BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00006101
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   102   2e-20
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   102   2e-20
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...    98   6e-19
gb|ABK95931.1| unknown [Populus trichocarpa]                           97   1e-18

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
 Frame = +3

Query: 3   IYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF-----AAGLPAGATVWQNPHAA 167
           IYDGGYCKLH+SYSRHTDLNVKA SD+SRDYT+P+SG      A G P   TVWQNP AA
Sbjct: 278 IYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAA 337

Query: 168 PVFTGSEFAS 197
           P++TG + A+
Sbjct: 338 PLYTGHDAAA 347


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
 Frame = +3

Query: 3   IYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF-----AAGLPAGATVWQNPHAA 167
           IYDGGYCKLH+SYSRHTDLNVKA SD+SRDYT+P+SG      A G P   TVWQNP AA
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAA 366

Query: 168 PVFTGSEFAS 197
           P++TG + A+
Sbjct: 367 PLYTGHDAAA 376


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/69 (65%), Positives = 53/69 (76%), Gaps = 4/69 (5%)
 Frame = +3

Query: 3   IYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF----AAGLPAGATVWQNPHAAP 170
           IYDGGYCKLH+SYSRHTDLNVKAFSDKSRDYT+P++ F    A GL    T WQNP A  
Sbjct: 311 IYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAPTTWQNPQAGS 370

Query: 171 VFTGSEFAS 197
           ++ GS +A+
Sbjct: 371 MYLGSNYAT 379


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/70 (61%), Positives = 55/70 (78%), Gaps = 5/70 (7%)
 Frame = +3

Query: 3   IYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGFAA-----GLPAGATVWQNPHAA 167
           IYDGGYCKLH+SYSRHTDLNVKA+SDKSRDYT+P++   A     G+P   T+WQNP A+
Sbjct: 315 IYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQVPGVPTAPTMWQNPQAS 374

Query: 168 PVFTGSEFAS 197
           P++  + +AS
Sbjct: 375 PMYPVNSYAS 384


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/69 (62%), Positives = 54/69 (78%), Gaps = 4/69 (5%)
 Frame = +3

Query: 3   IYDGGYCKLHISYSRHTDLNVKAFSDKSRDYTVPESGF----AAGLPAGATVWQNPHAAP 170
           IYDGGYCKLH+SYSRHTDLNVKA+SDKSRDYT+P++      A GL    T+WQNP A  
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGS 366

Query: 171 VFTGSEFAS 197
           ++TG+ +A+
Sbjct: 367 MYTGNNYAT 375