BLASTX nr result

ID: Cnidium21_contig00006116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006116
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS50667.1| beta-tubulin [Eucalyptus grandis]                      337   e-126
ref|XP_002510540.1| tubulin beta chain, putative [Ricinus commun...   336   e-125
ref|XP_003523477.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   336   e-125
ref|XP_003527622.1| PREDICTED: tubulin beta chain-like [Glycine ...   336   e-125
gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]                     335   e-125

>gb|ABS50667.1| beta-tubulin [Eucalyptus grandis]
          Length = 444

 Score =  337 bits (865), Expect(2) = e-126
 Identities = 163/163 (100%), Positives = 163/163 (100%)
 Frame = -3

Query: 1050 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 871
            NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA
Sbjct: 194  NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 253

Query: 870  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 691
            VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS
Sbjct: 254  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 313

Query: 690  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 562
            AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 314  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 356



 Score =  140 bits (354), Expect(2) = e-126
 Identities = 70/83 (84%), Positives = 70/83 (84%)
 Frame = -1

Query: 1361 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSD 1182
            DVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSD
Sbjct: 117  DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 176

Query: 1181 TVVEPYNATLSVHQLVENADECM 1113
            TVVEPYNATLSVHQLVENADECM
Sbjct: 177  TVVEPYNATLSVHQLVENADECM 199


>ref|XP_002510540.1| tubulin beta chain, putative [Ricinus communis]
            gi|223551241|gb|EEF52727.1| tubulin beta chain, putative
            [Ricinus communis]
          Length = 448

 Score =  336 bits (862), Expect(2) = e-125
 Identities = 162/163 (99%), Positives = 163/163 (100%)
 Frame = -3

Query: 1050 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 871
            NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA
Sbjct: 197  NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 256

Query: 870  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 691
            VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD+KNMMCAADPRHGRYLTAS
Sbjct: 257  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 316

Query: 690  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 562
            AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 317  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 359



 Score =  140 bits (354), Expect(2) = e-125
 Identities = 70/83 (84%), Positives = 70/83 (84%)
 Frame = -1

Query: 1361 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSD 1182
            DVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSD
Sbjct: 120  DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 179

Query: 1181 TVVEPYNATLSVHQLVENADECM 1113
            TVVEPYNATLSVHQLVENADECM
Sbjct: 180  TVVEPYNATLSVHQLVENADECM 202


>ref|XP_003523477.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 449

 Score =  336 bits (861), Expect(2) = e-125
 Identities = 161/163 (98%), Positives = 163/163 (100%)
 Frame = -3

Query: 1050 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 871
            NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA
Sbjct: 197  NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 256

Query: 870  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 691
            VNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQMWD+KNMMCAADPRHGRYLTAS
Sbjct: 257  VNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 316

Query: 690  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 562
            AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 317  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 359



 Score =  140 bits (354), Expect(2) = e-125
 Identities = 70/83 (84%), Positives = 70/83 (84%)
 Frame = -1

Query: 1361 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSD 1182
            DVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSD
Sbjct: 120  DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 179

Query: 1181 TVVEPYNATLSVHQLVENADECM 1113
            TVVEPYNATLSVHQLVENADECM
Sbjct: 180  TVVEPYNATLSVHQLVENADECM 202


>ref|XP_003527622.1| PREDICTED: tubulin beta chain-like [Glycine max]
          Length = 448

 Score =  336 bits (861), Expect(2) = e-125
 Identities = 161/163 (98%), Positives = 163/163 (100%)
 Frame = -3

Query: 1050 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 871
            NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA
Sbjct: 197  NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 256

Query: 870  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 691
            VNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQMWD+KNMMCAADPRHGRYLTAS
Sbjct: 257  VNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 316

Query: 690  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 562
            AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 317  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 359



 Score =  140 bits (354), Expect(2) = e-125
 Identities = 70/83 (84%), Positives = 70/83 (84%)
 Frame = -1

Query: 1361 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSD 1182
            DVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSD
Sbjct: 120  DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 179

Query: 1181 TVVEPYNATLSVHQLVENADECM 1113
            TVVEPYNATLSVHQLVENADECM
Sbjct: 180  TVVEPYNATLSVHQLVENADECM 202


>gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]
          Length = 450

 Score =  335 bits (859), Expect(2) = e-125
 Identities = 161/163 (98%), Positives = 163/163 (100%)
 Frame = -3

Query: 1050 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 871
            NADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA
Sbjct: 198  NADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLA 257

Query: 870  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTAS 691
            VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD+KNMMCAADPRHGRYLTAS
Sbjct: 258  VNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTAS 317

Query: 690  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 562
            AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 318  AMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 360



 Score =  140 bits (354), Expect(2) = e-125
 Identities = 70/83 (84%), Positives = 70/83 (84%)
 Frame = -1

Query: 1361 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSD 1182
            DVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKVSD
Sbjct: 121  DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 180

Query: 1181 TVVEPYNATLSVHQLVENADECM 1113
            TVVEPYNATLSVHQLVENADECM
Sbjct: 181  TVVEPYNATLSVHQLVENADECM 203


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