGANF
Sbjct: 58 --DGSNGRRSAMVFLAATLFSTAAVSASANAGVIDEYLERSKTNKELNDKKRLATSGANF 115
Query: 499 YRAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDIELECKGKDKYKCGSNVFWKW 666
RA+TVQFGSC FP NFTGCQDLA+QKKVPFIS+DI LEC+GKDKYKCGSNVFWKW
Sbjct: 116 ARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171
>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
unknown [Populus trichocarpa]
gi|222855698|gb|EEE93245.1| predicted protein [Populus
trichocarpa]
Length = 172
Score = 211 bits (536), Expect = 2e-52
Identities = 112/175 (64%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Frame = +1
Query: 160 MAALNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXX----NMPVIRAQNVKDSDSSQHR 327
MAA+NSSVLAC+YAISGTG +P+IRAQ + +DS + +
Sbjct: 1 MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQAR-ADSKEMK 59
Query: 328 NDGSQGRRAALVCLGAALF--ATATSSANAGPIEDALERSKTNKDLNDQKRLATSGANFY 501
S+GRRAALV L A LF A A +SANAG IED LE+SK NK+LND+KRLATSGANF
Sbjct: 60 --ASEGRRAALVYLAATLFTSAAAAASANAGVIEDYLEKSKANKELNDKKRLATSGANFA 117
Query: 502 RAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDIELECKGKDKYKCGSNVFWKW 666
RAYTVQFG+C FP NFTGCQDLA+QKKVPFIS+D+ LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172
>gb|ACZ72945.1| photosystem I reaction center subunit [Nicotiana tabacum]
Length = 168
Score = 210 bits (535), Expect = 3e-52
Identities = 111/171 (64%), Positives = 127/171 (74%), Gaps = 2/171 (1%)
Frame = +1
Query: 160 MAALNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXXNMPVIRAQNVKDSDSSQHRNDGS 339
MAA+NSSVLACSYA+SG G PVI+AQ K DS ++N
Sbjct: 1 MAAMNSSVLACSYAVSGIGASELTSKHASIASQSVQ-KWPVIKAQQSKVLDSEANKNQA- 58
Query: 340 QGRRAALVCLGAALF--ATATSSANAGPIEDALERSKTNKDLNDQKRLATSGANFYRAYT 513
GRR AL+ L AALF A++ SSANAG I+D LE+SK NK+LND+KRLATSGANF RAYT
Sbjct: 59 -GRRIALLGLAAALFTAASSNSSANAGVIDDYLEKSKANKELNDKKRLATSGANFARAYT 117
Query: 514 VQFGSCNFPYNFTGCQDLARQKKVPFISDDIELECKGKDKYKCGSNVFWKW 666
VQFG+C FP NFTGCQDLA+QKKVPFISDD+ LEC+GKDKYKCGSNVFWKW
Sbjct: 118 VQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 168
>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
predicted protein [Populus trichocarpa]
Length = 172
Score = 209 bits (533), Expect = 5e-52
Identities = 112/175 (64%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Frame = +1
Query: 160 MAALNSSVLACSYAISGTGXXXXXXXXXXXXXXXXXX----NMPVIRAQNVKDSDSSQHR 327
MAA+NSSVLAC+YAISGTG +PVIRAQ + +DS + +
Sbjct: 1 MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTR-ADSREMK 59
Query: 328 NDGSQGRRAALVCLGAALF--ATATSSANAGPIEDALERSKTNKDLNDQKRLATSGANFY 501
S+GRRAA+V L A LF A A SSANAG IE+ LE+SK NK+LND+KRLATSGANF
Sbjct: 60 --ASEGRRAAMVYLAATLFTSAAAASSANAGVIEEYLEKSKANKELNDKKRLATSGANFA 117
Query: 502 RAYTVQFGSCNFPYNFTGCQDLARQKKVPFISDDIELECKGKDKYKCGSNVFWKW 666
RA+TVQFG+C FP NFTGCQDLA+QKKVPFISDD+ LEC+GKDKYKCGSNVFWKW
Sbjct: 118 RAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172