BLASTX nr result

ID: Cnidium21_contig00006117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006117
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|2...    88   5e-25
ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...    82   1e-23
emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]    82   1e-23
emb|CBI16432.3| unnamed protein product [Vitis vinifera]               82   1e-23
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...    86   2e-23

>ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|222841304|gb|EEE78851.1|
           predicted protein [Populus trichocarpa]
          Length = 1078

 Score = 88.2 bits (217), Expect(2) = 5e-25
 Identities = 37/45 (82%), Positives = 43/45 (95%)
 Frame = -2

Query: 135 YGYTASGYGYVQDMPYAYVHEFTRTSMAGKIH*FKGGYTSVWRRL 1
           YGYTASGYG+VQDMPYAY+HEFTRTSMAGKI  FKGGYTS+W+++
Sbjct: 175 YGYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKI 219



 Score = 51.2 bits (121), Expect(2) = 5e-25
 Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
 Frame = -3

Query: 248 QDQVRDSDKIGV---SEIASDLAPLFLETHGFKSIPKSVAF 135
           QD+ +DS +IGV   SE+A+DL P +LE+ GFKS+PKSVA+
Sbjct: 135 QDKAKDSGRIGVHAVSELAADLTPTYLESRGFKSVPKSVAY 175


>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score = 82.4 bits (202), Expect(2) = 1e-23
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -2

Query: 132 GYTASGYGYVQDMPYAYVHEFTRTSMAGKIH*FKGGYTSVWRRL 1
           GYTASGYG+VQDMPYAY+HEFTRTSMAGKI  FKGGY + W++L
Sbjct: 152 GYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYMNFWKKL 195



 Score = 52.0 bits (123), Expect(2) = 1e-23
 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
 Frame = -3

Query: 248 QDQVRDSDKIGV---SEIASDLAPLFLETHGFKSIPKSVA 138
           QD+ +DS +IGV   SEIASDL P FLE  GFKS+PKSVA
Sbjct: 111 QDKAKDSGRIGVHAVSEIASDLTPEFLEARGFKSVPKSVA 150


>emb|CAN80678.1| hypothetical protein VITISV_022712 [Vitis vinifera]
          Length = 2246

 Score = 82.4 bits (202), Expect(2) = 1e-23
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -2

Query: 132 GYTASGYGYVQDMPYAYVHEFTRTSMAGKIH*FKGGYTSVWRRL 1
           GYTASGYG+VQDMPYAY+HEFTRTSMAGKI  FKGGY + W++L
Sbjct: 176 GYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYMNFWKKL 219



 Score = 52.0 bits (123), Expect(2) = 1e-23
 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
 Frame = -3

Query: 248 QDQVRDSDKIGV---SEIASDLAPLFLETHGFKSIPKSVA 138
           QD+ +DS +IGV   SEIASDL P FLE  GFKS+PKSVA
Sbjct: 135 QDKAKDSGRIGVHAVSEIASDLTPEFLEARGFKSVPKSVA 174


>emb|CBI16432.3| unnamed protein product [Vitis vinifera]
          Length = 2221

 Score = 82.4 bits (202), Expect(2) = 1e-23
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -2

Query: 132 GYTASGYGYVQDMPYAYVHEFTRTSMAGKIH*FKGGYTSVWRRL 1
           GYTASGYG+VQDMPYAY+HEFTRTSMAGKI  FKGGY + W++L
Sbjct: 152 GYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYMNFWKKL 195



 Score = 52.0 bits (123), Expect(2) = 1e-23
 Identities = 27/40 (67%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
 Frame = -3

Query: 248 QDQVRDSDKIGV---SEIASDLAPLFLETHGFKSIPKSVA 138
           QD+ +DS +IGV   SEIASDL P FLE  GFKS+PKSVA
Sbjct: 111 QDKAKDSGRIGVHAVSEIASDLTPEFLEARGFKSVPKSVA 150


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
           gi|355486526|gb|AES67729.1| Bifunctional protein aas
           [Medicago truncatula]
          Length = 2339

 Score = 86.3 bits (212), Expect(2) = 2e-23
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -2

Query: 135 YGYTASGYGYVQDMPYAYVHEFTRTSMAGKIH*FKGGYTSVWRRL 1
           +GYTASGYG++QDMPYAY+HEFTRTSMAGKI  FKGGYTS+W+++
Sbjct: 175 FGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQKI 219



 Score = 47.8 bits (112), Expect(2) = 2e-23
 Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
 Frame = -3

Query: 248 QDQVRDSDKIGV---SEIASDLAPLFLETHGFKSIPKSVAF 135
           Q++V++S + GV   SE+A+DL P FLE HG KSIP SVAF
Sbjct: 135 QEKVKNSGRFGVHAVSEVAADLTPEFLEHHGLKSIPNSVAF 175


Top