BLASTX nr result

ID: Cnidium21_contig00006112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006112
         (1383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254...   258   3e-66
ref|XP_002308277.1| single myb histone [Populus trichocarpa] gi|...   241   2e-61
ref|XP_002514135.1| DNA binding protein, putative [Ricinus commu...   238   4e-60
ref|XP_002330511.1| single myb histone [Populus trichocarpa] gi|...   136   1e-29
dbj|BAK06814.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   9e-27

>ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254369 [Vitis vinifera]
           gi|297738637|emb|CBI27882.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  258 bits (658), Expect = 3e-66
 Identities = 150/321 (46%), Positives = 182/321 (56%), Gaps = 2/321 (0%)
 Frame = +1

Query: 19  MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHHLYTRSNIDLKDKWRNMSVSA 198
           MGNPKQKWT+EEEEALRAGVAKHGTGKWKNIQKDPEFNH L+TRSNIDLKDKWRNMSVSA
Sbjct: 1   MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLFTRSNIDLKDKWRNMSVSA 60

Query: 199 GGQGPRDKSRLLKPKSESDASEASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 378
            GQGPR+KSR  K K+ +DA  A+                                    
Sbjct: 61  SGQGPREKSRTPKTKANTDAPSAATVSNPQNSSSAAPVTGD------------------- 101

Query: 379 XXXXXXXXXXXXXXMASHDALPSALVPTNDSSKCNLDVKTASKYDNMIYDALKNLNDPNG 558
                          AS DA+       +D+SK  LD K+A +Y+ MI++AL  L +PNG
Sbjct: 102 ---------------ASADAM-------DDASKNILDGKSAPRYNAMIFEALSALKEPNG 139

Query: 559 SDASAIVSFIEQKQEVPQNFXXXXXXXXXXXXXQEKLEKVHNCYRSKNDXXXXXXXXXXX 738
           SD S IVSFIEQ+ EVPQNF             Q+KLEKV NCY+ K D           
Sbjct: 140 SDTSTIVSFIEQRHEVPQNFRRLLSSRLRRLVAQDKLEKVQNCYKIKRDPSFGTKTPTPK 199

Query: 739 XXEIRPRQPQPTSYLP--DTVEXXXXXXXXXXXXXXXKESVAAEAGKESDRINKMAEDAE 912
             +IRPRQ Q T Y+   +TVE               K  VAAEA KE++R+ KMAE++E
Sbjct: 200 QKDIRPRQSQSTDYVASIETVEEAAVAAAYKVAEAENKSFVAAEAVKEAERVAKMAEESE 259

Query: 913 MLLKAAEDIFYRCSRGEIVTV 975
            +L+   +I  +CSRGE+V +
Sbjct: 260 AMLQFTLEILEKCSRGEVVYI 280


>ref|XP_002308277.1| single myb histone [Populus trichocarpa]
           gi|222854253|gb|EEE91800.1| single myb histone [Populus
           trichocarpa]
          Length = 275

 Score =  241 bits (616), Expect = 2e-61
 Identities = 143/317 (45%), Positives = 175/317 (55%)
 Frame = +1

Query: 19  MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHHLYTRSNIDLKDKWRNMSVSA 198
           MGNPKQKWT+EEEEALRAGVAKHGTGKWKNIQ+DPEFN +LY+RSNIDLKDKWRNM+VSA
Sbjct: 1   MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSA 60

Query: 199 GGQGPRDKSRLLKPKSESDASEASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 378
           G Q  +DKSR  K KS  DA+ A+                                    
Sbjct: 61  GSQSVKDKSRTTKVKSIPDAAAAA------------------------------------ 84

Query: 379 XXXXXXXXXXXXXXMASHDALPSALVPTNDSSKCNLDVKTASKYDNMIYDALKNLNDPNG 558
                          AS  A  +A V  +D S+   D KTA KY+ MI++A+   N+PNG
Sbjct: 85  -----TPLPNPQTSAASAAAAAAADVAIDDYSEAAADSKTAPKYNAMIFEAISAFNEPNG 139

Query: 559 SDASAIVSFIEQKQEVPQNFXXXXXXXXXXXXXQEKLEKVHNCYRSKNDXXXXXXXXXXX 738
           +D SAI+S+IEQ+QE+PQNF             QEKLEKV NCY+ K             
Sbjct: 140 ADTSAIISYIEQRQELPQNFRRQLSSRLRRLVAQEKLEKVQNCYKIKK-VSSFGTKTPTP 198

Query: 739 XXEIRPRQPQPTSYLPDTVEXXXXXXXXXXXXXXXKESVAAEAGKESDRINKMAEDAEML 918
             E+RP+    T    DTVE               K  VA EA KES+R++KM+EDA+ L
Sbjct: 199 KKEVRPKSVHDTG---DTVEGAANDAAYSVAEAENKSFVATEAVKESERVSKMSEDADSL 255

Query: 919 LKAAEDIFYRCSRGEIV 969
           L+ A +I  +C RGEIV
Sbjct: 256 LQLANEILEKCLRGEIV 272


>ref|XP_002514135.1| DNA binding protein, putative [Ricinus communis]
           gi|223546591|gb|EEF48089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 283

 Score =  238 bits (606), Expect = 4e-60
 Identities = 142/321 (44%), Positives = 178/321 (55%), Gaps = 2/321 (0%)
 Frame = +1

Query: 19  MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHHLYTRSNIDLKDKWRNMSVSA 198
           MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFN  L++RSNIDLKDKWRNMSVSA
Sbjct: 1   MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNPFLFSRSNIDLKDKWRNMSVSA 60

Query: 199 GGQGPRDKSRLLKPKSESDASEASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 378
           G     +KSR  KPK+ SD   A+                                    
Sbjct: 61  G-----EKSRTPKPKANSDIPPAT----------------------------------KA 81

Query: 379 XXXXXXXXXXXXXXMASHDALPSALVPTNDSSKCNLDVKTASKYDNMIYDALKNLNDPNG 558
                         + +   L  A    +DS+K   D KTA KY+ MI++A+  LN  +G
Sbjct: 82  VSPIPVSNLQSSASVITTSPLDEADPMVDDSTKTFGDAKTAPKYNAMIFEAISALNKQHG 141

Query: 559 SDASAIVSFIEQKQEVPQNFXXXXXXXXXXXXXQEKLEKVHNCYRSKNDXXXXXXXXXXX 738
           +D +AIVS+IEQ+Q VPQNF             QEKLEKV NC++ KN+           
Sbjct: 142 ADTTAIVSYIEQRQVVPQNFRRQLSSRLRRLVAQEKLEKVQNCFKIKNNSSLETKTPTPK 201

Query: 739 XXEIRPRQPQPTSYL--PDTVEXXXXXXXXXXXXXXXKESVAAEAGKESDRINKMAEDAE 912
             ++RPR  Q TS +   DT+E               K  VAAEA KE++R++KMAED +
Sbjct: 202 QKDVRPRHLQSTSCINSGDTMEEAAVAAAYRIAEAENKSFVAAEAVKEAERVSKMAEDTD 261

Query: 913 MLLKAAEDIFYRCSRGEIVTV 975
            LL+ A++IF +CSRGE+V +
Sbjct: 262 SLLQLAKEIFEKCSRGEVVLI 282


>ref|XP_002330511.1| single myb histone [Populus trichocarpa]
           gi|222872445|gb|EEF09576.1| single myb histone [Populus
           trichocarpa]
          Length = 279

 Score =  136 bits (343), Expect = 1e-29
 Identities = 63/81 (77%), Positives = 71/81 (87%)
 Frame = +1

Query: 19  MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHHLYTRSNIDLKDKWRNMSVSA 198
           MGNPKQKW +EEEEALRAG+AKHGTGKWKNIQ+DPEFN +L +RSNIDLKDKWRNM+VSA
Sbjct: 1   MGNPKQKWKSEEEEALRAGIAKHGTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSA 60

Query: 199 GGQGPRDKSRLLKPKSESDAS 261
           G Q  +DKSR LK KS  DA+
Sbjct: 61  GSQSVKDKSRTLKAKSSPDAA 81



 Score =  128 bits (322), Expect = 3e-27
 Identities = 75/182 (41%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
 Frame = +1

Query: 436 ALPSALVPTNDSSKCNLDVKTASKYDNMIYDALKNLNDPNGSDASAIVSFIEQKQEVPQN 615
           A+ +  V  +DSS+   D KTA KY+ MI++A+  LN+PNG+D SAI+S+IE++QE+PQN
Sbjct: 97  AVAAVDVVIDDSSEAAADSKTAPKYNAMIFEAISALNEPNGADTSAIISYIERRQELPQN 156

Query: 616 FXXXXXXXXXXXXXQEKLEKVHNCYRSKNDXXXXXXXXXXXXXEIRPRQPQPTSYL--PD 789
           F             QEKLEKV N Y+ K               E+RP+  Q T  +   D
Sbjct: 157 FRRQLSSRLRRLVAQEKLEKVQNFYKIKKASSFGTKTPTPKQKEVRPKPEQNTGLINSGD 216

Query: 790 TVEXXXXXXXXXXXXXXXKESVAAEAGKESDRINKMAEDAEMLLKAAEDIFYRCSRGEIV 969
           TV                K  VA EA KES+R++KMAEDA  LL+ A +I  +C RGEIV
Sbjct: 217 TVAEAADDAAYMVAEAENKSFVATEAVKESERVSKMAEDANSLLQLANEILEKCLRGEIV 276

Query: 970 TV 975
            +
Sbjct: 277 VM 278


>dbj|BAK06814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 263

 Score =  127 bits (318), Expect = 9e-27
 Identities = 79/193 (40%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
 Frame = +1

Query: 19  MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHHLYTRSNIDLKDKWRNMSVSA 198
           MG PKQKWT+EEEEALR GV KHG GKW+ IQKDPEF+  L +RSNIDLKDKWRN+S SA
Sbjct: 1   MGAPKQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEFSPVLSSRSNIDLKDKWRNLSFSA 60

Query: 199 GGQGPRDKSRLLKPKSESDASEASFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 378
            G G RDK R+ +PK+ S +   S                                    
Sbjct: 61  SGLGSRDKQRVPRPKAPSSSPSPS------------------------------------ 84

Query: 379 XXXXXXXXXXXXXXMASHDALPSALVPTNDSSKCNLDVKTASK--YDNMIYDALKNLNDP 552
                         + + +++  A  P  DS K   D KT S   Y  MI +AL  L +P
Sbjct: 85  ---------PQLLLLPAPNSVADAAPP-EDSEKSPHDDKTPSPKLYSAMILEALGELKEP 134

Query: 553 NGSDASAIVSFIE 591
           NGS+ + I +FIE
Sbjct: 135 NGSEVTTICNFIE 147


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